RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 SEMA3EO15041 775 aa25.32■■□□□ 1.64
SMARCD2-201ENST00000225742 CCZ1BP86790 482 aa25.32■■□□□ 1.64
SMARCD2-201ENST00000225742 CCZ1P86791 482 aaPredicted RBP25.32■■□□□ 1.64
SMARCD2-201ENST00000225742 ZNF654Q8IZM8 581 aa25.32■■□□□ 1.64
SMARCD2-201ENST00000225742 FANCBQ8NB91 859 aa25.32■■□□□ 1.64
SMARCD2-201ENST00000225742 CAVIN4Q5BKX8 364 aa25.31■■□□□ 1.64
SMARCD2-201ENST00000225742 KRBA2Q6ZNG9 492 aa25.31■■□□□ 1.64
SMARCD2-201ENST00000225742 FILIP1Q7Z7B0 1213 aa25.31■■□□□ 1.64
SMARCD2-201ENST00000225742 DIS3L2Q8IYB7 885 aaKnown RBP25.31■■□□□ 1.64
SMARCD2-201ENST00000225742 ZNF579Q8NAF0 562 aaKnown RBP25.31■■□□□ 1.64
SMARCD2-201ENST00000225742 MIGA1Q8NAN2 632 aa25.31■■□□□ 1.64
SMARCD2-201ENST00000225742 FBXW7Q969H0 707 aa25.31■■□□□ 1.64
SMARCD2-201ENST00000225742 BRIP1Q9BX63 1249 aa25.31■■□□□ 1.64
SMARCD2-201ENST00000225742 RAI14Q9P0K7 980 aa25.31■■□□□ 1.64
SMARCD2-201ENST00000225742 KCNH3Q9ULD8 1083 aa25.31■■□□□ 1.64
SMARCD2-201ENST00000225742 SLC10A5Q5PT55 438 aa25.3■■□□□ 1.64
SMARCD2-201ENST00000225742 TMED8Q6PL24 325 aaPredicted RBP25.3■■□□□ 1.64
SMARCD2-201ENST00000225742 CEP131Q9UPN4 1083 aa25.3■■□□□ 1.64
SMARCD2-201ENST00000225742 BIN1O00499 593 aa25.3■■□□□ 1.64
SMARCD2-201ENST00000225742 KCNJ6P48051 423 aa25.3■■□□□ 1.64
SMARCD2-201ENST00000225742 SEC23AQ15436 765 aa25.3■■□□□ 1.64
SMARCD2-201ENST00000225742 PDS5AQ29RF7 1337 aaKnown RBP25.3■■□□□ 1.64
SMARCD2-201ENST00000225742 C16orf45Q96MC5 204 aaPredicted RBP25.3■■□□□ 1.64
SMARCD2-201ENST00000225742 RNF26Q9BY78 433 aaPredicted RBP25.3■■□□□ 1.64
SMARCD2-201ENST00000225742 XPO4Q9C0E2 1151 aaKnown RBP25.3■■□□□ 1.64
SMARCD2-201ENST00000225742 CACNA1SQ13698 1873 aa25.29■■□□□ 1.64
SMARCD2-201ENST00000225742 KIF2AO00139 706 aaPredicted RBP25.29■■□□□ 1.64
SMARCD2-201ENST00000225742 CBFA2T2O43439 604 aa25.29■■□□□ 1.64
SMARCD2-201ENST00000225742 ADAMTS2O95450 1211 aa25.29■■□□□ 1.64
SMARCD2-201ENST00000225742 OLFM4Q6UX06 510 aa25.29■■□□□ 1.64
SMARCD2-201ENST00000225742 RIOK1Q9BRS2 568 aaKnown RBP25.29■■□□□ 1.64
SMARCD2-201ENST00000225742 IFNKQ9P0W0 207 aa25.29■■□□□ 1.64
SMARCD2-201ENST00000225742 SCN7AQ01118 1682 aa25.29■■□□□ 1.64
SMARCD2-201ENST00000225742 BTBD18B2RXH4 712 aa25.28■■□□□ 1.64
SMARCD2-201ENST00000225742 NRDCO43847 1150 aa25.28■■□□□ 1.64
SMARCD2-201ENST00000225742 SMC2O95347 1197 aa25.28■■□□□ 1.64
SMARCD2-201ENST00000225742 PTPREP23469 700 aa25.28■■□□□ 1.64
SMARCD2-201ENST00000225742 ERFEQ4G0M1 354 aa25.28■■□□□ 1.64
SMARCD2-201ENST00000225742 BCL2L12Q9HB09 334 aa25.28■■□□□ 1.64
SMARCD2-201ENST00000225742 CASZ1Q86V15 1759 aa25.28■■□□□ 1.64
SMARCD2-201ENST00000225742 FGRP09769 529 aa25.28■■□□□ 1.64
SMARCD2-201ENST00000225742 XBP1P17861 261 aa25.28■■□□□ 1.64
SMARCD2-201ENST00000225742 GUCY1A2P33402 732 aa25.28■■□□□ 1.64
SMARCD2-201ENST00000225742 ZNF710Q8N1W2 664 aa25.28■■□□□ 1.64
SMARCD2-201ENST00000225742 CNNM3Q8NE01 707 aa25.28■■□□□ 1.64
SMARCD2-201ENST00000225742 ZKSCAN3Q9BRR0 538 aa25.28■■□□□ 1.64
SMARCD2-201ENST00000225742 ZBTB22O15209 634 aa25.27■■□□□ 1.64
SMARCD2-201ENST00000225742 TOB1P50616 345 aaPredicted RBP25.27■■□□□ 1.64
SMARCD2-201ENST00000225742 MYL5Q02045 173 aa25.27■■□□□ 1.64
SMARCD2-201ENST00000225742 ARID5BQ14865 1188 aa25.27■■□□□ 1.64
SMARCD2-201ENST00000225742 CEP135Q66GS9 1140 aa25.27■■□□□ 1.64
SMARCD2-201ENST00000225742 NYAP1Q6ZVC0 841 aa25.27■■□□□ 1.64
SMARCD2-201ENST00000225742 STK11IPQ8N1F8 1099 aa25.27■■□□□ 1.64
SMARCD2-201ENST00000225742 CLIC6Q96NY7 704 aa25.27■■□□□ 1.64
SMARCD2-201ENST00000225742 ABCF2Q9UG63 623 aa25.27■■□□□ 1.64
SMARCD2-201ENST00000225742 DLEC1Q9Y238 1755 aa25.27■■□□□ 1.64
SMARCD2-201ENST00000225742 CNTNAP4Q9C0A0 1308 aa25.26■■□□□ 1.63
SMARCD2-201ENST00000225742 DUOX1Q9NRD9 1551 aa25.26■■□□□ 1.63
SMARCD2-201ENST00000225742 CALM1P0DP23 149 aa25.26■■□□□ 1.63
SMARCD2-201ENST00000225742 CALM2P0DP24 149 aa25.26■■□□□ 1.63
SMARCD2-201ENST00000225742 CALM3P0DP25 149 aa25.26■■□□□ 1.63
SMARCD2-201ENST00000225742 GYG1P46976 350 aa25.26■■□□□ 1.63
SMARCD2-201ENST00000225742 FANCCQ00597 558 aa25.26■■□□□ 1.63
SMARCD2-201ENST00000225742 ADGRA1Q86SQ6 560 aa25.26■■□□□ 1.63
SMARCD2-201ENST00000225742 METTL16Q86W50 562 aaKnown RBP25.26■■□□□ 1.63
SMARCD2-201ENST00000225742 RBM28Q9NW13 759 aaKnown RBP25.26■■□□□ 1.63
SMARCD2-201ENST00000225742 FBXO2Q9UK22 296 aaPredicted RBP25.26■■□□□ 1.63
SMARCD2-201ENST00000225742 MYH6P13533 1939 aa25.26■■□□□ 1.63
SMARCD2-201ENST00000225742 TNKSO95271 1327 aa25.26■■□□□ 1.63
SMARCD2-201ENST00000225742 MINDY4BA8MYZ0 360 aa25.26■■□□□ 1.63
SMARCD2-201ENST00000225742 AKAP17AQ02040 695 aaKnown RBP25.26■■□□□ 1.63
SMARCD2-201ENST00000225742 LONRF3Q496Y0 759 aa25.26■■□□□ 1.63
SMARCD2-201ENST00000225742 KANK3Q6NY19 840 aa25.26■■□□□ 1.63
SMARCD2-201ENST00000225742 CCAR2Q8N163 923 aaKnown RBP25.26■■□□□ 1.63
SMARCD2-201ENST00000225742 MINPP1Q9UNW1 487 aa25.26■■□□□ 1.63
SMARCD2-201ENST00000225742 COL4A1P02462 1669 aa25.25■■□□□ 1.63
SMARCD2-201ENST00000225742 COL1A1P02452 1464 aaPredicted RBP25.25■■□□□ 1.63
SMARCD2-201ENST00000225742 PNOCQ13519 176 aa25.25■■□□□ 1.63
SMARCD2-201ENST00000225742 PTPN14Q15678 1187 aa25.25■■□□□ 1.63
SMARCD2-201ENST00000225742 TMC6Q7Z403 805 aa25.25■■□□□ 1.63
SMARCD2-201ENST00000225742 NUP133Q8WUM0 1156 aa25.25■■□□□ 1.63
SMARCD2-201ENST00000225742 ANKRD7Q92527 254 aa25.25■■□□□ 1.63
SMARCD2-201ENST00000225742 ZSCAN10Q96SZ4 725 aaPredicted RBP25.25■■□□□ 1.63
SMARCD2-201ENST00000225742 KCNJ14Q9UNX9 436 aa25.25■■□□□ 1.63
SMARCD2-201ENST00000225742 PRPF3O43395 683 aaKnown RBP25.24■■□□□ 1.63
SMARCD2-201ENST00000225742 TUBB4AP04350 444 aa25.24■■□□□ 1.63
SMARCD2-201ENST00000225742 FBXO33Q7Z6M2 555 aa25.24■■□□□ 1.63
SMARCD2-201ENST00000225742 CCDC112Q8NEF3 446 aa25.24■■□□□ 1.63
SMARCD2-201ENST00000225742 SDR42E1Q8WUS8 393 aa25.24■■□□□ 1.63
SMARCD2-201ENST00000225742 NYXQ9GZU5 481 aa25.24■■□□□ 1.63
SMARCD2-201ENST00000225742 SRPRBQ9Y5M8 271 aaKnown RBP25.24■■□□□ 1.63
SMARCD2-201ENST00000225742 UBE2Q2LH0YL09 131 aa25.23■■□□□ 1.63
SMARCD2-201ENST00000225742 MDM2Q00987 491 aaPredicted RBP25.23■■□□□ 1.63
SMARCD2-201ENST00000225742 CATIPQ7Z7H3 387 aa25.23■■□□□ 1.63
SMARCD2-201ENST00000225742 FAM84BQ96KN1 310 aaPredicted RBP25.23■■□□□ 1.63
SMARCD2-201ENST00000225742 DACH1Q9UI36 760 aa25.23■■□□□ 1.63
SMARCD2-201ENST00000225742 IGSF3O75054 1194 aa25.23■■□□□ 1.63
SMARCD2-201ENST00000225742 SFPQP23246 707 aaKnown RBP eCLIP25.23■■□□□ 1.63
SMARCD2-201ENST00000225742 NT5DC1Q5TFE4 455 aa25.23■■□□□ 1.63
SMARCD2-201ENST00000225742 TRIML1Q8N9V2 468 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms