RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Kifc2O08672 792 aa10.31□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Krt80Q0VBK2 452 aa10.31□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Ifit1bl2Q3U687 466 aa10.31□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Ppp1r7Q3UM45 361 aa10.31□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Cnnm4Q69ZF7 771 aa10.31□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Krt222Q8CCX5 294 aa10.31□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Krt5Q922U2 580 aa10.31□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Pdzd4Q9QY39 772 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 CaluO35887 315 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Mx1P09922 631 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Senp1P59110 640 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Tbc1d32Q3URV1 1296 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Slf2Q6P9P0 1278 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Mtrf1lQ8BJU9 373 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Pabpn1Q8CCS6 302 aaKnown RBP10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Spata2Q8K004 515 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Hspa1lP16627 641 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Fam207aP58468 219 aaKnown RBP10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Pfdn4Q3UWL8 134 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Anapc5Q8BTZ4 740 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 C130026I21RikQ8C898 291 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Bst2Q8R2Q8 172 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Rtn3Q9ES97 964 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 DgkiD3YWQ0 1071 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Arhgap30Q640N3 1101 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Brd2Q7JJ13 798 aaKnown RBP10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Dzip3Q7TPV2 1204 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Daam1Q8BPM0 1077 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Tut1Q8R3F9 869 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 LlphQ9D945 130 aaKnown RBP10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Dnajb7Q9QYI8 312 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Zkscan5Q9Z1D8 819 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Kank1E9Q238 1360 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Ctnna1P26231 906 aaKnown RBP10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Ppp2r5aQ6PD03 486 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Nrbf2Q8VCQ3 287 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 FanccP50652 591 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Plekhm2Q80TQ5 1018 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 4932411N23RikQ8C0S0 470 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Ptcd1Q8C2E4 695 aaKnown RBP10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Tsc1Q9EP53 1161 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Phlpp2Q8BXA7 1320 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Pcyt1aP49586 367 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Faf1P54731 649 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Fam47cQ14BE7 430 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Gzf1Q4VBD9 706 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Snx1Q9WV80 522 aa10.3□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Rbm8a2A0A0N4SUH6 174 aa10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Cfap70D3YVL2 1141 aa10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Pde4dQ01063 747 aa10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Arhgef2Q60875 985 aa10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Wdr3Q8BHB4 942 aaKnown RBP10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Nop2Q922K7 793 aaKnown RBP10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Rbm8aQ9CWZ3 174 aa10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Rmi1Q9D4G9 616 aa10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Gm10110D3Z5M2 615 aa10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 CopeO89079 308 aa10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Gm1604bQ3TRG0 118 aa10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Trim80Q3V061 624 aa10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Ctnna3Q65CL1 895 aa10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Mrps26Q80ZS3 200 aa10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 TxlngQ8BHN1 524 aa10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Arap1Q4LDD4 1452 aa10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Znf568E9PYI1 671 aa10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 ItkQ03526 625 aa10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Pfdn6Q03958 127 aa10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Trim71Q1PSW8 855 aaKnown RBP10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Skap1Q3UUV5 355 aa10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Smc5Q8CG46 1101 aaKnown RBP10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Osbpl1aQ91XL9 950 aa10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Cd274Q9EP73 290 aa10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Ppp4r1Q8K2V1 951 aa10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Kif9Q9WV04 790 aa10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Syne3Q4FZC9 975 aa10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Ano1Q8BHY3 960 aa10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Ddx41Q91VN6 622 aaKnown RBP10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Lrp2bpQ9D4C6 346 aa10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Hspa8P63017 646 aaKnown RBP10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Fam180aQ8BR21 173 aa10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Atxn3Q9CVD2 355 aa10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Asxl1P59598 1514 aa10.29□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Rbbp8nlA2ABX0 614 aa10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Rps6ka1P18653 724 aa10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Sec23ipQ6NZC7 998 aa10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Pym1Q8CHP5 203 aaKnown RBP10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Kcnh5Q920E3 988 aa10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Acsl3Q9CZW4 720 aaKnown RBP10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Pole3Q9JKP7 145 aa10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Trim12cD3Z3L3 497 aa10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Serpini1O35684 410 aa10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Gucy2fQ5SDA5 1108 aa10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Crybg3Q80W49 1005 aa10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Znf428Q8C1M2 176 aa10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Plcd1Q8R3B1 756 aa10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Mrps9Q9D7N3 390 aaKnown RBP10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Ankrd2Q9WV06 328 aa10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Zmym4A2A791 1549 aaKnown RBP10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Pdzrn4E9PUZ9 1014 aa10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Impdh2P24547 514 aa10.28□□□□□ -0.76
Col6a5-201ENSMUST00000165165 Slc8a1P70414 970 aa10.28□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms