RNA–Protein interactions for RNA: ENSMUST00000052965.6

Nipbl-201, Transcript of Nipped-B-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nipbl, Length 8,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nipbl-201ENSMUST00000052965 Kcnk13Q8R1P5 405 aa11.89□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Ccdc105Q9D4K7 499 aa11.89□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Igf2bp2Q5SF07 592 aaKnown RBP11.89□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Tab2Q99K90 693 aa11.89□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Lrrc74aA0A1Y7VMD6 494 aa11.89□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Rbm12b2Q66JV4 834 aaKnown RBP11.89□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Ints4Q8CIM8 964 aa11.89□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Rdm1Q9CQK3 281 aa11.89□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Tcp1P11983 556 aaKnown RBP11.89□□□□□ -0.51
Nipbl-201ENSMUST00000052965 D130040H23RikQ8BII3 405 aa11.89□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Hexim1Q8R409 356 aaKnown RBP11.89□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Taf7Q9R1C0 341 aa11.89□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Trim17Q7TPM3 477 aa11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Q8VDP2 222 aa11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Vwa3bJ9JI28 736 aa11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Ptpn14Q62130 1189 aa11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Ncoa7Q6DFV7 943 aa11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Zcchc17Q9ESX4 241 aaKnown RBP11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Disp1Q3TDN0 1521 aa11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Eef1bO70251 225 aaKnown RBP11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Fam228aQ8CDW1 299 aa11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Dennd3A2RT67 1274 aa11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 ChkbO55229 394 aa11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Mdh1P14152 334 aa11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Eef2P58252 858 aaKnown RBP11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Anks6Q6GQX6 883 aa11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Fbxo41Q6NS60 873 aa11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Ccdc155Q80VJ8 648 aa11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Xab2Q9DCD2 855 aaKnown RBP11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Rfwd2Q9R1A8 733 aaKnown RBP11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Nphp4P59240 1425 aa11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Pex1Q5BL07 1284 aa11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Vps33aQ9D2N9 598 aa11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Polr2dQ9D7M8 142 aaKnown RBP11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Hand2Q61039 217 aa11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Cyp7a1Q64505 503 aa11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Spata16Q8C636 571 aa11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Ier5O89113 308 aa11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Gnat2P50149 354 aa11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Ica1lQ3TY65 431 aa11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Nr1d1Q3UV55 615 aa11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Fgd5Q80UZ0 1219 aa11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Pdlim2Q8R1G6 349 aa11.88□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Calm1P0DP26 149 aaKnown RBP11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Calm2P0DP27 149 aaKnown RBP11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Calm3P0DP28 149 aaKnown RBP11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Actn2Q9JI91 894 aa11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Psma7Q9Z2U0 248 aa11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Clasp1Q80TV8 1535 aaKnown RBP11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 DymQ8CHY3 669 aa11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Stk11Q9WTK7 436 aa11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Rgs12Q8CGE9 1381 aa11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Flot1O08917 428 aa11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Rps6ka1P18653 724 aa11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Naa16Q9DBB4 864 aa11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Cage1Q5IR70 849 aa11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Ulbp1Q8HWA3 334 aa11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Smc6Q924W5 1097 aa11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 MefvQ9JJ26 767 aa11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Hcls1P49710 486 aaKnown RBP11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Pdrg1P59048 133 aa11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Bank1Q80VH0 783 aa11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Klc3Q91W40 508 aa11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Fam208aQ69ZR9 1610 aaKnown RBP11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Lmnb2P21619 596 aaKnown RBP11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 S100bP50114 92 aa11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 FerP70451 823 aa11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Psmd6Q99JI4 389 aa11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Plch2A2AP18 1501 aa11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Ces1aE9PYP1 563 aa11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Zbtb21E9Q444 1094 aa11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Cnga4Q3UW12 575 aa11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Slc38a10Q5I012 1090 aa11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 NntQ61941 1086 aaKnown RBP11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Trim68Q8K243 485 aa11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Zcchc8Q9CYA6 709 aaKnown RBP11.87□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Vamp4O70480 141 aa11.86□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Ccdc182Q9D9C6 152 aa11.86□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Mx2Q9WVP9 655 aa11.86□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Slc1a4O35874 532 aa11.86□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Dnajc25A2ALW5 357 aa11.86□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Speer2E9Q9U2 264 aa11.86□□□□□ -0.51
Nipbl-201ENSMUST00000052965 GnaqP21279 359 aa11.86□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Aplp1Q03157 653 aa11.86□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Skap1Q3UUV5 355 aa11.86□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Vil1Q62468 827 aa11.86□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Clec16aQ80U30 1036 aa11.86□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Jade3Q6IE82 823 aa11.86□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Wdr24Q8CFJ9 790 aa11.86□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Rtl9Q32KG4 1339 aa11.86□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Rabgap1A2AWA9 1064 aa11.86□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Serpini1O35684 410 aa11.86□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Paip2bQ91W45 136 aa11.86□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Map3k4O08648 1597 aa11.86□□□□□ -0.51
Nipbl-201ENSMUST00000052965 PrphP15331 475 aa11.86□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Kifap3P70188 793 aa11.86□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Tekt2Q922G7 430 aa11.86□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Desi2Q9D291 194 aa11.86□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Rpl13P47963 211 aaKnown RBP11.86□□□□□ -0.51
Nipbl-201ENSMUST00000052965 SlmapQ3URD3 845 aa11.86□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms