RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 ANKRD13AQ8IZ07 590 aa17.31■□□□□ 0.36
SUPT4H1-201ENST00000225504 ELP3Q9H9T3 547 aa17.31■□□□□ 0.36
SUPT4H1-201ENST00000225504 MCM9Q9NXL9 1143 aa17.31■□□□□ 0.36
SUPT4H1-201ENST00000225504 SIPA1L1O43166 1804 aa17.31■□□□□ 0.36
SUPT4H1-201ENST00000225504 COL2A1P02458 1487 aaPredicted RBP17.31■□□□□ 0.36
SUPT4H1-201ENST00000225504 CYP2D7A0A087X1C5 515 aa17.31■□□□□ 0.36
SUPT4H1-201ENST00000225504 TBC1D12O60347 775 aa17.31■□□□□ 0.36
SUPT4H1-201ENST00000225504 SLC10A3P09131 477 aa17.31■□□□□ 0.36
SUPT4H1-201ENST00000225504 FOXP4Q8IVH2 680 aaPredicted RBP17.31■□□□□ 0.36
SUPT4H1-201ENST00000225504 CCDC102AQ96A19 550 aa17.31■□□□□ 0.36
SUPT4H1-201ENST00000225504 DNAJC18Q9H819 358 aa17.31■□□□□ 0.36
SUPT4H1-201ENST00000225504 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.31■□□□□ 0.36
SUPT4H1-201ENST00000225504 ATP8A2Q9NTI2 1148 aa17.31■□□□□ 0.36
SUPT4H1-201ENST00000225504 OTOFQ9HC10 1997 aa17.3■□□□□ 0.36
SUPT4H1-201ENST00000225504 POLR3DP05423 398 aaPredicted RBP17.3■□□□□ 0.36
SUPT4H1-201ENST00000225504 GJA5P36382 358 aa17.3■□□□□ 0.36
SUPT4H1-201ENST00000225504 ECE1P42892 770 aa17.3■□□□□ 0.36
SUPT4H1-201ENST00000225504 METTL16Q86W50 562 aaKnown RBP17.3■□□□□ 0.36
SUPT4H1-201ENST00000225504 HELLSQ9NRZ9 838 aa17.3■□□□□ 0.36
SUPT4H1-201ENST00000225504 SNCAIPQ9Y6H5 919 aa17.3■□□□□ 0.36
SUPT4H1-201ENST00000225504 BAZ2AQ9UIF9 1905 aaKnown RBP17.29■□□□□ 0.36
SUPT4H1-201ENST00000225504 USP17L12C9JPN9 530 aa17.29■□□□□ 0.36
SUPT4H1-201ENST00000225504 USP17L21D6R901 530 aa17.29■□□□□ 0.36
SUPT4H1-201ENST00000225504 FOXP2O15409 715 aa17.29■□□□□ 0.36
SUPT4H1-201ENST00000225504 JAG1P78504 1218 aa17.29■□□□□ 0.36
SUPT4H1-201ENST00000225504 KIF23Q02241 960 aaPredicted RBP17.29■□□□□ 0.36
SUPT4H1-201ENST00000225504 CTR9Q6PD62 1173 aa17.29■□□□□ 0.36
SUPT4H1-201ENST00000225504 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.29■□□□□ 0.36
SUPT4H1-201ENST00000225504 UNCXA6NJT0 531 aa17.28■□□□□ 0.36
SUPT4H1-201ENST00000225504 PATL2C9JE40 543 aaKnown RBP17.28■□□□□ 0.36
SUPT4H1-201ENST00000225504 SHROOM1Q2M3G4 852 aaPredicted RBP17.28■□□□□ 0.36
SUPT4H1-201ENST00000225504 MCMDC2Q4G0Z9 681 aa17.28■□□□□ 0.36
SUPT4H1-201ENST00000225504 VPS53Q5VIR6 699 aa17.28■□□□□ 0.36
SUPT4H1-201ENST00000225504 SPRYD7Q5W111 196 aa17.28■□□□□ 0.36
SUPT4H1-201ENST00000225504 CWC27Q6UX04 472 aaKnown RBP17.28■□□□□ 0.36
SUPT4H1-201ENST00000225504 TTC6Q86TZ1 520 aa17.28■□□□□ 0.36
SUPT4H1-201ENST00000225504 ZNF589Q86UQ0 364 aaPredicted RBP17.28■□□□□ 0.36
SUPT4H1-201ENST00000225504 TICAM2Q86XR7 235 aa17.28■□□□□ 0.36
SUPT4H1-201ENST00000225504 JMYQ8N9B5 988 aa17.28■□□□□ 0.36
SUPT4H1-201ENST00000225504 WNK4Q96J92 1243 aa17.28■□□□□ 0.36
SUPT4H1-201ENST00000225504 EPB41L4AQ9HCS5 686 aaPredicted RBP17.28■□□□□ 0.36
SUPT4H1-201ENST00000225504 CSADQ9Y600 493 aa17.28■□□□□ 0.36
SUPT4H1-201ENST00000225504 APPP05067 770 aa17.27■□□□□ 0.36
SUPT4H1-201ENST00000225504 HLA-DOAP06340 250 aa17.27■□□□□ 0.36
SUPT4H1-201ENST00000225504 C12orf60Q5U649 245 aa17.27■□□□□ 0.36
SUPT4H1-201ENST00000225504 CRACR2BQ8N4Y2 399 aaPredicted RBP17.27■□□□□ 0.36
SUPT4H1-201ENST00000225504 OPTNQ96CV9 577 aa17.27■□□□□ 0.36
SUPT4H1-201ENST00000225504 DYNLL2Q96FJ2 89 aa17.27■□□□□ 0.36
SUPT4H1-201ENST00000225504 IL25Q9H293 177 aa17.27■□□□□ 0.36
SUPT4H1-201ENST00000225504 HERC5Q9UII4 1024 aaKnown RBP17.27■□□□□ 0.36
SUPT4H1-201ENST00000225504 NAV1Q8NEY1 1877 aa17.27■□□□□ 0.36
SUPT4H1-201ENST00000225504 DDX60LQ5H9U9 1706 aaKnown RBP17.26■□□□□ 0.35
SUPT4H1-201ENST00000225504 MAP2K2P36507 400 aa17.26■□□□□ 0.35
SUPT4H1-201ENST00000225504 NOGQ13253 232 aa17.26■□□□□ 0.35
SUPT4H1-201ENST00000225504 CCDC84Q86UT8 332 aaPredicted RBP17.26■□□□□ 0.35
SUPT4H1-201ENST00000225504 IFNL3Q8IZI9 196 aa17.26■□□□□ 0.35
SUPT4H1-201ENST00000225504 SERPINB13Q9UIV8 391 aa17.26■□□□□ 0.35
SUPT4H1-201ENST00000225504 CTNND1O60716 968 aaKnown RBP17.25■□□□□ 0.35
SUPT4H1-201ENST00000225504 GNAT2P19087 354 aa17.25■□□□□ 0.35
SUPT4H1-201ENST00000225504 CHMLP26374 656 aa17.25■□□□□ 0.35
SUPT4H1-201ENST00000225504 GABPAQ06546 454 aa17.25■□□□□ 0.35
SUPT4H1-201ENST00000225504 NOL9Q5SY16 702 aaKnown RBP17.25■□□□□ 0.35
SUPT4H1-201ENST00000225504 SLC44A5Q8NCS7 719 aa17.25■□□□□ 0.35
SUPT4H1-201ENST00000225504 OTUD5Q96G74 571 aa17.25■□□□□ 0.35
SUPT4H1-201ENST00000225504 EHD4Q9H223 541 aa17.25■□□□□ 0.35
SUPT4H1-201ENST00000225504 DIAPH3Q9NSV4 1193 aa17.25■□□□□ 0.35
SUPT4H1-201ENST00000225504 SPDYE5A6NIY4 337 aa17.24■□□□□ 0.35
SUPT4H1-201ENST00000225504 SHMT1P34896 483 aa17.24■□□□□ 0.35
SUPT4H1-201ENST00000225504 CAP2P40123 477 aa17.24■□□□□ 0.35
SUPT4H1-201ENST00000225504 TATDN1Q6P1N9 297 aa17.24■□□□□ 0.35
SUPT4H1-201ENST00000225504 GIMAP6Q6P9H5 292 aa17.24■□□□□ 0.35
SUPT4H1-201ENST00000225504 SCYL3Q8IZE3 742 aa17.24■□□□□ 0.35
SUPT4H1-201ENST00000225504 STK11IPQ8N1F8 1099 aa17.24■□□□□ 0.35
SUPT4H1-201ENST00000225504 MINDY4BA8MYZ0 360 aa17.24■□□□□ 0.35
SUPT4H1-201ENST00000225504 GDF11O95390 407 aa17.24■□□□□ 0.35
SUPT4H1-201ENST00000225504 PTPRAP18433 802 aa17.24■□□□□ 0.35
SUPT4H1-201ENST00000225504 SBK1Q52WX2 424 aa17.24■□□□□ 0.35
SUPT4H1-201ENST00000225504 ERO1BQ86YB8 467 aa17.24■□□□□ 0.35
SUPT4H1-201ENST00000225504 PIAS4Q8N2W9 510 aaPredicted RBP17.24■□□□□ 0.35
SUPT4H1-201ENST00000225504 DDRGK1Q96HY6 314 aa17.24■□□□□ 0.35
SUPT4H1-201ENST00000225504 TRIM34Q9BYJ4 488 aa17.24■□□□□ 0.35
SUPT4H1-201ENST00000225504 PCNTO95613 3336 aa17.23■□□□□ 0.35
SUPT4H1-201ENST00000225504 HIP1O00291 1037 aa17.23■□□□□ 0.35
SUPT4H1-201ENST00000225504 IRF6O14896 467 aa17.23■□□□□ 0.35
SUPT4H1-201ENST00000225504 HSPD1P10809 573 aaKnown RBP17.23■□□□□ 0.35
SUPT4H1-201ENST00000225504 TDO2P48775 406 aa17.23■□□□□ 0.35
SUPT4H1-201ENST00000225504 MS4A4AQ96JQ5 239 aa17.23■□□□□ 0.35
SUPT4H1-201ENST00000225504 CCDC171Q6TFL3 1326 aa17.23■□□□□ 0.35
SUPT4H1-201ENST00000225504 ZBTB48P10074 688 aaPredicted RBP17.22■□□□□ 0.35
SUPT4H1-201ENST00000225504 BMP2KLQ5H9B9 411 aa17.22■□□□□ 0.35
SUPT4H1-201ENST00000225504 PICK1Q9NRD5 415 aa17.22■□□□□ 0.35
SUPT4H1-201ENST00000225504 ZHX2Q9Y6X8 837 aa17.22■□□□□ 0.35
SUPT4H1-201ENST00000225504 FGAP02671 866 aa17.21■□□□□ 0.35
SUPT4H1-201ENST00000225504 CDK8P49336 464 aa17.21■□□□□ 0.35
SUPT4H1-201ENST00000225504 PPATQ06203 517 aa17.21■□□□□ 0.35
SUPT4H1-201ENST00000225504 NACAP1Q9BZK3 213 aa17.21■□□□□ 0.35
SUPT4H1-201ENST00000225504 INCENPQ9NQS7 918 aa17.21■□□□□ 0.35
SUPT4H1-201ENST00000225504 WBP1LQ9NX94 342 aa17.21■□□□□ 0.35
SUPT4H1-201ENST00000225504 ARPP21Q9UBL0 812 aaPredicted RBP17.21■□□□□ 0.35
SUPT4H1-201ENST00000225504 THSD7BQ9C0I4 1608 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms