RNA–Protein interactions for RNA: ENST00000217957.9

VSIG1-201, Transcript of V-set and immunoglobulin domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSIG1, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG1-201ENST00000217957 OCEL1Q9H607 264 aa10.32□□□□□ -0.76
VSIG1-201ENST00000217957 SAP30BPQ9UHR5 308 aaKnown RBP10.32□□□□□ -0.76
VSIG1-201ENST00000217957 RRBP1Q9P2E9 1410 aaKnown RBP10.32□□□□□ -0.76
VSIG1-201ENST00000217957 ATP10BO94823 1461 aa10.32□□□□□ -0.76
VSIG1-201ENST00000217957 FAM86C2PA6NEL3 165 aa10.32□□□□□ -0.76
VSIG1-201ENST00000217957 EYA4O95677 639 aa10.32□□□□□ -0.76
VSIG1-201ENST00000217957 RGL3Q3MIN7 710 aa10.32□□□□□ -0.76
VSIG1-201ENST00000217957 RNF20Q5VTR2 975 aa10.32□□□□□ -0.76
VSIG1-201ENST00000217957 FLCNQ8NFG4 579 aa10.32□□□□□ -0.76
VSIG1-201ENST00000217957 COL26A1Q96A83 441 aa10.32□□□□□ -0.76
VSIG1-201ENST00000217957 BCO2Q9BYV7 579 aa10.32□□□□□ -0.76
VSIG1-201ENST00000217957 SLC5A4Q9NY91 659 aa10.32□□□□□ -0.76
VSIG1-201ENST00000217957 FAM8A1Q9UBU6 413 aa10.32□□□□□ -0.76
VSIG1-201ENST00000217957 ATP10AO60312 1499 aa10.31□□□□□ -0.76
VSIG1-201ENST00000217957 DHX57Q6P158 1386 aaKnown RBP10.31□□□□□ -0.76
VSIG1-201ENST00000217957 GALR2O43603 387 aaPredicted RBP10.31□□□□□ -0.76
VSIG1-201ENST00000217957 TMEM127O75204 238 aa10.31□□□□□ -0.76
VSIG1-201ENST00000217957 TRIM27P14373 513 aa10.31□□□□□ -0.76
VSIG1-201ENST00000217957 MCM4P33991 863 aa10.31□□□□□ -0.76
VSIG1-201ENST00000217957 SCNN1DP51172 638 aa10.31□□□□□ -0.76
VSIG1-201ENST00000217957 NEXNQ0ZGT2 675 aa10.31□□□□□ -0.76
VSIG1-201ENST00000217957 CNGB1Q14028 1251 aaPredicted RBP10.31□□□□□ -0.76
VSIG1-201ENST00000217957 SEPT2Q15019 361 aa10.31□□□□□ -0.76
VSIG1-201ENST00000217957 PUM3Q15397 648 aaKnown RBP10.31□□□□□ -0.76
VSIG1-201ENST00000217957 JAKMIP3Q5VZ66 844 aa10.31□□□□□ -0.76
VSIG1-201ENST00000217957 NUB1Q9Y5A7 615 aa10.31□□□□□ -0.76
VSIG1-201ENST00000217957 PARP3Q9Y6F1 533 aa10.31□□□□□ -0.76
VSIG1-201ENST00000217957 SDSP20132 328 aa10.31□□□□□ -0.76
VSIG1-201ENST00000217957 DGKZQ13574 1117 aa10.31□□□□□ -0.76
VSIG1-201ENST00000217957 LRRC69Q6ZNQ3 347 aa10.31□□□□□ -0.76
VSIG1-201ENST00000217957 TTC30AQ86WT1 665 aa10.31□□□□□ -0.76
VSIG1-201ENST00000217957 CNTD1Q8N815 330 aa10.31□□□□□ -0.76
VSIG1-201ENST00000217957 APOL5Q9BWW9 433 aa10.31□□□□□ -0.76
VSIG1-201ENST00000217957 RAB6BQ9NRW1 208 aa10.31□□□□□ -0.76
VSIG1-201ENST00000217957 SAMD9Q5K651 1589 aa10.3□□□□□ -0.76
VSIG1-201ENST00000217957 A0A1W2PRQ8 180 aa10.3□□□□□ -0.76
VSIG1-201ENST00000217957 TTC36A6NLP5 189 aa10.3□□□□□ -0.76
VSIG1-201ENST00000217957 LRRTM3Q86VH5 581 aa10.3□□□□□ -0.76
VSIG1-201ENST00000217957 RASSF3Q86WH2 238 aa10.3□□□□□ -0.76
VSIG1-201ENST00000217957 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.3□□□□□ -0.76
VSIG1-201ENST00000217957 SOX5P35711 763 aa10.3□□□□□ -0.76
VSIG1-201ENST00000217957 MAP3K10Q02779 954 aa10.3□□□□□ -0.76
VSIG1-201ENST00000217957 ZCCHC8Q6NZY4 707 aaKnown RBP10.3□□□□□ -0.76
VSIG1-201ENST00000217957 RSRC2Q7L4I2 434 aaKnown RBP10.3□□□□□ -0.76
VSIG1-201ENST00000217957 PRDM9Q9NQV7 894 aa10.3□□□□□ -0.76
VSIG1-201ENST00000217957 AAASQ9NRG9 546 aa10.3□□□□□ -0.76
VSIG1-201ENST00000217957 LRRC4BQ9NT99 713 aa10.3□□□□□ -0.76
VSIG1-201ENST00000217957 RRN3Q9NYV6 651 aa10.3□□□□□ -0.76
VSIG1-201ENST00000217957 TRIM6-TRIM34B2RNG4 842 aa10.29□□□□□ -0.76
VSIG1-201ENST00000217957 MAP3K6O95382 1288 aa10.29□□□□□ -0.76
VSIG1-201ENST00000217957 IARSP41252 1262 aaKnown RBP10.29□□□□□ -0.76
VSIG1-201ENST00000217957 EPHA4P54764 986 aa10.29□□□□□ -0.76
VSIG1-201ENST00000217957 DESI1Q6ICB0 168 aa10.29□□□□□ -0.76
VSIG1-201ENST00000217957 CCDC34Q96HJ3 373 aa10.29□□□□□ -0.76
VSIG1-201ENST00000217957 YTHDC1Q96MU7 727 aaKnown RBP10.29□□□□□ -0.76
VSIG1-201ENST00000217957 C2orf49Q9BVC5 232 aaPredicted RBP10.29□□□□□ -0.76
VSIG1-201ENST00000217957 GTF2IRD1Q9UHL9 959 aa10.29□□□□□ -0.76
VSIG1-201ENST00000217957 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.29□□□□□ -0.76
VSIG1-201ENST00000217957 CPNE3O75131 537 aaKnown RBP10.29□□□□□ -0.76
VSIG1-201ENST00000217957 FXR2P51116 673 aaKnown RBP eCLIP10.29□□□□□ -0.76
VSIG1-201ENST00000217957 ZNF460Q14592 562 aa10.29□□□□□ -0.76
VSIG1-201ENST00000217957 AGAP9Q5VTM2 703 aa10.29□□□□□ -0.76
VSIG1-201ENST00000217957 MMS22LQ6ZRQ5 1243 aa10.29□□□□□ -0.76
VSIG1-201ENST00000217957 SH3RF1Q7Z6J0 888 aa10.29□□□□□ -0.76
VSIG1-201ENST00000217957 STRBPQ96SI9 672 aaKnown RBP10.29□□□□□ -0.76
VSIG1-201ENST00000217957 ZNF700Q9H0M5 742 aa10.29□□□□□ -0.76
VSIG1-201ENST00000217957 PMLP29590 882 aa10.29□□□□□ -0.76
VSIG1-201ENST00000217957 PPP4R3AQ6IN85 833 aa10.29□□□□□ -0.76
VSIG1-201ENST00000217957 ATRIPQ8WXE1 791 aa10.29□□□□□ -0.76
VSIG1-201ENST00000217957 SLC7A3Q8WY07 619 aa10.29□□□□□ -0.76
VSIG1-201ENST00000217957 SNX21Q969T3 373 aa10.29□□□□□ -0.76
VSIG1-201ENST00000217957 FBXO2Q9UK22 296 aaPredicted RBP10.29□□□□□ -0.76
VSIG1-201ENST00000217957 NCOA3Q9Y6Q9 1424 aa10.28□□□□□ -0.76
VSIG1-201ENST00000217957 LRRIQ1Q96JM4 1722 aa10.28□□□□□ -0.76
VSIG1-201ENST00000217957 GTF2A2P52657 109 aa10.28□□□□□ -0.76
VSIG1-201ENST00000217957 USP4Q13107 963 aa10.28□□□□□ -0.76
VSIG1-201ENST00000217957 STAT4Q14765 748 aa10.28□□□□□ -0.76
VSIG1-201ENST00000217957 DNAJC21Q5F1R6 531 aaKnown RBP10.28□□□□□ -0.76
VSIG1-201ENST00000217957 OR8H2Q8N162 312 aa10.28□□□□□ -0.76
VSIG1-201ENST00000217957 ELAC2Q9BQ52 826 aaKnown RBP10.28□□□□□ -0.76
VSIG1-201ENST00000217957 CXorf56Q9H5V9 222 aa10.28□□□□□ -0.76
VSIG1-201ENST00000217957 PHTF1Q9UMS5 762 aa10.28□□□□□ -0.76
VSIG1-201ENST00000217957 SIGLEC1Q9BZZ2 1709 aa10.28□□□□□ -0.76
VSIG1-201ENST00000217957 PYGLP06737 847 aa10.28□□□□□ -0.76
VSIG1-201ENST00000217957 PF4V1P10720 104 aa10.28□□□□□ -0.76
VSIG1-201ENST00000217957 SAFBQ15424 915 aaKnown RBP eCLIP10.28□□□□□ -0.76
VSIG1-201ENST00000217957 PKN3Q6P5Z2 889 aa10.28□□□□□ -0.76
VSIG1-201ENST00000217957 LGR4Q9BXB1 951 aa10.28□□□□□ -0.76
VSIG1-201ENST00000217957 ZFATQ9P243 1243 aa10.28□□□□□ -0.76
VSIG1-201ENST00000217957 AKAP2Q9Y2D5 859 aa10.28□□□□□ -0.76
VSIG1-201ENST00000217957 DENND4BO75064 1496 aaPredicted RBP10.28□□□□□ -0.76
VSIG1-201ENST00000217957 CROCC2H7BZ55 1655 aa10.27□□□□□ -0.76
VSIG1-201ENST00000217957 MT-CO1P00395 513 aa10.27□□□□□ -0.76
VSIG1-201ENST00000217957 PF4P02776 101 aa10.27□□□□□ -0.76
VSIG1-201ENST00000217957 STT3AP46977 705 aa10.27□□□□□ -0.76
VSIG1-201ENST00000217957 FAM135BQ49AJ0 1406 aa10.27□□□□□ -0.76
VSIG1-201ENST00000217957 MYOM3Q5VTT5 1437 aa10.27□□□□□ -0.76
VSIG1-201ENST00000217957 CHRDL2Q6WN34 429 aa10.27□□□□□ -0.76
VSIG1-201ENST00000217957 GK5Q6ZS86 529 aa10.27□□□□□ -0.76
VSIG1-201ENST00000217957 LRP10Q7Z4F1 713 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms