RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 CABP2Q9NPB3 220 aa14.68□□□□□ -0.06
MSH2-201ENST00000233146 MYO1AQ9UBC5 1043 aa14.68□□□□□ -0.06
MSH2-201ENST00000233146 DNM1LO00429 736 aa14.68□□□□□ -0.06
MSH2-201ENST00000233146 HDGFP51858 240 aaKnown RBP14.68□□□□□ -0.06
MSH2-201ENST00000233146 CCDC121Q6ZUS5 278 aa14.68□□□□□ -0.06
MSH2-201ENST00000233146 G2E3Q7L622 706 aa14.68□□□□□ -0.06
MSH2-201ENST00000233146 GSPT2Q8IYD1 628 aaKnown RBP14.68□□□□□ -0.06
MSH2-201ENST00000233146 CCT8L2Q96SF2 557 aa14.68□□□□□ -0.06
MSH2-201ENST00000233146 SUDS3Q9H7L9 328 aaPredicted RBP14.68□□□□□ -0.06
MSH2-201ENST00000233146 PCDHGA4Q9Y5G9 962 aa14.68□□□□□ -0.06
MSH2-201ENST00000233146 TET3O43151 1660 aa14.68□□□□□ -0.06
MSH2-201ENST00000233146 NBPF7P0C2Y1 421 aaPredicted RBP14.68□□□□□ -0.06
MSH2-201ENST00000233146 ARL8AQ96BM9 186 aa14.68□□□□□ -0.06
MSH2-201ENST00000233146 NUP58Q9BVL2 599 aa14.68□□□□□ -0.06
MSH2-201ENST00000233146 YIPF3Q9GZM5 350 aa14.68□□□□□ -0.06
MSH2-201ENST00000233146 SIL1Q9H173 461 aa14.68□□□□□ -0.06
MSH2-201ENST00000233146 C19orf44Q9H6X5 657 aa14.68□□□□□ -0.06
MSH2-201ENST00000233146 RIPOR2Q9Y4F9 1068 aa14.68□□□□□ -0.06
MSH2-201ENST00000233146 USP42Q9H9J4 1324 aaKnown RBP14.67□□□□□ -0.06
MSH2-201ENST00000233146 KDM6AO15550 1401 aaPredicted RBP14.67□□□□□ -0.06
MSH2-201ENST00000233146 KIF1BO60333 1816 aa14.67□□□□□ -0.06
MSH2-201ENST00000233146 SPDYE3A6NKU9 549 aa14.67□□□□□ -0.06
MSH2-201ENST00000233146 LIN7AO14910 233 aaPredicted RBP14.67□□□□□ -0.06
MSH2-201ENST00000233146 EMC10Q5UCC4 262 aa14.67□□□□□ -0.06
MSH2-201ENST00000233146 SPATA21Q7Z572 469 aa14.67□□□□□ -0.06
MSH2-201ENST00000233146 MYCBPAPQ8TBZ2 947 aa14.67□□□□□ -0.06
MSH2-201ENST00000233146 FAM184BQ9ULE4 1060 aa14.67□□□□□ -0.06
MSH2-201ENST00000233146 C15orf41Q9Y2V0 281 aa14.67□□□□□ -0.06
MSH2-201ENST00000233146 CHL1O00533 1208 aa14.67□□□□□ -0.06
MSH2-201ENST00000233146 CDKL5O76039 1030 aa14.67□□□□□ -0.06
MSH2-201ENST00000233146 SETSIPP0DME0 302 aa14.67□□□□□ -0.06
MSH2-201ENST00000233146 PYGBP11216 843 aa14.67□□□□□ -0.06
MSH2-201ENST00000233146 HDLBPQ00341 1268 aaKnown RBP14.67□□□□□ -0.06
MSH2-201ENST00000233146 SLMAPQ14BN4 828 aa14.67□□□□□ -0.06
MSH2-201ENST00000233146 PTGISQ16647 500 aa14.67□□□□□ -0.06
MSH2-201ENST00000233146 RHPN1Q8TCX5 695 aa14.67□□□□□ -0.06
MSH2-201ENST00000233146 SSH3Q8TE77 659 aa14.67□□□□□ -0.06
MSH2-201ENST00000233146 C14orf93Q9H972 538 aaKnown RBP14.67□□□□□ -0.06
MSH2-201ENST00000233146 RGL1Q9NZL6 768 aa14.67□□□□□ -0.06
MSH2-201ENST00000233146 TTF2Q9UNY4 1162 aaKnown RBP14.67□□□□□ -0.06
MSH2-201ENST00000233146 CEMIPQ8WUJ3 1361 aa14.66□□□□□ -0.06
MSH2-201ENST00000233146 AKR1B15C9JRZ8 316 aaPredicted RBP14.66□□□□□ -0.06
MSH2-201ENST00000233146 PPFIA3O75145 1194 aa14.66□□□□□ -0.06
MSH2-201ENST00000233146 ZMYND10O75800 440 aa14.66□□□□□ -0.06
MSH2-201ENST00000233146 HHATQ5VTY9 493 aa14.66□□□□□ -0.06
MSH2-201ENST00000233146 TRAPPC11Q7Z392 1133 aa14.66□□□□□ -0.06
MSH2-201ENST00000233146 NLRP14Q86W24 1093 aa14.66□□□□□ -0.06
MSH2-201ENST00000233146 RBM12BQ8IXT5 1001 aaKnown RBP14.66□□□□□ -0.06
MSH2-201ENST00000233146 STAMBPL1Q96FJ0 436 aa14.66□□□□□ -0.06
MSH2-201ENST00000233146 ANAPC4Q9UJX5 808 aa14.66□□□□□ -0.06
MSH2-201ENST00000233146 TAF6LQ9Y6J9 622 aa14.66□□□□□ -0.06
MSH2-201ENST00000233146 OPLAHO14841 1288 aa14.66□□□□□ -0.06
MSH2-201ENST00000233146 ATP6V1G2O95670 118 aa14.66□□□□□ -0.06
MSH2-201ENST00000233146 ABL1P00519 1130 aa14.66□□□□□ -0.06
MSH2-201ENST00000233146 PAPOLAP51003 745 aaKnown RBP14.66□□□□□ -0.06
MSH2-201ENST00000233146 MYO1EQ12965 1108 aa14.66□□□□□ -0.06
MSH2-201ENST00000233146 NBPF14Q5TI25 921 aa14.66□□□□□ -0.06
MSH2-201ENST00000233146 KDM7AQ6ZMT4 941 aa14.66□□□□□ -0.06
MSH2-201ENST00000233146 TAX1BP1Q86VP1 789 aa14.66□□□□□ -0.06
MSH2-201ENST00000233146 B4GALNT2Q8NHY0 566 aa14.66□□□□□ -0.06
MSH2-201ENST00000233146 PIK3R5Q8WYR1 880 aa14.66□□□□□ -0.06
MSH2-201ENST00000233146 OSBPL7Q9BZF2 842 aa14.66□□□□□ -0.06
MSH2-201ENST00000233146 NOD2Q9HC29 1040 aa14.66□□□□□ -0.06
MSH2-201ENST00000233146 SRRM3A6NNA2 597 aaPredicted RBP14.66□□□□□ -0.06
MSH2-201ENST00000233146 ROR2Q01974 943 aaKnown RBP14.66□□□□□ -0.06
MSH2-201ENST00000233146 CCDC96Q2M329 555 aa14.66□□□□□ -0.06
MSH2-201ENST00000233146 SPRED3Q2MJR0 410 aa14.66□□□□□ -0.06
MSH2-201ENST00000233146 ANKRD20A8PQ5CZ79 823 aa14.66□□□□□ -0.06
MSH2-201ENST00000233146 CADPS2Q86UW7 1296 aa14.66□□□□□ -0.06
MSH2-201ENST00000233146 LINC00301Q8NCQ3 95 aa14.66□□□□□ -0.06
MSH2-201ENST00000233146 TBC1D5Q92609 795 aa14.66□□□□□ -0.06
MSH2-201ENST00000233146 LLPHQ9BRT6 129 aaKnown RBP14.66□□□□□ -0.06
MSH2-201ENST00000233146 FAM107AO95990 144 aa14.65□□□□□ -0.06
MSH2-201ENST00000233146 LINGO3P0C6S8 592 aa14.65□□□□□ -0.06
MSH2-201ENST00000233146 GCLCP48506 637 aaPredicted RBP14.65□□□□□ -0.06
MSH2-201ENST00000233146 CRELD2Q6UXH1 353 aaPredicted RBP14.65□□□□□ -0.06
MSH2-201ENST00000233146 UBE3BQ7Z3V4 1068 aa14.65□□□□□ -0.06
MSH2-201ENST00000233146 CUL5Q93034 780 aa14.65□□□□□ -0.06
MSH2-201ENST00000233146 MMS19Q96T76 1030 aa14.65□□□□□ -0.06
MSH2-201ENST00000233146 EPAS1Q99814 870 aa14.65□□□□□ -0.06
MSH2-201ENST00000233146 MMTAG2Q9BU76 263 aaKnown RBP14.65□□□□□ -0.06
MSH2-201ENST00000233146 HOOK1Q9UJC3 728 aaKnown RBP14.65□□□□□ -0.06
MSH2-201ENST00000233146 MAP3K5Q99683 1374 aa14.65□□□□□ -0.06
MSH2-201ENST00000233146 BUB1BO60566 1050 aaPredicted RBP14.65□□□□□ -0.06
MSH2-201ENST00000233146 PPP1R37O75864 691 aa14.65□□□□□ -0.06
MSH2-201ENST00000233146 GLRX3O76003 335 aaKnown RBP14.65□□□□□ -0.06
MSH2-201ENST00000233146 FERP16591 822 aa14.65□□□□□ -0.06
MSH2-201ENST00000233146 NUP133Q8WUM0 1156 aa14.65□□□□□ -0.06
MSH2-201ENST00000233146 RNPC3Q96LT9 517 aaKnown RBP14.65□□□□□ -0.06
MSH2-201ENST00000233146 KDRP35968 1356 aa14.65□□□□□ -0.06
MSH2-201ENST00000233146 A6NHS1 94 aa14.64□□□□□ -0.07
MSH2-201ENST00000233146 ABCD1P33897 745 aa14.64□□□□□ -0.07
MSH2-201ENST00000233146 RPGRIP1Q96KN7 1286 aa14.64□□□□□ -0.07
MSH2-201ENST00000233146 ALS2CR12Q96Q35 445 aa14.64□□□□□ -0.07
MSH2-201ENST00000233146 TSGA10Q9BZW7 698 aa14.64□□□□□ -0.07
MSH2-201ENST00000233146 MIS18AQ9NYP9 233 aa14.64□□□□□ -0.07
MSH2-201ENST00000233146 ZNF232Q9UNY5 417 aa14.64□□□□□ -0.07
MSH2-201ENST00000233146 ATP1A2P50993 1020 aa14.64□□□□□ -0.07
MSH2-201ENST00000233146 LACTB2Q53H82 288 aaPredicted RBP14.64□□□□□ -0.07
MSH2-201ENST00000233146 ALS2CLQ60I27 953 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 281.7 ms