RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 FBXL16Q8N461 479 aa11.02□□□□□ -0.65
TUBB1-201ENST00000217133 IGSF22Q8N9C0 903 aa11.02□□□□□ -0.65
TUBB1-201ENST00000217133 SUGCTQ9HAC7 445 aa11.02□□□□□ -0.65
TUBB1-201ENST00000217133 PHRF1Q9P1Y6 1649 aaKnown RBP11.02□□□□□ -0.65
TUBB1-201ENST00000217133 POLR2DO15514 142 aaKnown RBP11.02□□□□□ -0.65
TUBB1-201ENST00000217133 N4BP1O75113 896 aaKnown RBP11.02□□□□□ -0.65
TUBB1-201ENST00000217133 GTF2A1P52655 376 aaPredicted RBP11.02□□□□□ -0.65
TUBB1-201ENST00000217133 PTPAQ15257 358 aa11.02□□□□□ -0.65
TUBB1-201ENST00000217133 SKIDA1Q1XH10 827 aa11.02□□□□□ -0.65
TUBB1-201ENST00000217133 TTC31Q49AM3 519 aaPredicted RBP11.02□□□□□ -0.65
TUBB1-201ENST00000217133 FILIP1LQ4L180 1135 aa11.02□□□□□ -0.65
TUBB1-201ENST00000217133 ENOX1Q8TC92 643 aaKnown RBP11.02□□□□□ -0.65
TUBB1-201ENST00000217133 ZNF594Q96JF6 807 aaPredicted RBP11.02□□□□□ -0.65
TUBB1-201ENST00000217133 COL16A1Q07092 1604 aaPredicted RBP11.02□□□□□ -0.65
TUBB1-201ENST00000217133 MRC1P22897 1456 aa11.01□□□□□ -0.65
TUBB1-201ENST00000217133 SNRPA1P09661 255 aaKnown RBP11.01□□□□□ -0.65
TUBB1-201ENST00000217133 BMP6P22004 513 aa11.01□□□□□ -0.65
TUBB1-201ENST00000217133 ANTXR2P58335 489 aa11.01□□□□□ -0.65
TUBB1-201ENST00000217133 LRRC24Q50LG9 513 aa11.01□□□□□ -0.65
TUBB1-201ENST00000217133 HNRNPLLQ8WVV9 542 aaKnown RBP11.01□□□□□ -0.65
TUBB1-201ENST00000217133 PNKPQ96T60 521 aa11.01□□□□□ -0.65
TUBB1-201ENST00000217133 CARD10Q9BWT7 1032 aa11.01□□□□□ -0.65
TUBB1-201ENST00000217133 ANKZF1Q9H8Y5 726 aa11.01□□□□□ -0.65
TUBB1-201ENST00000217133 SERTAD1Q9UHV2 236 aa11.01□□□□□ -0.65
TUBB1-201ENST00000217133 ANGEL1Q9UNK9 670 aaKnown RBP11.01□□□□□ -0.65
TUBB1-201ENST00000217133 ADGRG1Q9Y653 693 aa11.01□□□□□ -0.65
TUBB1-201ENST00000217133 AHDC1Q5TGY3 1603 aaPredicted RBP11.01□□□□□ -0.65
TUBB1-201ENST00000217133 KDM3BQ7LBC6 1761 aa11.01□□□□□ -0.65
TUBB1-201ENST00000217133 EYA2O00167 538 aa11.01□□□□□ -0.65
TUBB1-201ENST00000217133 ZFYP08048 801 aaPredicted RBP11.01□□□□□ -0.65
TUBB1-201ENST00000217133 TUBB4BP68371 445 aa11.01□□□□□ -0.65
TUBB1-201ENST00000217133 ATG9AQ7Z3C6 839 aa11.01□□□□□ -0.65
TUBB1-201ENST00000217133 ZCRB1Q8TBF4 217 aaKnown RBP11.01□□□□□ -0.65
TUBB1-201ENST00000217133 ZMYM6O95789 1325 aa11.01□□□□□ -0.65
TUBB1-201ENST00000217133 GOLGA8AA7E2F4 631 aa11.01□□□□□ -0.65
TUBB1-201ENST00000217133 STX17P56962 302 aa11.01□□□□□ -0.65
TUBB1-201ENST00000217133 CASP8Q14790 479 aa11.01□□□□□ -0.65
TUBB1-201ENST00000217133 IQUBQ8NA54 791 aa11.01□□□□□ -0.65
TUBB1-201ENST00000217133 GPR108Q9NPR9 543 aa11.01□□□□□ -0.65
TUBB1-201ENST00000217133 USP21Q9UK80 565 aa11.01□□□□□ -0.65
TUBB1-201ENST00000217133 TUBB2AQ13885 445 aa11□□□□□ -0.65
TUBB1-201ENST00000217133 GRAMD1CQ8IYS0 662 aa11□□□□□ -0.65
TUBB1-201ENST00000217133 SLC35F6Q8N357 371 aa11□□□□□ -0.65
TUBB1-201ENST00000217133 PANX2Q96RD6 677 aa11□□□□□ -0.65
TUBB1-201ENST00000217133 TUBB2BQ9BVA1 445 aa11□□□□□ -0.65
TUBB1-201ENST00000217133 SLC26A6Q9BXS9 759 aa11□□□□□ -0.65
TUBB1-201ENST00000217133 SLC52A2Q9HAB3 445 aa11□□□□□ -0.65
TUBB1-201ENST00000217133 MKRN1Q9UHC7 482 aaKnown RBP11□□□□□ -0.65
TUBB1-201ENST00000217133 L1RE1Q9UN81 338 aa11□□□□□ -0.65
TUBB1-201ENST00000217133 ZBTB43O43298 467 aa11□□□□□ -0.65
TUBB1-201ENST00000217133 PHKG2P15735 406 aa11□□□□□ -0.65
TUBB1-201ENST00000217133 RBL2Q08999 1139 aa11□□□□□ -0.65
TUBB1-201ENST00000217133 RAD9BQ6WBX8 426 aa11□□□□□ -0.65
TUBB1-201ENST00000217133 TICAM2Q86XR7 235 aa11□□□□□ -0.65
TUBB1-201ENST00000217133 FAM71BQ8TC56 605 aa11□□□□□ -0.65
TUBB1-201ENST00000217133 NAPGQ99747 312 aaPredicted RBP11□□□□□ -0.65
TUBB1-201ENST00000217133 TEX33O43247 280 aa11□□□□□ -0.65
TUBB1-201ENST00000217133 GPAA1O43292 621 aa11□□□□□ -0.65
TUBB1-201ENST00000217133 PRR29P0C7W0 189 aa11□□□□□ -0.65
TUBB1-201ENST00000217133 ZNF18P17022 549 aa11□□□□□ -0.65
TUBB1-201ENST00000217133 VSNL1P62760 191 aa11□□□□□ -0.65
TUBB1-201ENST00000217133 AKAP17AQ02040 695 aaKnown RBP11□□□□□ -0.65
TUBB1-201ENST00000217133 APPBP2Q92624 585 aa11□□□□□ -0.65
TUBB1-201ENST00000217133 GNL3Q9BVP2 549 aaKnown RBP eCLIP11□□□□□ -0.65
TUBB1-201ENST00000217133 NAA15Q9BXJ9 866 aaKnown RBP11□□□□□ -0.65
TUBB1-201ENST00000217133 RNF216Q9NWF9 866 aaPredicted RBP11□□□□□ -0.65
TUBB1-201ENST00000217133 ANKRD65E5RJM6 399 aa10.99□□□□□ -0.65
TUBB1-201ENST00000217133 TAF7LQ5H9L4 462 aa10.99□□□□□ -0.65
TUBB1-201ENST00000217133 FOXR1Q6PIV2 292 aa10.99□□□□□ -0.65
TUBB1-201ENST00000217133 MSANTD4Q8NCY6 345 aa10.99□□□□□ -0.65
TUBB1-201ENST00000217133 CDC5LQ99459 802 aaKnown RBP10.99□□□□□ -0.65
TUBB1-201ENST00000217133 MAP3K14Q99558 947 aa10.99□□□□□ -0.65
TUBB1-201ENST00000217133 MYL10Q9BUA6 226 aa10.99□□□□□ -0.65
TUBB1-201ENST00000217133 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.99□□□□□ -0.65
TUBB1-201ENST00000217133 RAB21Q9UL25 225 aa10.99□□□□□ -0.65
TUBB1-201ENST00000217133 MYH15Q9Y2K3 1946 aa10.99□□□□□ -0.65
TUBB1-201ENST00000217133 FAM237AA0A1B0GTK4 181 aa10.99□□□□□ -0.65
TUBB1-201ENST00000217133 EIF3CLB5ME19 914 aaKnown RBP10.99□□□□□ -0.65
TUBB1-201ENST00000217133 MAGEA9P43362 315 aa10.99□□□□□ -0.65
TUBB1-201ENST00000217133 NR1I3Q14994 352 aa10.99□□□□□ -0.65
TUBB1-201ENST00000217133 PLBD2Q8NHP8 589 aa10.99□□□□□ -0.65
TUBB1-201ENST00000217133 EIF3CQ99613 913 aaKnown RBP10.99□□□□□ -0.65
TUBB1-201ENST00000217133 PUS7LQ9H0K6 701 aaKnown RBP10.99□□□□□ -0.65
TUBB1-201ENST00000217133 CWC25Q9NXE8 425 aaPredicted RBP10.99□□□□□ -0.65
TUBB1-201ENST00000217133 A0A0U1RQJ8 604 aa10.99□□□□□ -0.65
TUBB1-201ENST00000217133 TUBBP07437 444 aa10.99□□□□□ -0.65
TUBB1-201ENST00000217133 USP5P45974 858 aa10.99□□□□□ -0.65
TUBB1-201ENST00000217133 SSRP1Q08945 709 aaKnown RBP10.99□□□□□ -0.65
TUBB1-201ENST00000217133 SLC9C2Q5TAH2 1124 aa10.99□□□□□ -0.65
TUBB1-201ENST00000217133 ICE2Q659A1 982 aa10.99□□□□□ -0.65
TUBB1-201ENST00000217133 KANK3Q6NY19 840 aa10.99□□□□□ -0.65
TUBB1-201ENST00000217133 APOA5Q6Q788 366 aa10.99□□□□□ -0.65
TUBB1-201ENST00000217133 IFNL2Q8IZJ0 200 aa10.99□□□□□ -0.65
TUBB1-201ENST00000217133 RGS22Q8NE09 1264 aa10.99□□□□□ -0.65
TUBB1-201ENST00000217133 ATRIPQ8WXE1 791 aa10.99□□□□□ -0.65
TUBB1-201ENST00000217133 FAM204AQ9H8W3 233 aa10.99□□□□□ -0.65
TUBB1-201ENST00000217133 TTF2Q9UNY4 1162 aaKnown RBP10.99□□□□□ -0.65
TUBB1-201ENST00000217133 TFRCP02786 760 aaKnown RBP10.98□□□□□ -0.65
TUBB1-201ENST00000217133 NOP2P46087 812 aaKnown RBP10.98□□□□□ -0.65
TUBB1-201ENST00000217133 PLCD1P51178 756 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms