RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Rai14Q9EP71 979 aaKnown RBP12.28□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Zranb2Q9R020 330 aaKnown RBP12.28□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Atp1a4Q9WV27 1032 aa12.28□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Cdc27A2A6Q5 825 aa12.28□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Dctn1O08788 1281 aa12.28□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Cyp19a1P28649 503 aa12.28□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Myl10Q62082 202 aa12.28□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Slc20a2Q80UP8 656 aa12.28□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Zswim4Q8C7B8 1101 aa12.28□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Vps53Q8CCB4 832 aa12.28□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Evc2Q8K1G2 1220 aa12.28□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Ppil4Q9CXG3 492 aaKnown RBP12.28□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Pde4bB1AWC9 736 aa12.27□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Kcnd1Q03719 651 aa12.27□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Epc1Q8C9X6 813 aa12.27□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 ImmtQ8CAQ8 757 aaKnown RBP12.27□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Letm1Q9Z2I0 738 aa12.27□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Dapk3O54784 448 aa12.27□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Me1P06801 572 aa12.27□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 EmbP21995 330 aa12.27□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Hspa4Q61316 841 aa12.27□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Fbxo41Q6NS60 873 aa12.27□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 AbraQ8BUZ1 375 aa12.27□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Armcx6Q8K3A6 301 aa12.27□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Ccdc12Q8R344 166 aaKnown RBP12.27□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Eif2ak3Q9Z2B5 1114 aa12.27□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Cyp2c23E9Q5K4 494 aa12.26□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Rhbdl3P58873 404 aa12.26□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Specc1lQ2KN98 1118 aaKnown RBP12.26□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Clca2Q8BG22 942 aa12.26□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Zc3h6Q8BYK8 1177 aa12.26□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Tubgcp2Q921G8 905 aa12.26□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 MycbpQ9EQS3 103 aa12.26□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Ccne2Q9Z238 404 aa12.26□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Sik3Q6P4S6 1311 aa12.26□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Gm5624F6ZZG8 207 aa12.26□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 PnnO35691 725 aaKnown RBP12.26□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Ftl2P49945 183 aa12.26□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Map9Q3TRR0 646 aa12.26□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Ifit1bl2Q3U687 466 aa12.26□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Tpcn2Q8BWC0 731 aa12.26□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Gdap1l1Q8VE33 370 aa12.26□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 BaatQ91X34 420 aa12.26□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Appbp2Q9DAX9 585 aa12.26□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Ccdc97Q9DBT3 340 aa12.26□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 DonsonQ9QXP4 560 aa12.26□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Anxa1P10107 346 aaKnown RBP12.26□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Epha2Q03145 977 aa12.26□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Pcdhb14Q6PB90 796 aa12.26□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Map10Q8BJS7 891 aa12.26□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Srp68Q8BMA6 625 aaKnown RBP12.26□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Zkscan8Q8BSL0 588 aa12.26□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Brd3Q8K2F0 726 aaKnown RBP12.26□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 4930519G04RikQ9CPT7 205 aa12.26□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Plagl1Q9JLQ4 704 aa12.26□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Carmil3Q3UFQ8 1375 aa12.25□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 A0A1L1SQF0 893 aa12.25□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Tbc1d2B1AVH7 922 aa12.25□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Gm20425E9Q035 978 aaKnown RBP12.25□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Lrrc6O88978 473 aa12.25□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 SrprbP47758 269 aa12.25□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Adck5Q80V03 582 aa12.25□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Ctdspl2Q8BG15 465 aa12.25□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Cnot6lQ8VEG6 555 aa12.25□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Tktl2Q9D4D4 627 aa12.25□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 MicalclQ9D5U9 680 aa12.25□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Mrc1Q61830 1456 aa12.25□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Wdr19Q3UGF1 1341 aa12.25□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Ccng2O08918 344 aa12.25□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Lrriq3Q14DL3 633 aa12.25□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Llgl2Q3TJ91 1027 aa12.25□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Kcnh3Q9WVJ0 1095 aa12.25□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Sall1Q9ER74 1322 aa12.25□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Hap1O35668 628 aa12.24□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Cyp26a1O55127 497 aa12.24□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Atp1b3P97370 278 aa12.24□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Susd4Q8BH32 490 aa12.24□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Haus7Q8BKT8 364 aa12.24□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Cd209bQ8CJ91 325 aa12.24□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Tgs1Q923W1 853 aa12.24□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Prc1Q99K43 603 aaKnown RBP12.24□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 SufuQ9Z0P7 484 aa12.24□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Gm10134F6ZQC6 126 aa12.24□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Metap2O08663 478 aaKnown RBP12.24□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Cops6O88545 324 aa12.24□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Grin1P35438 938 aa12.24□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Gpr182P43142 395 aa12.24□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 ItpripQ3TNL8 555 aa12.24□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Prl2c1Q5SVL9 228 aa12.24□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Acap3Q6NXL5 833 aa12.24□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Prkag3Q8BGM7 489 aa12.24□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Clic6Q8BHB9 596 aa12.24□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Vps16Q920Q4 839 aa12.24□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Filip1Q9CS72 1211 aa12.24□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Gtf2f1Q3THK3 508 aaKnown RBP12.24□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Ankrd13dQ6PD24 605 aa12.24□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 NgdnQ9DB96 315 aaKnown RBP12.24□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Mtmr7Q9Z2C9 660 aa12.24□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Usp35M0QWN7 1009 aa12.23□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Evi5P97366 809 aa12.23□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 26.1 ms