RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 FOXP2O15409 715 aa28.27■■■□□ 2.12
HOMER3-201ENST00000221222 IL25Q9H293 177 aa28.27■■■□□ 2.12
HOMER3-201ENST00000221222 PPP1R12BO60237 982 aaPredicted RBP28.26■■■□□ 2.12
HOMER3-201ENST00000221222 CDC45O75419 566 aa28.26■■■□□ 2.12
HOMER3-201ENST00000221222 MAP2K2P36507 400 aa28.26■■■□□ 2.12
HOMER3-201ENST00000221222 DCAF15Q66K64 600 aa28.26■■■□□ 2.12
HOMER3-201ENST00000221222 TTC6Q86TZ1 520 aa28.26■■■□□ 2.12
HOMER3-201ENST00000221222 METTL16Q86W50 562 aaKnown RBP28.26■■■□□ 2.12
HOMER3-201ENST00000221222 IFNL3Q8IZI9 196 aa28.26■■■□□ 2.12
HOMER3-201ENST00000221222 C2orf69Q8N8R5 385 aa28.26■■■□□ 2.12
HOMER3-201ENST00000221222 LAMB1P07942 1786 aa28.25■■■□□ 2.11
HOMER3-201ENST00000221222 TBC1D12O60347 775 aa28.25■■■□□ 2.11
HOMER3-201ENST00000221222 HLA-DOAP06340 250 aa28.25■■■□□ 2.11
HOMER3-201ENST00000221222 MAP3K11Q16584 847 aa28.25■■■□□ 2.11
HOMER3-201ENST00000221222 VPS53Q5VIR6 699 aa28.25■■■□□ 2.11
HOMER3-201ENST00000221222 HHIPL1Q96JK4 782 aa28.25■■■□□ 2.11
HOMER3-201ENST00000221222 NACAP1Q9BZK3 213 aa28.25■■■□□ 2.11
HOMER3-201ENST00000221222 SGSM2O43147 1006 aa28.24■■■□□ 2.11
HOMER3-201ENST00000221222 USP2O75604 605 aaPredicted RBP28.24■■■□□ 2.11
HOMER3-201ENST00000221222 APPP05067 770 aa28.24■■■□□ 2.11
HOMER3-201ENST00000221222 HSPD1P10809 573 aaKnown RBP28.24■■■□□ 2.11
HOMER3-201ENST00000221222 FOXP4Q8IVH2 680 aaPredicted RBP28.24■■■□□ 2.11
HOMER3-201ENST00000221222 EHD4Q9H223 541 aa28.24■■■□□ 2.11
HOMER3-201ENST00000221222 ARPP21Q9UBL0 812 aaPredicted RBP28.24■■■□□ 2.11
HOMER3-201ENST00000221222 OTOFQ9HC10 1997 aa28.24■■■□□ 2.11
HOMER3-201ENST00000221222 USP17L12C9JPN9 530 aa28.24■■■□□ 2.11
HOMER3-201ENST00000221222 USP17L21D6R901 530 aa28.24■■■□□ 2.11
HOMER3-201ENST00000221222 POLR3DP05423 398 aaPredicted RBP28.24■■■□□ 2.11
HOMER3-201ENST00000221222 ALX1Q15699 326 aa28.24■■■□□ 2.11
HOMER3-201ENST00000221222 SBK1Q52WX2 424 aa28.24■■■□□ 2.11
HOMER3-201ENST00000221222 CTR9Q6PD62 1173 aa28.24■■■□□ 2.11
HOMER3-201ENST00000221222 MIGA2Q7L4E1 593 aa28.24■■■□□ 2.11
HOMER3-201ENST00000221222 ARMC9Q7Z3E5 817 aa28.24■■■□□ 2.11
HOMER3-201ENST00000221222 ZIC5Q96T25 663 aa28.24■■■□□ 2.11
HOMER3-201ENST00000221222 HERC5Q9UII4 1024 aaKnown RBP28.24■■■□□ 2.11
HOMER3-201ENST00000221222 TDO2P48775 406 aa28.23■■■□□ 2.11
HOMER3-201ENST00000221222 PLCD1P51178 756 aa28.23■■■□□ 2.11
HOMER3-201ENST00000221222 PRKG1Q13976 671 aa28.23■■■□□ 2.11
HOMER3-201ENST00000221222 C12orf60Q5U649 245 aa28.23■■■□□ 2.11
HOMER3-201ENST00000221222 AMOTL1Q8IY63 956 aa28.23■■■□□ 2.11
HOMER3-201ENST00000221222 ZNF341Q9BYN7 854 aa28.23■■■□□ 2.11
HOMER3-201ENST00000221222 ANGEL1Q9UNK9 670 aaKnown RBP28.23■■■□□ 2.11
HOMER3-201ENST00000221222 FZD1Q9UP38 647 aa28.23■■■□□ 2.11
HOMER3-201ENST00000221222 ZMYM6O95789 1325 aa28.22■■■□□ 2.11
HOMER3-201ENST00000221222 TTLL12Q14166 644 aaPredicted RBP28.22■■■□□ 2.11
HOMER3-201ENST00000221222 CASC1Q6TDU7 716 aa28.22■■■□□ 2.11
HOMER3-201ENST00000221222 MOB2Q70IA6 237 aa28.22■■■□□ 2.11
HOMER3-201ENST00000221222 ESYT1Q9BSJ8 1104 aa28.22■■■□□ 2.11
HOMER3-201ENST00000221222 NAPBQ9H115 298 aa28.22■■■□□ 2.11
HOMER3-201ENST00000221222 TAOK2Q9UL54 1235 aa28.22■■■□□ 2.11
HOMER3-201ENST00000221222 UNCXA6NJT0 531 aa28.21■■■□□ 2.11
HOMER3-201ENST00000221222 CYP2D6P10635 497 aa28.21■■■□□ 2.11
HOMER3-201ENST00000221222 IREB2P48200 963 aaKnown RBP28.21■■■□□ 2.11
HOMER3-201ENST00000221222 SLC4A8Q2Y0W8 1093 aa28.21■■■□□ 2.11
HOMER3-201ENST00000221222 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.21■■■□□ 2.11
HOMER3-201ENST00000221222 DSCC1Q9BVC3 393 aa28.21■■■□□ 2.11
HOMER3-201ENST00000221222 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.21■■■□□ 2.11
HOMER3-201ENST00000221222 SERPINB13Q9UIV8 391 aa28.21■■■□□ 2.11
HOMER3-201ENST00000221222 ZNF112Q9UJU3 913 aa28.21■■■□□ 2.11
HOMER3-201ENST00000221222 SLURP2P0DP57 97 aa28.2■■■□□ 2.1
HOMER3-201ENST00000221222 GABPAQ06546 454 aa28.2■■■□□ 2.1
HOMER3-201ENST00000221222 LDLRAD1Q5T700 205 aa28.2■■■□□ 2.1
HOMER3-201ENST00000221222 DNAJC18Q9H819 358 aa28.2■■■□□ 2.1
HOMER3-201ENST00000221222 PHF20L1A8MW92 1017 aa28.19■■■□□ 2.1
HOMER3-201ENST00000221222 EVX2Q03828 476 aa28.19■■■□□ 2.1
HOMER3-201ENST00000221222 RGMBQ6NW40 437 aa28.19■■■□□ 2.1
HOMER3-201ENST00000221222 CRACR2BQ8N4Y2 399 aaPredicted RBP28.19■■■□□ 2.1
HOMER3-201ENST00000221222 CYP2D7A0A087X1C5 515 aa28.18■■■□□ 2.1
HOMER3-201ENST00000221222 UBE2Q2LH0YL09 131 aa28.18■■■□□ 2.1
HOMER3-201ENST00000221222 FGAP02671 866 aa28.18■■■□□ 2.1
HOMER3-201ENST00000221222 ROBO3Q96MS0 1386 aa28.18■■■□□ 2.1
HOMER3-201ENST00000221222 MYH8P13535 1937 aa28.17■■■□□ 2.1
HOMER3-201ENST00000221222 FAM196BA6NMK8 535 aa28.17■■■□□ 2.1
HOMER3-201ENST00000221222 NOGQ13253 232 aa28.17■■■□□ 2.1
HOMER3-201ENST00000221222 ANKRD13AQ8IZ07 590 aa28.17■■■□□ 2.1
HOMER3-201ENST00000221222 WRNIP1Q96S55 665 aa28.17■■■□□ 2.1
HOMER3-201ENST00000221222 TRIM34Q9BYJ4 488 aa28.17■■■□□ 2.1
HOMER3-201ENST00000221222 LAMA4Q16363 1823 aa28.17■■■□□ 2.1
HOMER3-201ENST00000221222 MAP3K9P80192 1104 aa28.16■■■□□ 2.1
HOMER3-201ENST00000221222 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.16■■■□□ 2.1
HOMER3-201ENST00000221222 CASP8AP2Q9UKL3 1982 aa28.16■■■□□ 2.1
HOMER3-201ENST00000221222 MINDY4BA8MYZ0 360 aa28.15■■■□□ 2.1
HOMER3-201ENST00000221222 SMIM22K7EJ46 135 aa28.15■■■□□ 2.1
HOMER3-201ENST00000221222 ZNF157P51786 506 aaPredicted RBP28.15■■■□□ 2.1
HOMER3-201ENST00000221222 TATDN1Q6P1N9 297 aa28.15■■■□□ 2.1
HOMER3-201ENST00000221222 SWAP70Q9UH65 585 aa28.15■■■□□ 2.1
HOMER3-201ENST00000221222 DOCK1Q14185 1865 aa28.15■■■□□ 2.1
HOMER3-201ENST00000221222 FAM155AB1AL88 458 aaPredicted RBP28.14■■■□□ 2.1
HOMER3-201ENST00000221222 C16orf86Q6ZW13 317 aa28.14■■■□□ 2.1
HOMER3-201ENST00000221222 ANAPC4Q9UJX5 808 aa28.14■■■□□ 2.1
HOMER3-201ENST00000221222 ATAD5Q96QE3 1844 aa28.14■■■□□ 2.1
HOMER3-201ENST00000221222 CTNND1O60716 968 aaKnown RBP28.13■■■□□ 2.09
HOMER3-201ENST00000221222 INPP5BP32019 993 aa28.13■■■□□ 2.09
HOMER3-201ENST00000221222 PTH1RQ03431 593 aa28.13■■■□□ 2.09
HOMER3-201ENST00000221222 PPARAQ07869 468 aa28.13■■■□□ 2.09
HOMER3-201ENST00000221222 NOL9Q5SY16 702 aaKnown RBP28.13■■■□□ 2.09
HOMER3-201ENST00000221222 DYNLL2Q96FJ2 89 aa28.13■■■□□ 2.09
HOMER3-201ENST00000221222 SHMT1P34896 483 aa28.12■■■□□ 2.09
HOMER3-201ENST00000221222 VGLL4Q14135 290 aa28.12■■■□□ 2.09
HOMER3-201ENST00000221222 KIAA1211Q6ZU35 1233 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms