RNA–Protein interactions for RNA: ENST00000242994.3

NEUROD4-201, Transcript of neuronal differentiation 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEUROD4, Length 3,953 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4-201ENST00000242994 TPTE2Q6XPS3 522 aa8.39□□□□□ -1.07
NEUROD4-201ENST00000242994 PDLIM2Q96JY6 352 aa8.39□□□□□ -1.07
NEUROD4-201ENST00000242994 HINFPQ9BQA5 517 aa8.39□□□□□ -1.07
NEUROD4-201ENST00000242994 RTL9Q8NET4 1388 aa8.39□□□□□ -1.07
NEUROD4-201ENST00000242994 BMP15O95972 392 aa8.39□□□□□ -1.07
NEUROD4-201ENST00000242994 PCCAP05165 728 aaPredicted RBP8.39□□□□□ -1.07
NEUROD4-201ENST00000242994 PPP2R3AQ06190 1150 aa8.39□□□□□ -1.07
NEUROD4-201ENST00000242994 BCCIPQ9P287 314 aaKnown RBP eCLIP8.39□□□□□ -1.07
NEUROD4-201ENST00000242994 A0A0G2JLW4 131 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 AMPD3Q01432 767 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 SPAG1Q07617 926 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 HLFQ16534 295 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 FAM98CQ17RN3 349 aaKnown RBP8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 IQCEQ6IPM2 695 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 LINC00301Q8NCQ3 95 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 GOLGA1Q92805 767 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 RMND1Q9NWS8 449 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 PODXL2Q9NZ53 605 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 LUC7L2Q9Y383 392 aaKnown RBP8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 HIBADHP31937 336 aaKnown RBP8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 KRT9P35527 623 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 PPARAQ07869 468 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 SCARF1Q14162 830 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 CTR9Q6PD62 1173 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 GIGYF2Q6Y7W6 1299 aaKnown RBP8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 STOX1Q6ZVD7 989 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 MAPKAPK5Q8IW41 473 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 FANCBQ8NB91 859 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 TDRD7Q8NHU6 1098 aaKnown RBP8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 CCDC87Q9NVE4 849 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 RCOR1Q9UKL0 485 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 MROH2AA6NES4 1674 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 CALML3P27482 149 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 DDIT3P35638 169 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 CDR1P51861 262 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 TERF1P54274 439 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 CLEC17AQ6ZS10 378 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 CCDC42Q96M95 316 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 SPAG5Q96R06 1193 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 SLF1Q9BQI6 1058 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 CCDC113Q9H0I3 377 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 PLEKHA4Q9H4M7 779 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 ZC3H13Q5T200 1668 aaKnown RBP8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 RPAP1Q9BWH6 1393 aaPredicted RBP8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 LMTK2Q8IWU2 1503 aa8.38□□□□□ -1.07
NEUROD4-201ENST00000242994 GOLGA8HP0CJ92 632 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 CMA1P23946 247 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 TXKP42681 527 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 MCAMP43121 646 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 RNASE9P60153 205 aaKnown RBP8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 TFAP4Q01664 338 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 TMEM132AQ24JP5 1023 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 MAP9Q49MG5 647 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 CCDC122Q5T0U0 273 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 GPKOWQ92917 476 aaPredicted RBP eCLIP8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 RABEP2Q9H5N1 569 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 VPS18Q9P253 973 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 WDHD1O75717 1129 aaPredicted RBP8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 CALM1P0DP23 149 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 CALM2P0DP24 149 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 CALM3P0DP25 149 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 CYLC1P35663 651 aaPredicted RBP8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 SSR1P43307 286 aaKnown RBP8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 KIF23Q02241 960 aaPredicted RBP8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 DYMQ7RTS9 669 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 MRFAP1L1Q96HT8 127 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 GPCPD1Q9NPB8 672 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 RTEL1Q9NZ71 1219 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 OGFRQ9NZT2 677 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 ZSWIM5Q9P217 1185 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 RTCBQ9Y3I0 505 aaKnown RBP8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 ZMYM6O95789 1325 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 MAP3K15Q6ZN16 1313 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 MAP2P11137 1827 aaKnown RBP8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 ARHGAP6O43182 974 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 TBC1D8BQ0IIM8 1120 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 RASGRP4Q8TDF6 673 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 GOLPH3LQ9H4A5 285 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 PIK3C2BO00750 1634 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 DIP2CQ9Y2E4 1556 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 KIAA0754O94854 1291 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 CASP1P29466 404 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 DYNLL1P63167 89 aaKnown RBP8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 CHRNDQ07001 517 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 PDE4DQ08499 809 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 CCDC144BQ3MJ40 725 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 SPECC1LQ69YQ0 1117 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 KRBA2Q6ZNG9 492 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 TEX11Q8IYF3 940 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 LCORLQ8N3X6 602 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 MLKLQ8NB16 471 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 PIGBQ92521 554 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 PIH1D3Q9NQM4 214 aaKnown RBP8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 DENND2AQ9ULE3 1009 aa8.37□□□□□ -1.07
NEUROD4-201ENST00000242994 HEG1Q9ULI3 1381 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 NBPF26B4DH59 902 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 CCNT1O60563 726 aaKnown RBP8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 GNAQP50148 359 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 KIF5AQ12840 1032 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms