RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Rbm5Q91YE7 815 aaKnown RBP13.02□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Adarb2Q9JI20 745 aa13.02□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Pramel3A2AHA7 463 aa13.02□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Gm7903A2AWL1 463 aa13.02□□□□□ -0.33
Ddx55-201ENSMUST00000071057 AV320801A2AWL3 467 aa13.02□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Prss40A6H6T1 365 aa13.02□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Brpf3B2KF05 1204 aaKnown RBP13.02□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Gm15023L7MUB4 467 aa13.02□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Tuft1O08970 390 aa13.02□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Dnm1P39053 867 aa13.02□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Gzf1Q4VBD9 706 aa13.02□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Gpatch3Q8BIY1 525 aa13.02□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Clec4gQ8BNX1 294 aa13.02□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Cgref1Q8R1U2 281 aa13.02□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Slc14a2Q8R4T9 930 aa13.02□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Stk38Q91VJ4 465 aa13.02□□□□□ -0.33
Ddx55-201ENSMUST00000071057 NsmfQ99NF2 532 aa13.02□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Ccdc47Q9D024 483 aaKnown RBP13.02□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Naaladl2A0A0N4SUJ3 795 aa13.01□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Ces1hD3Z298 562 aa13.01□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Nfatc2ipO09130 412 aa13.01□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Cd3dP04235 173 aa13.01□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Pde11aP0C1Q2 933 aa13.01□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Gnat2P50149 354 aa13.01□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Ccdc34Q3UI66 367 aa13.01□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Ell2Q3UKU1 639 aa13.01□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Spata5Q3UMC0 893 aaKnown RBP13.01□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Hps3Q91VB4 1002 aa13.01□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Zfyve19Q9DAZ9 389 aa13.01□□□□□ -0.33
Ddx55-201ENSMUST00000071057 AatfQ9JKX4 526 aaKnown RBP13.01□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Mmel1Q9JLI3 765 aa13.01□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Wdr19Q3UGF1 1341 aa13.01□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Rgs12Q8CGE9 1381 aa13.01□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Duox1A2AQ92 1551 aa13.01□□□□□ -0.33
Ddx55-201ENSMUST00000071057 NesQ6P5H2 1864 aaKnown RBP13.01□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Zkscan7E9PVW1 718 aa13.01□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Cplx1P63040 134 aa13.01□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Cdcp1Q5U462 833 aa13.01□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Krt40Q6IFX3 439 aa13.01□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Sirt2Q8VDQ8 389 aa13.01□□□□□ -0.33
Ddx55-201ENSMUST00000071057 CpdO89001 1377 aa13.01□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Zfyve9A2A8R0 1397 aa13□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Map3k15A2AQW0 1331 aa13□□□□□ -0.33
Ddx55-201ENSMUST00000071057 CoblQ5NBX1 1337 aaKnown RBP13□□□□□ -0.33
Ddx55-201ENSMUST00000071057 4930523C07RikE9Q2T4 99 aa13□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Cplx2P84086 134 aa13□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Cnnm2Q3TWN3 875 aa13□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Slc44a1Q6X893 653 aa13□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Rassf4Q8CB96 322 aa13□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Snw1Q9CSN1 536 aaKnown RBP13□□□□□ -0.33
Ddx55-201ENSMUST00000071057 SarnpQ9D1J3 210 aaKnown RBP13□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Zfp651E9PZ11 729 aa13□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Q3TYL0 343 aa13□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Suds3Q8BR65 328 aa13□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Zkscan3Q91VW9 553 aa13□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Stag1Q9D3E6 1258 aa13□□□□□ -0.33
Ddx55-201ENSMUST00000071057 WtapQ9ER69 396 aa13□□□□□ -0.33
Ddx55-201ENSMUST00000071057 FAM186AQ9D9R9 1790 aa13□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Cep63Q3UPP8 700 aa12.99□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Cdkl5Q3UTQ8 938 aa12.99□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Hps6Q8BLY7 805 aa12.99□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Srek1Q8BZX4 494 aaKnown RBP12.99□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Cxcl11Q9JHH5 100 aa12.99□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Oas2E9Q9A9 742 aa12.99□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Il15P48346 162 aa12.99□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Bach2P97303 839 aa12.99□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Ccdc162pQ0VG85 912 aa12.99□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Tmem109Q3UBX0 243 aa12.99□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Kiaa0754Q69ZZ9 979 aa12.99□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Glis3Q6XP49 780 aa12.99□□□□□ -0.33
Ddx55-201ENSMUST00000071057 RbsnQ80Y56 783 aa12.99□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Amhr2Q8K592 568 aa12.99□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Mrps25Q9D125 171 aaKnown RBP12.99□□□□□ -0.33
Ddx55-201ENSMUST00000071057 A0A1W2P7S8 802 aa12.98□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Anp32cQ64G17 123 aa12.98□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Brsk2Q69Z98 735 aa12.98□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Cdc5lQ6A068 802 aaKnown RBP12.98□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Ccng2O08918 344 aa12.98□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Sptlc2P97363 560 aaKnown RBP12.98□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Prpf38aQ4FK66 312 aaKnown RBP12.98□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Tbc1d1Q60949 1255 aa12.98□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Fchsd1Q6PFY1 688 aa12.98□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Olfr118Q7TRJ6 321 aa12.98□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Gpr108Q91WD0 569 aa12.98□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Ccdc39Q9D5Y1 937 aa12.98□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Cnpy3Q9DAU1 276 aa12.98□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Dusp10Q9ESS0 483 aa12.98□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Hmx1O70218 332 aa12.98□□□□□ -0.33
Ddx55-201ENSMUST00000071057 U2af2P26369 475 aaKnown RBP12.98□□□□□ -0.33
Ddx55-201ENSMUST00000071057 NfixP70257 488 aa12.98□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Cypt2Q6P924 180 aa12.98□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Prkag3Q8BGM7 489 aa12.98□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Ccdc40Q8BI79 1192 aa12.98□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Terb1Q8C0V1 768 aa12.98□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Ttc27Q8CD92 847 aa12.98□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Kcnj14Q8JZN3 434 aa12.98□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Mx2Q9WVP9 655 aa12.98□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Ubn2Q80WC1 1314 aa12.97□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Gm5592Q3V0A6 857 aa12.97□□□□□ -0.33
Ddx55-201ENSMUST00000071057 Ankrd13dQ6PD24 605 aa12.97□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 96.8 ms