RNA–Protein interactions for RNA: ENST00000053243.5

TNFRSF17-201, Transcript of TNF receptor superfamily member 17, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TNFRSF17, Length 994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17-201ENST00000053243 TAF5LO75529 589 aa7.64□□□□□ -1.19
TNFRSF17-201ENST00000053243 NTSR2O95665 410 aa7.64□□□□□ -1.19
TNFRSF17-201ENST00000053243 IFIT1P09914 478 aaKnown RBP7.64□□□□□ -1.19
TNFRSF17-201ENST00000053243 ITGA6P23229 1130 aa7.64□□□□□ -1.19
TNFRSF17-201ENST00000053243 ANKRD1Q15327 319 aa7.64□□□□□ -1.19
TNFRSF17-201ENST00000053243 TAF7LQ5H9L4 462 aa7.64□□□□□ -1.19
TNFRSF17-201ENST00000053243 ZMYM1Q5SVZ6 1142 aa7.64□□□□□ -1.19
TNFRSF17-201ENST00000053243 CREB3L3Q68CJ9 461 aa7.64□□□□□ -1.19
TNFRSF17-201ENST00000053243 RUFY3Q7L099 469 aa7.64□□□□□ -1.19
TNFRSF17-201ENST00000053243 CYP4X1Q8N118 509 aa7.64□□□□□ -1.19
TNFRSF17-201ENST00000053243 FAM227BQ96M60 508 aa7.64□□□□□ -1.19
TNFRSF17-201ENST00000053243 UTP14AQ9BVJ6 771 aaKnown RBP7.64□□□□□ -1.19
TNFRSF17-201ENST00000053243 USP21Q9UK80 565 aa7.64□□□□□ -1.19
TNFRSF17-201ENST00000053243 LIMCH1Q9UPQ0 1083 aa7.64□□□□□ -1.19
TNFRSF17-201ENST00000053243 CCDC9Q9Y3X0 531 aaKnown RBP7.64□□□□□ -1.19
TNFRSF17-201ENST00000053243 CYP46A1Q9Y6A2 500 aa7.64□□□□□ -1.19
TNFRSF17-201ENST00000053243 DLEC1Q9Y238 1755 aa7.64□□□□□ -1.19
TNFRSF17-201ENST00000053243 NRXN2Q9P2S2 1712 aa7.64□□□□□ -1.19
TNFRSF17-201ENST00000053243 TTC24A2A3L6 582 aaPredicted RBP7.63□□□□□ -1.19
TNFRSF17-201ENST00000053243 SLC27A2O14975 620 aa7.63□□□□□ -1.19
TNFRSF17-201ENST00000053243 GFRA3O60609 400 aa7.63□□□□□ -1.19
TNFRSF17-201ENST00000053243 PDE8BO95263 885 aa7.63□□□□□ -1.19
TNFRSF17-201ENST00000053243 ALDH1A1P00352 501 aa7.63□□□□□ -1.19
TNFRSF17-201ENST00000053243 HMGB1P09429 215 aaKnown RBP7.63□□□□□ -1.19
TNFRSF17-201ENST00000053243 UQCRFS1P1P0C7P4 283 aa7.63□□□□□ -1.19
TNFRSF17-201ENST00000053243 FGFR2P21802 821 aa7.63□□□□□ -1.19
TNFRSF17-201ENST00000053243 GPTP24298 496 aa7.63□□□□□ -1.19
TNFRSF17-201ENST00000053243 ARID4AP29374 1257 aaPredicted RBP7.63□□□□□ -1.19
TNFRSF17-201ENST00000053243 NCOA4Q13772 614 aa7.63□□□□□ -1.19
TNFRSF17-201ENST00000053243 ARID5BQ14865 1188 aa7.63□□□□□ -1.19
TNFRSF17-201ENST00000053243 TTF1Q15361 905 aaPredicted RBP7.63□□□□□ -1.19
TNFRSF17-201ENST00000053243 ATP2B3Q16720 1220 aa7.63□□□□□ -1.19
TNFRSF17-201ENST00000053243 CCDC152Q4G0S7 254 aa7.63□□□□□ -1.19
TNFRSF17-201ENST00000053243 ZSCAN25Q6NSZ9 544 aa7.63□□□□□ -1.19
TNFRSF17-201ENST00000053243 LDHAL6AQ6ZMR3 332 aa7.63□□□□□ -1.19
TNFRSF17-201ENST00000053243 SNIP1Q8TAD8 396 aaKnown RBP7.63□□□□□ -1.19
TNFRSF17-201ENST00000053243 SLC10A4Q96EP9 437 aa7.63□□□□□ -1.19
TNFRSF17-201ENST00000053243 XAGE2Q96GT9 111 aa7.63□□□□□ -1.19
TNFRSF17-201ENST00000053243 ZNF594Q96JF6 807 aaPredicted RBP7.63□□□□□ -1.19
TNFRSF17-201ENST00000053243 C8orf37Q96NL8 207 aa7.63□□□□□ -1.19
TNFRSF17-201ENST00000053243 PUS3Q9BZE2 481 aaKnown RBP7.63□□□□□ -1.19
TNFRSF17-201ENST00000053243 IRX2Q9BZI1 471 aaPredicted RBP7.63□□□□□ -1.19
TNFRSF17-201ENST00000053243 GREM2Q9H772 168 aa7.63□□□□□ -1.19
TNFRSF17-201ENST00000053243 TOR4AQ9NXH8 423 aa7.63□□□□□ -1.19
TNFRSF17-201ENST00000053243 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.63□□□□□ -1.19
TNFRSF17-201ENST00000053243 ECM29Q5VYK3 1845 aa7.63□□□□□ -1.19
TNFRSF17-201ENST00000053243 CARMIL3Q8ND23 1372 aa7.62□□□□□ -1.19
TNFRSF17-201ENST00000053243 ZMYM6O95789 1325 aa7.62□□□□□ -1.19
TNFRSF17-201ENST00000053243 RNF113AO15541 343 aaKnown RBP7.62□□□□□ -1.19
TNFRSF17-201ENST00000053243 IGSF3O75054 1194 aa7.62□□□□□ -1.19
TNFRSF17-201ENST00000053243 RPS6KA4O75676 772 aa7.62□□□□□ -1.19
TNFRSF17-201ENST00000053243 BAG4O95429 457 aaKnown RBP7.62□□□□□ -1.19
TNFRSF17-201ENST00000053243 BRD1O95696 1058 aa7.62□□□□□ -1.19
TNFRSF17-201ENST00000053243 CASTP20810 708 aaKnown RBP7.62□□□□□ -1.19
TNFRSF17-201ENST00000053243 AK2P54819 239 aa7.62□□□□□ -1.19
TNFRSF17-201ENST00000053243 TIMM10P62072 90 aa7.62□□□□□ -1.19
TNFRSF17-201ENST00000053243 SF3B3Q15393 1217 aaKnown RBP7.62□□□□□ -1.19
TNFRSF17-201ENST00000053243 PUM3Q15397 648 aaKnown RBP7.62□□□□□ -1.19
TNFRSF17-201ENST00000053243 MAP7D1Q3KQU3 841 aa7.62□□□□□ -1.19
TNFRSF17-201ENST00000053243 METTL24Q5JXM2 366 aa7.62□□□□□ -1.19
TNFRSF17-201ENST00000053243 SLC10A5Q5PT55 438 aa7.62□□□□□ -1.19
TNFRSF17-201ENST00000053243 TTC39AQ5SRH9 613 aa7.62□□□□□ -1.19
TNFRSF17-201ENST00000053243 SUSD4Q5VX71 490 aa7.62□□□□□ -1.19
TNFRSF17-201ENST00000053243 PRPF40BQ6NWY9 871 aaKnown RBP7.62□□□□□ -1.19
TNFRSF17-201ENST00000053243 ZNF589Q86UQ0 364 aaPredicted RBP7.62□□□□□ -1.19
TNFRSF17-201ENST00000053243 FBXL16Q8N461 479 aa7.62□□□□□ -1.19
TNFRSF17-201ENST00000053243 LPIN2Q92539 896 aa7.62□□□□□ -1.19
TNFRSF17-201ENST00000053243 ACSBG1Q96GR2 724 aa7.62□□□□□ -1.19
TNFRSF17-201ENST00000053243 NEUROD6Q96NK8 337 aa7.62□□□□□ -1.19
TNFRSF17-201ENST00000053243 UPF3BQ9BZI7 483 aaKnown RBP7.62□□□□□ -1.19
TNFRSF17-201ENST00000053243 MKRN1Q9UHC7 482 aaKnown RBP7.62□□□□□ -1.19
TNFRSF17-201ENST00000053243 CACNA1SQ13698 1873 aa7.62□□□□□ -1.19
TNFRSF17-201ENST00000053243 TNS1Q9HBL0 1735 aaKnown RBP7.61□□□□□ -1.19
TNFRSF17-201ENST00000053243 COL4A1P02462 1669 aa7.61□□□□□ -1.19
TNFRSF17-201ENST00000053243 MAST3O60307 1309 aa7.61□□□□□ -1.19
TNFRSF17-201ENST00000053243 WDR19Q8NEZ3 1342 aa7.61□□□□□ -1.19
TNFRSF17-201ENST00000053243 WDR33Q9C0J8 1336 aaKnown RBP7.61□□□□□ -1.19
TNFRSF17-201ENST00000053243 CARNS1A5YM72 827 aa7.61□□□□□ -1.19
TNFRSF17-201ENST00000053243 TMEM88BA6NKF7 163 aa7.61□□□□□ -1.19
TNFRSF17-201ENST00000053243 J3QL48 77 aa7.61□□□□□ -1.19
TNFRSF17-201ENST00000053243 GOLIM4O00461 696 aa7.61□□□□□ -1.19
TNFRSF17-201ENST00000053243 NRG2O14511 850 aaPredicted RBP7.61□□□□□ -1.19
TNFRSF17-201ENST00000053243 LZTS3O60299 673 aaPredicted RBP7.61□□□□□ -1.19
TNFRSF17-201ENST00000053243 RPS6KB1P23443 525 aa7.61□□□□□ -1.19
TNFRSF17-201ENST00000053243 KCNJ4P48050 445 aa7.61□□□□□ -1.19
TNFRSF17-201ENST00000053243 KLHL40Q2TBA0 621 aa7.61□□□□□ -1.19
TNFRSF17-201ENST00000053243 TMED8Q6PL24 325 aaPredicted RBP7.61□□□□□ -1.19
TNFRSF17-201ENST00000053243 BLOC1S2Q6QNY1 142 aa7.61□□□□□ -1.19
TNFRSF17-201ENST00000053243 DDX46Q7L014 1031 aaKnown RBP7.61□□□□□ -1.19
TNFRSF17-201ENST00000053243 ZGPATQ8N5A5 531 aaKnown RBP7.61□□□□□ -1.19
TNFRSF17-201ENST00000053243 LINC00116Q8NCU8 138 aa7.61□□□□□ -1.19
TNFRSF17-201ENST00000053243 APPBP2Q92624 585 aa7.61□□□□□ -1.19
TNFRSF17-201ENST00000053243 CHMP4CQ96CF2 233 aa7.61□□□□□ -1.19
TNFRSF17-201ENST00000053243 JAKMIP1Q96N16 626 aaKnown RBP7.61□□□□□ -1.19
TNFRSF17-201ENST00000053243 CDC5LQ99459 802 aaKnown RBP7.61□□□□□ -1.19
TNFRSF17-201ENST00000053243 DNAJC2Q99543 621 aaKnown RBP7.61□□□□□ -1.19
TNFRSF17-201ENST00000053243 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.61□□□□□ -1.19
TNFRSF17-201ENST00000053243 NYXQ9GZU5 481 aa7.61□□□□□ -1.19
TNFRSF17-201ENST00000053243 CNNM1Q9NRU3 951 aa7.61□□□□□ -1.19
TNFRSF17-201ENST00000053243 PDRG1Q9NUG6 133 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms