RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 SHISA4Q96DD7 197 aa10.54□□□□□ -0.72
SYDE2-201ENST00000234668 KDM4FA0A1W2PPD8 638 aa10.53□□□□□ -0.72
SYDE2-201ENST00000234668 SLIT2O94813 1529 aa10.53□□□□□ -0.72
SYDE2-201ENST00000234668 VEGFAP15692 232 aaPredicted RBP10.53□□□□□ -0.72
SYDE2-201ENST00000234668 AFMP43652 599 aa10.53□□□□□ -0.72
SYDE2-201ENST00000234668 SYT10Q6XYQ8 523 aa10.53□□□□□ -0.72
SYDE2-201ENST00000234668 NOSTRINQ8IVI9 506 aa10.53□□□□□ -0.72
SYDE2-201ENST00000234668 UBR2Q8IWV8 1755 aa10.53□□□□□ -0.72
SYDE2-201ENST00000234668 ZNF512BQ96KM6 892 aaPredicted RBP10.53□□□□□ -0.72
SYDE2-201ENST00000234668 UBAC1Q9BSL1 405 aa10.53□□□□□ -0.72
SYDE2-201ENST00000234668 NACAP1Q9BZK3 213 aa10.53□□□□□ -0.72
SYDE2-201ENST00000234668 V9GY48 417 aaPredicted RBP10.53□□□□□ -0.72
SYDE2-201ENST00000234668 ERICH2A1L162 156 aa10.53□□□□□ -0.72
SYDE2-201ENST00000234668 SMTNL1A8MU46 457 aa10.53□□□□□ -0.72
SYDE2-201ENST00000234668 ZBTB22O15209 634 aa10.53□□□□□ -0.72
SYDE2-201ENST00000234668 SFPQP23246 707 aaKnown RBP eCLIP10.53□□□□□ -0.72
SYDE2-201ENST00000234668 PPARAQ07869 468 aa10.53□□□□□ -0.72
SYDE2-201ENST00000234668 FAM47AQ5JRC9 791 aa10.53□□□□□ -0.72
SYDE2-201ENST00000234668 KLHL10Q6JEL2 608 aa10.53□□□□□ -0.72
SYDE2-201ENST00000234668 ZNF654Q8IZM8 581 aa10.53□□□□□ -0.72
SYDE2-201ENST00000234668 FANCBQ8NB91 859 aa10.53□□□□□ -0.72
SYDE2-201ENST00000234668 CELF1Q92879 486 aaKnown RBP10.53□□□□□ -0.72
SYDE2-201ENST00000234668 ZBTB9Q96C00 473 aa10.53□□□□□ -0.72
SYDE2-201ENST00000234668 PARP4Q9UKK3 1724 aaKnown RBP10.53□□□□□ -0.72
SYDE2-201ENST00000234668 PLEKHA8P1O95397 391 aa10.52□□□□□ -0.72
SYDE2-201ENST00000234668 FMNL1O95466 1100 aaPredicted RBP10.52□□□□□ -0.72
SYDE2-201ENST00000234668 STX17P56962 302 aa10.52□□□□□ -0.72
SYDE2-201ENST00000234668 RBM6P78332 1123 aaKnown RBP10.52□□□□□ -0.72
SYDE2-201ENST00000234668 SAFBQ15424 915 aaKnown RBP eCLIP10.52□□□□□ -0.72
SYDE2-201ENST00000234668 SGMS1Q86VZ5 419 aa10.52□□□□□ -0.72
SYDE2-201ENST00000234668 CRACR2BQ8N4Y2 399 aaPredicted RBP10.52□□□□□ -0.72
SYDE2-201ENST00000234668 HPSEQ9Y251 543 aa10.52□□□□□ -0.72
SYDE2-201ENST00000234668 TNKSO95271 1327 aa10.52□□□□□ -0.73
SYDE2-201ENST00000234668 ADAMTS3O15072 1205 aa10.52□□□□□ -0.73
SYDE2-201ENST00000234668 CTIFO43310 598 aaKnown RBP10.52□□□□□ -0.73
SYDE2-201ENST00000234668 NTSR2O95665 410 aa10.52□□□□□ -0.73
SYDE2-201ENST00000234668 FMR1Q06787 632 aaKnown RBP eCLIP10.52□□□□□ -0.736e-9■■■■■ 31.1
SYDE2-201ENST00000234668 RESP18Q5W5W9 173 aa10.52□□□□□ -0.73
SYDE2-201ENST00000234668 KRBA2Q6ZNG9 492 aa10.52□□□□□ -0.73
SYDE2-201ENST00000234668 HOMER1Q86YM7 354 aa10.52□□□□□ -0.73
SYDE2-201ENST00000234668 CREBRFQ8IUR6 639 aa10.52□□□□□ -0.73
SYDE2-201ENST00000234668 TRIM22Q8IYM9 498 aa10.52□□□□□ -0.73
SYDE2-201ENST00000234668 SMYD4Q8IYR2 804 aaPredicted RBP10.52□□□□□ -0.73
SYDE2-201ENST00000234668 EPSTI1Q96J88 318 aa10.52□□□□□ -0.73
SYDE2-201ENST00000234668 MAGEB6P1A0A0J9YX57 407 aa10.52□□□□□ -0.73
SYDE2-201ENST00000234668 MMP1P03956 469 aa10.52□□□□□ -0.73
SYDE2-201ENST00000234668 CYP2D6P10635 497 aa10.52□□□□□ -0.73
SYDE2-201ENST00000234668 IFNAR1P17181 557 aa10.52□□□□□ -0.73
SYDE2-201ENST00000234668 LIFRP42702 1097 aa10.52□□□□□ -0.73
SYDE2-201ENST00000234668 KLHL34Q8N239 644 aa10.52□□□□□ -0.73
SYDE2-201ENST00000234668 JMYQ8N9B5 988 aa10.52□□□□□ -0.73
SYDE2-201ENST00000234668 KRI1Q8N9T8 703 aaKnown RBP10.52□□□□□ -0.73
SYDE2-201ENST00000234668 KRT23Q9C075 422 aa10.52□□□□□ -0.73
SYDE2-201ENST00000234668 XIRP1Q702N8 1843 aaKnown RBP10.52□□□□□ -0.73
SYDE2-201ENST00000234668 CDK11BP21127 795 aaKnown RBP10.51□□□□□ -0.73
SYDE2-201ENST00000234668 SART3Q15020 963 aaKnown RBP10.51□□□□□ -0.73
SYDE2-201ENST00000234668 ZNF174Q15697 407 aa10.51□□□□□ -0.73
SYDE2-201ENST00000234668 TICAM2Q86XR7 235 aa10.51□□□□□ -0.73
SYDE2-201ENST00000234668 ZNF384Q8TF68 577 aa10.51□□□□□ -0.73
SYDE2-201ENST00000234668 DHX58Q96C10 678 aa10.51□□□□□ -0.73
SYDE2-201ENST00000234668 CSRNP2Q9H175 543 aa10.51□□□□□ -0.73
SYDE2-201ENST00000234668 SRP68Q9UHB9 627 aaKnown RBP10.51□□□□□ -0.73
SYDE2-201ENST00000234668 ABCC12Q96J65 1359 aa10.51□□□□□ -0.73
SYDE2-201ENST00000234668 ABCC6O95255 1503 aa10.51□□□□□ -0.73
SYDE2-201ENST00000234668 SHANK3Q9BYB0 1731 aa10.51□□□□□ -0.73
SYDE2-201ENST00000234668 USP17L12C9JPN9 530 aa10.51□□□□□ -0.73
SYDE2-201ENST00000234668 USP17L21D6R901 530 aa10.51□□□□□ -0.73
SYDE2-201ENST00000234668 PPP6R2O75170 966 aa10.51□□□□□ -0.73
SYDE2-201ENST00000234668 ADKP55263 362 aaKnown RBP10.51□□□□□ -0.73
SYDE2-201ENST00000234668 ALX1Q15699 326 aa10.51□□□□□ -0.73
SYDE2-201ENST00000234668 OLFM4Q6UX06 510 aa10.51□□□□□ -0.73
SYDE2-201ENST00000234668 PPP1R13BQ96KQ4 1090 aa10.51□□□□□ -0.73
SYDE2-201ENST00000234668 SAMSN1Q9NSI8 373 aaKnown RBP10.51□□□□□ -0.73
SYDE2-201ENST00000234668 AATFQ9NY61 560 aaKnown RBP eCLIP10.51□□□□□ -0.73
SYDE2-201ENST00000234668 CDC25AP30304 524 aa10.5□□□□□ -0.73
SYDE2-201ENST00000234668 TPM4P67936 248 aa10.5□□□□□ -0.73
SYDE2-201ENST00000234668 PIP4K2BP78356 416 aa10.5□□□□□ -0.73
SYDE2-201ENST00000234668 MYL5Q02045 173 aa10.5□□□□□ -0.73
SYDE2-201ENST00000234668 ELF2Q15723 593 aa10.5□□□□□ -0.73
SYDE2-201ENST00000234668 NYAP1Q6ZVC0 841 aa10.5□□□□□ -0.73
SYDE2-201ENST00000234668 ENAHQ8N8S7 591 aaPredicted RBP10.5□□□□□ -0.73
SYDE2-201ENST00000234668 ANKRD7Q92527 254 aa10.5□□□□□ -0.73
SYDE2-201ENST00000234668 TUBE1Q9UJT0 475 aa10.5□□□□□ -0.73
SYDE2-201ENST00000234668 WDR19Q8NEZ3 1342 aa10.5□□□□□ -0.73
SYDE2-201ENST00000234668 A0A087X0B3 334 aa10.5□□□□□ -0.73
SYDE2-201ENST00000234668 CUTAO60888 179 aa10.5□□□□□ -0.73
SYDE2-201ENST00000234668 AKAP17AQ02040 695 aaKnown RBP10.5□□□□□ -0.73
SYDE2-201ENST00000234668 MTERF4Q7Z6M4 381 aaKnown RBP10.5□□□□□ -0.73
SYDE2-201ENST00000234668 ANKRD18AQ8IVF6 992 aa10.5□□□□□ -0.73
SYDE2-201ENST00000234668 CPLX3Q8WVH0 158 aa10.5□□□□□ -0.73
SYDE2-201ENST00000234668 STAG1Q8WVM7 1258 aa10.5□□□□□ -0.73
SYDE2-201ENST00000234668 CNNM2Q9H8M5 875 aa10.5□□□□□ -0.73
SYDE2-201ENST00000234668 MAN1B1Q9UKM7 699 aa10.5□□□□□ -0.73
SYDE2-201ENST00000234668 ZHX1Q9UKY1 873 aaPredicted RBP10.5□□□□□ -0.73
SYDE2-201ENST00000234668 PAXBP1Q9Y5B6 917 aa10.5□□□□□ -0.73
SYDE2-201ENST00000234668 TXNRD3Q86VQ6 643 aa10.5□□□□□ -0.73
SYDE2-201ENST00000234668 GPR101Q96P66 508 aaPredicted RBP10.5□□□□□ -0.73
SYDE2-201ENST00000234668 OSBPL5Q9H0X9 879 aaPredicted RBP10.5□□□□□ -0.73
SYDE2-201ENST00000234668 INTS13Q9NVM9 706 aa10.5□□□□□ -0.73
SYDE2-201ENST00000234668 DNAI1Q9UI46 699 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms