RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 MRPL44Q9H9J2 332 aaKnown RBP12.71□□□□□ -0.37
ACTN1-201ENST00000193403 MAN1B1Q9UKM7 699 aa12.71□□□□□ -0.37
ACTN1-201ENST00000193403 SH3TC1Q8TE82 1336 aa12.71□□□□□ -0.37
ACTN1-201ENST00000193403 CUTAO60888 179 aa12.71□□□□□ -0.37
ACTN1-201ENST00000193403 CASP14P31944 242 aa12.71□□□□□ -0.37
ACTN1-201ENST00000193403 MEX3CQ5U5Q3 659 aaKnown RBP12.71□□□□□ -0.37
ACTN1-201ENST00000193403 METTL16Q86W50 562 aaKnown RBP12.71□□□□□ -0.37
ACTN1-201ENST00000193403 MIGA1Q8NAN2 632 aa12.71□□□□□ -0.37
ACTN1-201ENST00000193403 APPBP2Q92624 585 aa12.71□□□□□ -0.37
ACTN1-201ENST00000193403 PLIN2Q99541 437 aa12.71□□□□□ -0.37
ACTN1-201ENST00000193403 CENPHQ9H3R5 247 aa12.71□□□□□ -0.37
ACTN1-201ENST00000193403 JAG2Q9Y219 1238 aa12.71□□□□□ -0.37
ACTN1-201ENST00000193403 FMR1Q06787 632 aaKnown RBP eCLIP12.71□□□□□ -0.384e-6■■■□□ 17.6
ACTN1-201ENST00000193403 RBL2Q08999 1139 aa12.71□□□□□ -0.38
ACTN1-201ENST00000193403 RTN1Q16799 776 aa12.71□□□□□ -0.38
ACTN1-201ENST00000193403 SENP2Q9HC62 589 aa12.71□□□□□ -0.38
ACTN1-201ENST00000193403 JADE2Q9NQC1 790 aa12.71□□□□□ -0.38
ACTN1-201ENST00000193403 LCMT1Q9UIC8 334 aa12.71□□□□□ -0.38
ACTN1-201ENST00000193403 AXIN2Q9Y2T1 843 aa12.71□□□□□ -0.38
ACTN1-201ENST00000193403 STX10O60499 249 aa12.7□□□□□ -0.38
ACTN1-201ENST00000193403 XBP1P17861 261 aa12.7□□□□□ -0.38
ACTN1-201ENST00000193403 CDC27P30260 824 aa12.7□□□□□ -0.38
ACTN1-201ENST00000193403 TTC31Q49AM3 519 aaPredicted RBP12.7□□□□□ -0.38
ACTN1-201ENST00000193403 NCAPH2Q6IBW4 605 aa12.7□□□□□ -0.38
ACTN1-201ENST00000193403 TRIM65Q6PJ69 517 aa12.7□□□□□ -0.38
ACTN1-201ENST00000193403 PSMB7Q99436 277 aa12.7□□□□□ -0.38
ACTN1-201ENST00000193403 TRMT112Q9UI30 125 aaKnown RBP12.7□□□□□ -0.38
ACTN1-201ENST00000193403 ERBB3P21860 1342 aa12.7□□□□□ -0.38
ACTN1-201ENST00000193403 GRIN1Q05586 938 aa12.7□□□□□ -0.38
ACTN1-201ENST00000193403 SCARF1Q14162 830 aa12.7□□□□□ -0.38
ACTN1-201ENST00000193403 NOC3LQ8WTT2 800 aaKnown RBP12.7□□□□□ -0.38
ACTN1-201ENST00000193403 DEF6Q9H4E7 631 aa12.7□□□□□ -0.38
ACTN1-201ENST00000193403 SYNRGQ9UMZ2 1314 aa12.7□□□□□ -0.38
ACTN1-201ENST00000193403 A0A0U1RQJ8 604 aa12.7□□□□□ -0.38
ACTN1-201ENST00000193403 IVLP07476 585 aa12.7□□□□□ -0.38
ACTN1-201ENST00000193403 MRPS25P82663 173 aaKnown RBP12.7□□□□□ -0.38
ACTN1-201ENST00000193403 ZNF174Q15697 407 aa12.7□□□□□ -0.38
ACTN1-201ENST00000193403 SRGAP1Q7Z6B7 1085 aa12.7□□□□□ -0.38
ACTN1-201ENST00000193403 ATRIPQ8WXE1 791 aa12.7□□□□□ -0.38
ACTN1-201ENST00000193403 H3BQF6 201 aa12.69□□□□□ -0.38
ACTN1-201ENST00000193403 ZFYP08048 801 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-201ENST00000193403 ACTN2P35609 894 aa12.69□□□□□ -0.38
ACTN1-201ENST00000193403 TTC19Q6DKK2 380 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-201ENST00000193403 WASF1Q92558 559 aa12.69□□□□□ -0.38
ACTN1-201ENST00000193403 NAPGQ99747 312 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-201ENST00000193403 FAM107BQ9H098 131 aa12.69□□□□□ -0.38
ACTN1-201ENST00000193403 MRFAP1Q9Y605 127 aa12.69□□□□□ -0.38
ACTN1-201ENST00000193403 FER1L4A9Z1Z3 1794 aa12.69□□□□□ -0.38
ACTN1-201ENST00000193403 CDC25AP30304 524 aa12.69□□□□□ -0.38
ACTN1-201ENST00000193403 WTAPQ15007 396 aa12.69□□□□□ -0.38
ACTN1-201ENST00000193403 APOA5Q6Q788 366 aa12.69□□□□□ -0.38
ACTN1-201ENST00000193403 MFSD6Q6ZSS7 791 aa12.69□□□□□ -0.38
ACTN1-201ENST00000193403 PLBD2Q8NHP8 589 aa12.69□□□□□ -0.38
ACTN1-201ENST00000193403 GOLGA5Q8TBA6 731 aa12.69□□□□□ -0.38
ACTN1-201ENST00000193403 RANBP6O60518 1105 aaKnown RBP12.69□□□□□ -0.38
ACTN1-201ENST00000193403 ERCC3P19447 782 aa12.69□□□□□ -0.38
ACTN1-201ENST00000193403 KRT9P35527 623 aa12.69□□□□□ -0.38
ACTN1-201ENST00000193403 IRX3P78415 501 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-201ENST00000193403 FAM182BQ5T319 152 aa12.69□□□□□ -0.38
ACTN1-201ENST00000193403 MLKLQ8NB16 471 aa12.69□□□□□ -0.38
ACTN1-201ENST00000193403 IPO4Q8TEX9 1081 aaKnown RBP12.69□□□□□ -0.38
ACTN1-201ENST00000193403 FAM204AQ9H8W3 233 aa12.69□□□□□ -0.38
ACTN1-201ENST00000193403 BRMS1Q9HCU9 246 aa12.69□□□□□ -0.38
ACTN1-201ENST00000193403 POTEB2H3BUK9 544 aa12.68□□□□□ -0.38
ACTN1-201ENST00000193403 PDIA6Q15084 440 aa12.68□□□□□ -0.38
ACTN1-201ENST00000193403 C8orf37Q96NL8 207 aa12.68□□□□□ -0.38
ACTN1-201ENST00000193403 MACROD2A1Z1Q3 448 aa12.68□□□□□ -0.38
ACTN1-201ENST00000193403 CCDC151A5D8V7 595 aa12.68□□□□□ -0.38
ACTN1-201ENST00000193403 PRDM1O75626 825 aa12.68□□□□□ -0.38
ACTN1-201ENST00000193403 UBXN1Q04323 297 aa12.68□□□□□ -0.38
ACTN1-201ENST00000193403 BRD3Q15059 726 aa12.68□□□□□ -0.38
ACTN1-201ENST00000193403 CCDC93Q567U6 631 aa12.68□□□□□ -0.38
ACTN1-201ENST00000193403 USP49Q70CQ1 688 aa12.68□□□□□ -0.38
ACTN1-201ENST00000193403 NOSTRINQ8IVI9 506 aa12.68□□□□□ -0.38
ACTN1-201ENST00000193403 GSPT2Q8IYD1 628 aaKnown RBP12.68□□□□□ -0.38
ACTN1-201ENST00000193403 ARMT1Q9H993 441 aa12.68□□□□□ -0.38
ACTN1-201ENST00000193403 VPS54Q9P1Q0 977 aa12.68□□□□□ -0.38
ACTN1-201ENST00000193403 MAGEC2Q9UBF1 373 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-201ENST00000193403 CDC23Q9UJX2 597 aa12.68□□□□□ -0.38
ACTN1-201ENST00000193403 CEP131Q9UPN4 1083 aa12.68□□□□□ -0.38
ACTN1-201ENST00000193403 PCDHB6Q9Y5E3 794 aa12.68□□□□□ -0.38
ACTN1-201ENST00000193403 SPATA31D1Q6ZQQ2 1576 aa12.68□□□□□ -0.38
ACTN1-201ENST00000193403 CEMIPQ8WUJ3 1361 aa12.68□□□□□ -0.38
ACTN1-201ENST00000193403 MBD4O95243 580 aa12.68□□□□□ -0.38
ACTN1-201ENST00000193403 ENOX2Q16206 610 aaKnown RBP12.68□□□□□ -0.38
ACTN1-201ENST00000193403 CYB5R4Q7L1T6 521 aa12.68□□□□□ -0.38
ACTN1-201ENST00000193403 TRIM75PA6NK02 468 aa12.67□□□□□ -0.38
ACTN1-201ENST00000193403 RFX5P48382 616 aaPredicted RBP12.67□□□□□ -0.38
ACTN1-201ENST00000193403 TBC1D10CQ8IV04 446 aa12.67□□□□□ -0.38
ACTN1-201ENST00000193403 MAGEB6Q8N7X4 407 aa12.67□□□□□ -0.38
ACTN1-201ENST00000193403 TC2NQ8N9U0 490 aa12.67□□□□□ -0.38
ACTN1-201ENST00000193403 BPIFA3Q9BQP9 254 aa12.67□□□□□ -0.38
ACTN1-201ENST00000193403 ZNHIT6Q9NWK9 470 aaKnown RBP12.67□□□□□ -0.38
ACTN1-201ENST00000193403 ZNF532Q9HCE3 1301 aa12.67□□□□□ -0.38
ACTN1-201ENST00000193403 E2F4Q16254 413 aa12.67□□□□□ -0.38
ACTN1-201ENST00000193403 CCDC181Q5TID7 509 aa12.67□□□□□ -0.38
ACTN1-201ENST00000193403 BRINP3Q76B58 766 aa12.67□□□□□ -0.38
ACTN1-201ENST00000193403 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.67□□□□□ -0.38
ACTN1-201ENST00000193403 NACAP1Q9BZK3 213 aa12.67□□□□□ -0.38
ACTN1-201ENST00000193403 CSRNP2Q9H175 543 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms