RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 CPLX2Q6PUV4 134 aaKnown RBP16.09■□□□□ 0.17
PCDHB3-201ENST00000231130 PPFIBP1Q86W92 1011 aa16.09■□□□□ 0.17
PCDHB3-201ENST00000231130 TMEM139Q8IV31 216 aa16.09■□□□□ 0.17
PCDHB3-201ENST00000231130 CCDC151A5D8V7 595 aa16.08■□□□□ 0.17
PCDHB3-201ENST00000231130 GPAA1O43292 621 aa16.08■□□□□ 0.17
PCDHB3-201ENST00000231130 LRCH2Q5VUJ6 765 aa16.08■□□□□ 0.17
PCDHB3-201ENST00000231130 SMARCC1Q92922 1105 aaPredicted RBP16.08■□□□□ 0.17
PCDHB3-201ENST00000231130 UBXN6Q9BZV1 441 aa16.08■□□□□ 0.17
PCDHB3-201ENST00000231130 KCNH5Q8NCM2 988 aa16.08■□□□□ 0.16
PCDHB3-201ENST00000231130 ACBD3Q9H3P7 528 aa16.08■□□□□ 0.16
PCDHB3-201ENST00000231130 C19orf44Q9H6X5 657 aa16.08■□□□□ 0.16
PCDHB3-201ENST00000231130 PIK3C2AO00443 1686 aa16.07■□□□□ 0.16
PCDHB3-201ENST00000231130 KIF5CO60282 957 aa16.07■□□□□ 0.16
PCDHB3-201ENST00000231130 ABL1P00519 1130 aa16.07■□□□□ 0.16
PCDHB3-201ENST00000231130 SNRPA1P09661 255 aaKnown RBP16.07■□□□□ 0.16
PCDHB3-201ENST00000231130 CCDC175P0C221 793 aa16.07■□□□□ 0.16
PCDHB3-201ENST00000231130 USP49Q70CQ1 688 aa16.07■□□□□ 0.16
PCDHB3-201ENST00000231130 PNKPQ96T60 521 aa16.07■□□□□ 0.16
PCDHB3-201ENST00000231130 SLC24A3Q9HC58 644 aa16.07■□□□□ 0.16
PCDHB3-201ENST00000231130 TUBE1Q9UJT0 475 aa16.07■□□□□ 0.16
PCDHB3-201ENST00000231130 TBX22Q9Y458 520 aa16.07■□□□□ 0.16
PCDHB3-201ENST00000231130 PALLDQ8WX93 1383 aa16.07■□□□□ 0.16
PCDHB3-201ENST00000231130 CCT6AP40227 531 aaKnown RBP16.07■□□□□ 0.16
PCDHB3-201ENST00000231130 AKAP17AQ02040 695 aaKnown RBP16.07■□□□□ 0.16
PCDHB3-201ENST00000231130 IQUBQ8NA54 791 aa16.07■□□□□ 0.16
PCDHB3-201ENST00000231130 ACRBPQ8NEB7 543 aa16.07■□□□□ 0.16
PCDHB3-201ENST00000231130 SLC52A2Q9HAB3 445 aa16.07■□□□□ 0.16
PCDHB3-201ENST00000231130 MAN1B1Q9UKM7 699 aa16.07■□□□□ 0.16
PCDHB3-201ENST00000231130 PLEKHG1Q9ULL1 1385 aa16.07■□□□□ 0.16
PCDHB3-201ENST00000231130 SCP2P22307 547 aa16.07■□□□□ 0.16
PCDHB3-201ENST00000231130 KCNJ6P48051 423 aa16.07■□□□□ 0.16
PCDHB3-201ENST00000231130 CRYBG1Q9Y4K1 1723 aa16.07■□□□□ 0.16
PCDHB3-201ENST00000231130 DIP2BQ9P265 1576 aa16.06■□□□□ 0.16
PCDHB3-201ENST00000231130 GOLGA8AA7E2F4 631 aa16.06■□□□□ 0.16
PCDHB3-201ENST00000231130 STX10O60499 249 aa16.06■□□□□ 0.16
PCDHB3-201ENST00000231130 A1BGP04217 495 aa16.06■□□□□ 0.16
PCDHB3-201ENST00000231130 ATP2B2Q01814 1243 aa16.06■□□□□ 0.16
PCDHB3-201ENST00000231130 BRD3Q15059 726 aa16.06■□□□□ 0.16
PCDHB3-201ENST00000231130 CYB5R4Q7L1T6 521 aa16.06■□□□□ 0.16
PCDHB3-201ENST00000231130 NALCNQ8IZF0 1738 aa16.06■□□□□ 0.16
PCDHB3-201ENST00000231130 AGLP35573 1532 aa16.06■□□□□ 0.16
PCDHB3-201ENST00000231130 EYA2O00167 538 aa16.06■□□□□ 0.16
PCDHB3-201ENST00000231130 EBAG9O00559 213 aa16.06■□□□□ 0.16
PCDHB3-201ENST00000231130 PPFIA4O75335 1185 aa16.06■□□□□ 0.16
PCDHB3-201ENST00000231130 SATB1Q01826 763 aa16.06■□□□□ 0.16
PCDHB3-201ENST00000231130 RBL2Q08999 1139 aa16.06■□□□□ 0.16
PCDHB3-201ENST00000231130 POSTNQ15063 836 aa16.06■□□□□ 0.16
PCDHB3-201ENST00000231130 MB21D2Q8IYB1 491 aaPredicted RBP16.06■□□□□ 0.16
PCDHB3-201ENST00000231130 IGSF22Q8N9C0 903 aa16.06■□□□□ 0.16
PCDHB3-201ENST00000231130 NUP133Q8WUM0 1156 aa16.06■□□□□ 0.16
PCDHB3-201ENST00000231130 XAGE2Q96GT9 111 aa16.06■□□□□ 0.16
PCDHB3-201ENST00000231130 CARD10Q9BWT7 1032 aa16.06■□□□□ 0.16
PCDHB3-201ENST00000231130 LRRC37A3O60309 1634 aa16.06■□□□□ 0.16
PCDHB3-201ENST00000231130 hCG_1642624A0A1W2PR95 340 aa16.06■□□□□ 0.16
PCDHB3-201ENST00000231130 NEBLO76041 1014 aa16.06■□□□□ 0.16
PCDHB3-201ENST00000231130 HNRNPH1P31943 449 aaKnown RBP16.06■□□□□ 0.16
PCDHB3-201ENST00000231130 IL15P40933 162 aaPredicted RBP16.06■□□□□ 0.16
PCDHB3-201ENST00000231130 SLC9C2Q5TAH2 1124 aa16.06■□□□□ 0.16
PCDHB3-201ENST00000231130 RAD9BQ6WBX8 426 aa16.06■□□□□ 0.16
PCDHB3-201ENST00000231130 CHD2O14647 1828 aaKnown RBP16.05■□□□□ 0.16
PCDHB3-201ENST00000231130 AKR1B15C9JRZ8 316 aaPredicted RBP16.05■□□□□ 0.16
PCDHB3-201ENST00000231130 CCDC57Q2TAC2 916 aa16.05■□□□□ 0.16
PCDHB3-201ENST00000231130 RSRC2Q7L4I2 434 aaKnown RBP16.05■□□□□ 0.16
PCDHB3-201ENST00000231130 SLC35F6Q8N357 371 aa16.05■□□□□ 0.16
PCDHB3-201ENST00000231130 KIFC2Q96AC6 838 aa16.05■□□□□ 0.16
PCDHB3-201ENST00000231130 ZMYND10O75800 440 aa16.05■□□□□ 0.16
PCDHB3-201ENST00000231130 CDC25AP30304 524 aa16.05■□□□□ 0.16
PCDHB3-201ENST00000231130 EIF5P55010 431 aaKnown RBP16.05■□□□□ 0.16
PCDHB3-201ENST00000231130 NR5A1Q13285 461 aa16.05■□□□□ 0.16
PCDHB3-201ENST00000231130 AFAP1L1Q8TED9 768 aa16.05■□□□□ 0.16
PCDHB3-201ENST00000231130 CEP89Q96ST8 783 aa16.05■□□□□ 0.16
PCDHB3-201ENST00000231130 HOOK1Q9UJC3 728 aaKnown RBP16.05■□□□□ 0.16
PCDHB3-201ENST00000231130 ANGEL1Q9UNK9 670 aaKnown RBP16.05■□□□□ 0.16
PCDHB3-201ENST00000231130 NCAPD2Q15021 1401 aa16.05■□□□□ 0.16
PCDHB3-201ENST00000231130 ANKARQ7Z5J8 1434 aa16.05■□□□□ 0.16
PCDHB3-201ENST00000231130 ZBTB43O43298 467 aa16.04■□□□□ 0.16
PCDHB3-201ENST00000231130 GUCY1A2P33402 732 aa16.04■□□□□ 0.16
PCDHB3-201ENST00000231130 CABP4P57796 275 aa16.04■□□□□ 0.16
PCDHB3-201ENST00000231130 FOXO4P98177 505 aa16.04■□□□□ 0.16
PCDHB3-201ENST00000231130 KRI1Q8N9T8 703 aaKnown RBP16.04■□□□□ 0.16
PCDHB3-201ENST00000231130 FOXP2O15409 715 aa16.04■□□□□ 0.16
PCDHB3-201ENST00000231130 CUTAO60888 179 aa16.04■□□□□ 0.16
PCDHB3-201ENST00000231130 CASP8Q14790 479 aa16.04■□□□□ 0.16
PCDHB3-201ENST00000231130 PTPAQ15257 358 aa16.04■□□□□ 0.16
PCDHB3-201ENST00000231130 CHRNA2Q15822 529 aa16.04■□□□□ 0.16
PCDHB3-201ENST00000231130 TMEM67Q5HYA8 995 aa16.04■□□□□ 0.16
PCDHB3-201ENST00000231130 TTC19Q6DKK2 380 aaPredicted RBP16.04■□□□□ 0.16
PCDHB3-201ENST00000231130 SUGP1Q8IWZ8 645 aaKnown RBP16.04■□□□□ 0.16
PCDHB3-201ENST00000231130 TEX13AQ9BXU3 409 aaPredicted RBP16.04■□□□□ 0.16
PCDHB3-201ENST00000231130 BCCIPQ9P287 314 aaKnown RBP eCLIP16.04■□□□□ 0.16
PCDHB3-201ENST00000231130 FRMD3A2A2Y4 597 aa16.04■□□□□ 0.16
PCDHB3-201ENST00000231130 GOLGA6L9A6NEM1 432 aa16.04■□□□□ 0.16
PCDHB3-201ENST00000231130 CASP14P31944 242 aa16.04■□□□□ 0.16
PCDHB3-201ENST00000231130 RABL6Q3YEC7 729 aaPredicted RBP16.04■□□□□ 0.16
PCDHB3-201ENST00000231130 RESP18Q5W5W9 173 aa16.04■□□□□ 0.16
PCDHB3-201ENST00000231130 SRGAP1Q7Z6B7 1085 aa16.04■□□□□ 0.16
PCDHB3-201ENST00000231130 TBC1D10CQ8IV04 446 aa16.04■□□□□ 0.16
PCDHB3-201ENST00000231130 SEC31BQ9NQW1 1179 aa16.04■□□□□ 0.16
PCDHB3-201ENST00000231130 CWC25Q9NXE8 425 aaPredicted RBP16.04■□□□□ 0.16
PCDHB3-201ENST00000231130 MAPK8IP1Q9UQF2 711 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms