RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 MIEF2Q96C03 454 aa20.7■□□□□ 0.9
PTPN12-201ENST00000248594 CCDC114Q96M63 670 aa20.7■□□□□ 0.9
PTPN12-201ENST00000248594 JADE2Q9NQC1 790 aa20.7■□□□□ 0.9
PTPN12-201ENST00000248594 NPHP4O75161 1426 aaPredicted RBP20.7■□□□□ 0.9
PTPN12-201ENST00000248594 MYO5BQ9ULV0 1848 aa20.7■□□□□ 0.9
PTPN12-201ENST00000248594 CMA1P23946 247 aa20.69■□□□□ 0.9
PTPN12-201ENST00000248594 TBC1D31Q96DN5 1066 aa20.69■□□□□ 0.9
PTPN12-201ENST00000248594 RRP36Q96EU6 259 aaKnown RBP20.69■□□□□ 0.9
PTPN12-201ENST00000248594 SETBP1Q9Y6X0 1596 aa20.69■□□□□ 0.9
PTPN12-201ENST00000248594 PDHBP11177 359 aa20.69■□□□□ 0.9
PTPN12-201ENST00000248594 METTL16Q86W50 562 aaKnown RBP20.69■□□□□ 0.9
PTPN12-201ENST00000248594 STAMQ92783 540 aa20.69■□□□□ 0.9
PTPN12-201ENST00000248594 CALR3Q96L12 384 aaKnown RBP20.69■□□□□ 0.9
PTPN12-201ENST00000248594 CRB1P82279 1406 aa20.69■□□□□ 0.9
PTPN12-201ENST00000248594 ZNF185O15231 689 aa20.69■□□□□ 0.9
PTPN12-201ENST00000248594 GPTP24298 496 aa20.69■□□□□ 0.9
PTPN12-201ENST00000248594 C2orf54Q08AI8 447 aa20.69■□□□□ 0.9
PTPN12-201ENST00000248594 VPS16Q9H269 839 aa20.69■□□□□ 0.9
PTPN12-201ENST00000248594 KCNH3Q9ULD8 1083 aa20.69■□□□□ 0.9
PTPN12-201ENST00000248594 PRPF6O94906 941 aaKnown RBP20.68■□□□□ 0.9
PTPN12-201ENST00000248594 SHC4Q6S5L8 630 aa20.68■□□□□ 0.9
PTPN12-201ENST00000248594 COG1Q8WTW3 980 aa20.68■□□□□ 0.9
PTPN12-201ENST00000248594 LLPHQ9BRT6 129 aaKnown RBP20.68■□□□□ 0.9
PTPN12-201ENST00000248594 BMP6P22004 513 aa20.68■□□□□ 0.9
PTPN12-201ENST00000248594 GCKP35557 465 aa20.68■□□□□ 0.9
PTPN12-201ENST00000248594 POLR2DO15514 142 aaKnown RBP20.68■□□□□ 0.9
PTPN12-201ENST00000248594 SEC24CP53992 1094 aa20.68■□□□□ 0.9
PTPN12-201ENST00000248594 SUCLG2Q96I99 432 aa20.68■□□□□ 0.9
PTPN12-201ENST00000248594 C3P01024 1663 aa20.67■□□□□ 0.9
PTPN12-201ENST00000248594 ALDH1L1O75891 902 aa20.67■□□□□ 0.9
PTPN12-201ENST00000248594 CDC25CP30307 473 aa20.67■□□□□ 0.9
PTPN12-201ENST00000248594 SLC9C2Q5TAH2 1124 aa20.67■□□□□ 0.9
PTPN12-201ENST00000248594 AIDAQ96BJ3 306 aa20.67■□□□□ 0.9
PTPN12-201ENST00000248594 PPFIA1Q13136 1202 aa20.67■□□□□ 0.9
PTPN12-201ENST00000248594 NEDD4P46934 1319 aa20.67■□□□□ 0.9
PTPN12-201ENST00000248594 CHUKO15111 745 aa20.66■□□□□ 0.9
PTPN12-201ENST00000248594 HPDP32754 393 aaPredicted RBP20.66■□□□□ 0.9
PTPN12-201ENST00000248594 HDGFP51858 240 aaKnown RBP20.66■□□□□ 0.9
PTPN12-201ENST00000248594 GUCY1A3Q02108 690 aa20.66■□□□□ 0.9
PTPN12-201ENST00000248594 WHAMMP3Q1A5X7 153 aa20.66■□□□□ 0.9
PTPN12-201ENST00000248594 PHKBQ93100 1093 aa20.66■□□□□ 0.9
PTPN12-201ENST00000248594 TMEM131LA2VDJ0 1609 aa20.66■□□□□ 0.9
PTPN12-201ENST00000248594 YEATS4O95619 227 aa20.66■□□□□ 0.9
PTPN12-201ENST00000248594 SF3B2Q13435 895 aaKnown RBP20.66■□□□□ 0.9
PTPN12-201ENST00000248594 MCMDC2Q4G0Z9 681 aa20.66■□□□□ 0.9
PTPN12-201ENST00000248594 ARL8AQ96BM9 186 aa20.66■□□□□ 0.9
PTPN12-201ENST00000248594 DLG5Q8TDM6 1919 aa20.66■□□□□ 0.9
PTPN12-201ENST00000248594 ADGRL3Q9HAR2 1447 aa20.66■□□□□ 0.9
PTPN12-201ENST00000248594 FXR1P51114 621 aaKnown RBP eCLIP20.66■□□□□ 0.9
PTPN12-201ENST00000248594 SLC39A6Q13433 755 aa20.66■□□□□ 0.9
PTPN12-201ENST00000248594 KLC4Q9NSK0 619 aa20.66■□□□□ 0.9
PTPN12-201ENST00000248594 SERTAD1Q9UHV2 236 aa20.66■□□□□ 0.9
PTPN12-201ENST00000248594 ZNF330Q9Y3S2 320 aaPredicted RBP20.66■□□□□ 0.9
PTPN12-201ENST00000248594 EIF3HO15372 352 aaKnown RBP eCLIP20.65■□□□□ 0.9
PTPN12-201ENST00000248594 PPARAQ07869 468 aa20.65■□□□□ 0.9
PTPN12-201ENST00000248594 KCTD19Q17RG1 926 aaPredicted RBP20.65■□□□□ 0.9
PTPN12-201ENST00000248594 E7EWF7 191 aa20.65■□□□□ 0.9
PTPN12-201ENST00000248594 APBA1Q02410 837 aa20.65■□□□□ 0.9
PTPN12-201ENST00000248594 EZH2Q15910 746 aaKnown RBP20.65■□□□□ 0.9
PTPN12-201ENST00000248594 PPANQ9NQ55 473 aaKnown RBP20.65■□□□□ 0.9
PTPN12-201ENST00000248594 MAN1B1Q9UKM7 699 aa20.65■□□□□ 0.9
PTPN12-201ENST00000248594 MACROD2A1Z1Q3 448 aa20.65■□□□□ 0.9
PTPN12-201ENST00000248594 ATP1A1P05023 1023 aaKnown RBP20.65■□□□□ 0.9
PTPN12-201ENST00000248594 TRDNQ13061 729 aa20.65■□□□□ 0.9
PTPN12-201ENST00000248594 CCDC85AQ96PX6 553 aaPredicted RBP20.65■□□□□ 0.9
PTPN12-201ENST00000248594 DBNDD2Q9BQY9 259 aa20.65■□□□□ 0.9
PTPN12-201ENST00000248594 TRIM6Q9C030 488 aaPredicted RBP20.65■□□□□ 0.9
PTPN12-201ENST00000248594 N4BP3O15049 544 aa20.64■□□□□ 0.89
PTPN12-201ENST00000248594 USP14P54578 494 aa20.64■□□□□ 0.89
PTPN12-201ENST00000248594 FILIP1LQ4L180 1135 aa20.64■□□□□ 0.89
PTPN12-201ENST00000248594 ATL3Q6DD88 541 aa20.64■□□□□ 0.89
PTPN12-201ENST00000248594 KIAA1328Q86T90 577 aa20.64■□□□□ 0.89
PTPN12-201ENST00000248594 NUTM2AQ8IVF1 878 aaPredicted RBP20.64■□□□□ 0.89
PTPN12-201ENST00000248594 COL15A1P39059 1388 aa20.64■□□□□ 0.89
PTPN12-201ENST00000248594 GOLGA6L7A0A1B0GV03 622 aa20.64■□□□□ 0.89
PTPN12-201ENST00000248594 PPP1R12AO14974 1030 aaPredicted RBP20.64■□□□□ 0.89
PTPN12-201ENST00000248594 TBX2Q13207 712 aaPredicted RBP20.64■□□□□ 0.89
PTPN12-201ENST00000248594 WASHC4Q2M389 1173 aa20.64■□□□□ 0.89
PTPN12-201ENST00000248594 EEF2KMTQ96G04 330 aa20.64■□□□□ 0.89
PTPN12-201ENST00000248594 MAPK8IP1Q9UQF2 711 aa20.64■□□□□ 0.89
PTPN12-201ENST00000248594 CCDC40Q4G0X9 1142 aa20.63■□□□□ 0.89
PTPN12-201ENST00000248594 JMYQ8N9B5 988 aa20.63■□□□□ 0.89
PTPN12-201ENST00000248594 ALG1Q9BT22 464 aa20.63■□□□□ 0.89
PTPN12-201ENST00000248594 POLR3EQ9NVU0 708 aa20.63■□□□□ 0.89
PTPN12-201ENST00000248594 SMARCAL1Q9NZC9 954 aa20.63■□□□□ 0.89
PTPN12-201ENST00000248594 EDC4Q6P2E9 1401 aaKnown RBP20.63■□□□□ 0.89
PTPN12-201ENST00000248594 CCDC122Q5T0U0 273 aa20.63■□□□□ 0.89
PTPN12-201ENST00000248594 NBPF3Q9H094 633 aa20.63■□□□□ 0.89
PTPN12-201ENST00000248594 SRCAPQ6ZRS2 3230 aa20.63■□□□□ 0.89
PTPN12-201ENST00000248594 ENO4A6NNW6 628 aa20.62■□□□□ 0.89
PTPN12-201ENST00000248594 ZPR1O75312 459 aa20.62■□□□□ 0.89
PTPN12-201ENST00000248594 GRIN1Q05586 938 aa20.62■□□□□ 0.89
PTPN12-201ENST00000248594 VPS37DQ86XT2 251 aa20.62■□□□□ 0.89
PTPN12-201ENST00000248594 CHP1Q99653 195 aa20.62■□□□□ 0.89
PTPN12-201ENST00000248594 SNRKQ9NRH2 765 aa20.62■□□□□ 0.89
PTPN12-201ENST00000248594 UBE2Q2LH0YL09 131 aa20.62■□□□□ 0.89
PTPN12-201ENST00000248594 TFCP2Q12800 502 aa20.62■□□□□ 0.89
PTPN12-201ENST00000248594 ADAMTSL3P82987 1691 aa20.62■□□□□ 0.89
PTPN12-201ENST00000248594 RIMS1Q86UR5 1692 aaKnown RBP20.62■□□□□ 0.89
PTPN12-201ENST00000248594 AGPSO00116 658 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms