RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 CCAR2Q8N163 923 aaKnown RBP6.46□□□□□ -1.37
RFX4-201ENST00000229387 ALS2CR12Q96Q35 445 aa6.46□□□□□ -1.37
RFX4-201ENST00000229387 BARX2Q9UMQ3 279 aaPredicted RBP6.46□□□□□ -1.37
RFX4-201ENST00000229387 PCDHGC5Q9Y5F6 944 aa6.46□□□□□ -1.37
RFX4-201ENST00000229387 FAM169AQ9Y6X4 670 aa6.46□□□□□ -1.37
RFX4-201ENST00000229387 RTL1A6NKG5 1358 aa6.46□□□□□ -1.37
RFX4-201ENST00000229387 ERICH2A1L162 156 aa6.46□□□□□ -1.38
RFX4-201ENST00000229387 CDC45O75419 566 aa6.46□□□□□ -1.38
RFX4-201ENST00000229387 SEC31AO94979 1220 aaKnown RBP6.46□□□□□ -1.38
RFX4-201ENST00000229387 DSG2Q14126 1118 aa6.46□□□□□ -1.38
RFX4-201ENST00000229387 BRD3Q15059 726 aa6.46□□□□□ -1.38
RFX4-201ENST00000229387 TTC22Q5TAA0 569 aa6.46□□□□□ -1.38
RFX4-201ENST00000229387 C16orf87Q6PH81 154 aa6.46□□□□□ -1.38
RFX4-201ENST00000229387 SLC30A9Q6PML9 568 aa6.46□□□□□ -1.38
RFX4-201ENST00000229387 LRRC8AQ8IWT6 810 aa6.46□□□□□ -1.38
RFX4-201ENST00000229387 MYOCDQ8IZQ8 938 aa6.46□□□□□ -1.38
RFX4-201ENST00000229387 FAM71BQ8TC56 605 aa6.46□□□□□ -1.38
RFX4-201ENST00000229387 UPF3BQ9BZI7 483 aaKnown RBP6.46□□□□□ -1.38
RFX4-201ENST00000229387 INCENPQ9NQS7 918 aa6.46□□□□□ -1.38
RFX4-201ENST00000229387 VPS18Q9P253 973 aa6.46□□□□□ -1.38
RFX4-201ENST00000229387 PA2G4Q9UQ80 394 aaKnown RBP6.46□□□□□ -1.38
RFX4-201ENST00000229387 PIK3R4Q99570 1358 aa6.46□□□□□ -1.38
RFX4-201ENST00000229387 OVOS2A0A0J9YW53 1432 aa6.46□□□□□ -1.38
RFX4-201ENST00000229387 OVOS2Q6IE36 1432 aa6.46□□□□□ -1.38
RFX4-201ENST00000229387 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.46□□□□□ -1.38
RFX4-201ENST00000229387 BTBD11A6QL63 1104 aa6.46□□□□□ -1.38
RFX4-201ENST00000229387 SHOX2O60902 331 aaPredicted RBP6.46□□□□□ -1.38
RFX4-201ENST00000229387 PPFIA3O75145 1194 aa6.46□□□□□ -1.38
RFX4-201ENST00000229387 HARSP12081 509 aaKnown RBP6.46□□□□□ -1.38
RFX4-201ENST00000229387 EZRP15311 586 aaKnown RBP6.46□□□□□ -1.38
RFX4-201ENST00000229387 CCDC80Q76M96 950 aa6.46□□□□□ -1.38
RFX4-201ENST00000229387 ZGPATQ8N5A5 531 aaKnown RBP6.46□□□□□ -1.38
RFX4-201ENST00000229387 KLHDC4Q8TBB5 520 aa6.46□□□□□ -1.38
RFX4-201ENST00000229387 CACTINQ8WUQ7 758 aaKnown RBP6.46□□□□□ -1.38
RFX4-201ENST00000229387 HOOK2Q96ED9 719 aa6.46□□□□□ -1.38
RFX4-201ENST00000229387 SIL1Q9H173 461 aa6.46□□□□□ -1.38
RFX4-201ENST00000229387 CD248Q9HCU0 757 aa6.46□□□□□ -1.38
RFX4-201ENST00000229387 ANO2Q9NQ90 1003 aa6.46□□□□□ -1.38
RFX4-201ENST00000229387 USP32Q8NFA0 1604 aa6.46□□□□□ -1.38
RFX4-201ENST00000229387 SBNO1A3KN83 1393 aa6.45□□□□□ -1.38
RFX4-201ENST00000229387 TTC41PQ6P2S7 1318 aa6.45□□□□□ -1.38
RFX4-201ENST00000229387 PHLPP2Q6ZVD8 1323 aa6.45□□□□□ -1.38
RFX4-201ENST00000229387 IGSF1Q8N6C5 1336 aa6.45□□□□□ -1.38
RFX4-201ENST00000229387 CCDC151A5D8V7 595 aa6.45□□□□□ -1.38
RFX4-201ENST00000229387 KIF5CO60282 957 aa6.45□□□□□ -1.38
RFX4-201ENST00000229387 GNAI2P04899 355 aa6.45□□□□□ -1.38
RFX4-201ENST00000229387 UBTFL1P0CB47 393 aaPredicted RBP6.45□□□□□ -1.38
RFX4-201ENST00000229387 RANBP1P43487 201 aa6.45□□□□□ -1.38
RFX4-201ENST00000229387 SMTNP53814 917 aa6.45□□□□□ -1.38
RFX4-201ENST00000229387 KCNB1Q14721 858 aa6.45□□□□□ -1.38
RFX4-201ENST00000229387 KCNN1Q92952 543 aa6.45□□□□□ -1.38
RFX4-201ENST00000229387 RBM41Q96IZ5 413 aaKnown RBP6.45□□□□□ -1.38
RFX4-201ENST00000229387 IL25Q9H293 177 aa6.45□□□□□ -1.38
RFX4-201ENST00000229387 WDR37Q9Y2I8 494 aa6.45□□□□□ -1.38
RFX4-201ENST00000229387 RIMS1Q86UR5 1692 aaKnown RBP6.45□□□□□ -1.38
RFX4-201ENST00000229387 CDC42BPGQ6DT37 1551 aa6.45□□□□□ -1.38
RFX4-201ENST00000229387 CRB1P82279 1406 aa6.45□□□□□ -1.38
RFX4-201ENST00000229387 MAP3K5Q99683 1374 aa6.45□□□□□ -1.38
RFX4-201ENST00000229387 RPAP1Q9BWH6 1393 aaPredicted RBP6.45□□□□□ -1.38
RFX4-201ENST00000229387 A0A0G2JS52 829 aa6.45□□□□□ -1.38
RFX4-201ENST00000229387 LRRC10BA6NIK2 292 aa6.45□□□□□ -1.38
RFX4-201ENST00000229387 ANKRD65E5RJM6 399 aa6.45□□□□□ -1.38
RFX4-201ENST00000229387 EBAG9O00559 213 aa6.45□□□□□ -1.38
RFX4-201ENST00000229387 FERP16591 822 aa6.45□□□□□ -1.38
RFX4-201ENST00000229387 ZNF75DP51815 510 aa6.45□□□□□ -1.38
RFX4-201ENST00000229387 FOXD4Q12950 439 aaPredicted RBP6.45□□□□□ -1.38
RFX4-201ENST00000229387 SF3B2Q13435 895 aaKnown RBP6.45□□□□□ -1.38
RFX4-201ENST00000229387 PRPF4BQ13523 1007 aaKnown RBP6.45□□□□□ -1.38
RFX4-201ENST00000229387 SLMAPQ14BN4 828 aa6.45□□□□□ -1.38
RFX4-201ENST00000229387 DPY19L2Q6NUT2 758 aa6.45□□□□□ -1.38
RFX4-201ENST00000229387 APBB1IPQ7Z5R6 666 aaPredicted RBP6.45□□□□□ -1.38
RFX4-201ENST00000229387 YTHDF3Q7Z739 585 aaKnown RBP6.45□□□□□ -1.38
RFX4-201ENST00000229387 APLFQ8IW19 511 aaPredicted RBP6.45□□□□□ -1.38
RFX4-201ENST00000229387 STAG2Q8N3U4 1231 aa6.45□□□□□ -1.38
RFX4-201ENST00000229387 USP44Q9H0E7 712 aa6.45□□□□□ -1.38
RFX4-201ENST00000229387 DDX20Q9UHI6 824 aaKnown RBP6.45□□□□□ -1.38
RFX4-201ENST00000229387 CORO1CQ9ULV4 474 aaPredicted RBP6.45□□□□□ -1.38
RFX4-201ENST00000229387 IQSEC3Q9UPP2 1182 aaPredicted RBP6.45□□□□□ -1.38
RFX4-201ENST00000229387 ATP8A1Q9Y2Q0 1164 aa6.45□□□□□ -1.38
RFX4-201ENST00000229387 TTC21AQ8NDW8 1320 aa6.45□□□□□ -1.38
RFX4-201ENST00000229387 GOLGA6L10A6NI86 522 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 HAX1O00165 279 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 RASSF9O75901 435 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 RPL13P26373 211 aaKnown RBP6.44□□□□□ -1.38
RFX4-201ENST00000229387 PABPC4Q13310 644 aaKnown RBP eCLIP6.44□□□□□ -1.38
RFX4-201ENST00000229387 POSTNQ15063 836 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 MIS18BP1Q6P0N0 1132 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 PPP1R42Q7Z4L9 355 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 ANKRD24Q8TF21 1146 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 DHX38Q92620 1227 aaKnown RBP6.44□□□□□ -1.38
RFX4-201ENST00000229387 DHRS1Q96LJ7 313 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 CCDC114Q96M63 670 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 USP26Q9BXU7 913 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 KLC4Q9NSK0 619 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 PSDA5PKW4 1024 aaPredicted RBP6.44□□□□□ -1.38
RFX4-201ENST00000229387 SLC27A2O14975 620 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 CYP11B2P19099 503 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 YY1P25490 414 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 SLC8A1P32418 973 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 FLT3P36888 993 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms