RNA–Protein interactions for RNA: ENSMUST00000032842.12

Ccdc90b-201, Transcript of Coiled-coil domain-containing protein 90B, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc90b, Length 1,596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc90b-201ENSMUST00000032842 Ptpn12P35831 775 aa17.22■□□□□ 0.35
Ccdc90b-201ENSMUST00000032842 Rfx1P48377 963 aa17.22■□□□□ 0.35
Ccdc90b-201ENSMUST00000032842 MyrflQ3UN70 904 aa17.22■□□□□ 0.35
Ccdc90b-201ENSMUST00000032842 Rc3h1Q4VGL6 1130 aaKnown RBP17.22■□□□□ 0.35
Ccdc90b-201ENSMUST00000032842 Cep55Q8BT07 462 aa17.22■□□□□ 0.35
Ccdc90b-201ENSMUST00000032842 Pms1Q8K119 917 aa17.22■□□□□ 0.35
Ccdc90b-201ENSMUST00000032842 Ppp1r11Q8K1L5 131 aa17.22■□□□□ 0.35
Ccdc90b-201ENSMUST00000032842 Nup133Q8R0G9 1155 aa17.22■□□□□ 0.35
Ccdc90b-201ENSMUST00000032842 Tjap1Q9DCD5 539 aa17.22■□□□□ 0.35
Ccdc90b-201ENSMUST00000032842 Myh14Q6URW6 2000 aa17.21■□□□□ 0.35
Ccdc90b-201ENSMUST00000032842 Usp53P15975 1069 aa17.21■□□□□ 0.35
Ccdc90b-201ENSMUST00000032842 LeprP48356 1162 aa17.21■□□□□ 0.35
Ccdc90b-201ENSMUST00000032842 Rasgrp4Q8BTM9 673 aa17.21■□□□□ 0.35
Ccdc90b-201ENSMUST00000032842 Cchcr1Q8K2I2 770 aa17.21■□□□□ 0.35
Ccdc90b-201ENSMUST00000032842 Pes1Q9EQ61 584 aaKnown RBP17.21■□□□□ 0.35
Ccdc90b-201ENSMUST00000032842 Cacna1fQ9JIS7 1985 aa17.21■□□□□ 0.35
Ccdc90b-201ENSMUST00000032842 1700006A11RikB9EHI3 544 aa17.2■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Vmn2r23E9PXI5 849 aa17.2■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Lgr6Q3UVD5 967 aa17.2■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Psen2Q61144 448 aa17.2■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Htatsf1Q8BGC0 757 aa17.2■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 QarsQ8BML9 775 aa17.2■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Txnrd2Q9JLT4 524 aa17.2■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Polr2aP08775 1970 aaKnown RBP17.2■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Zmym2Q9CU65 1376 aa17.2■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Smarce1O54941 411 aaKnown RBP17.19■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Tmem59lQ7TNI2 337 aa17.19■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Terb1Q8C0V1 768 aa17.19■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 9230110C19RikQ8CC70 267 aa17.19■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Mei1Q9D4I2 1268 aa17.19■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Atrnl1Q6A051 1378 aa17.19■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Terf2O35144 541 aa17.19■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Eya3P97480 510 aa17.19■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Sec23aQ01405 765 aa17.19■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 PcQ05920 1178 aa17.19■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Q3UJP5 209 aa17.19■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Tmprss11eQ5S248 423 aa17.19■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Cep131Q62036 1060 aa17.19■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Hps6Q8BLY7 805 aa17.19■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Gbp7Q91Z40 638 aa17.19■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 TicrrQ8BQ33 1889 aa17.19■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Col2a1P28481 1487 aa17.18■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Elmsan1E9Q2I4 1089 aaKnown RBP17.18■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Dnajc2P54103 621 aaKnown RBP17.18■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Scnn1aQ61180 699 aa17.18■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Dpp8Q80YA7 892 aa17.18■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 OplahQ8K010 1288 aa17.18■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Gpr108Q91WD0 569 aa17.18■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Ubxn2aQ99KJ0 258 aa17.18■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Scn10aQ6QIY3 1958 aa17.18■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Pcdh15Q99PJ1 1943 aa17.17■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Catsper2A2ARP9 588 aa17.17■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Syt1P46096 421 aa17.17■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Ncf1Q09014 390 aa17.17■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Usp50Q6P8X6 390 aa17.17■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Pus7lQ8CE46 702 aa17.17■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Tut1Q8R3F9 869 aa17.17■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Suclg2Q9Z2I8 433 aa17.17■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Filip1lQ6P6L0 1131 aa17.16■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Tekt3Q6X6Z7 490 aa17.16■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 BrapQ99MP8 591 aa17.16■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 WtapQ9ER69 396 aa17.16■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Clip2Q9Z0H8 1047 aa17.16■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 A0A1W2P6Q8 802 aa17.15■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Gm9048A0A1W2P7H4 802 aa17.15■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 A0A1W2P7Z8 802 aa17.15■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Gm9046A0A1W2P855 802 aa17.15■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Prr16A3KMN5 304 aa17.15■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Mtx1P47802 317 aa17.15■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Ctdnep1Q3TP92 244 aa17.15■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Ppp1r10Q80W00 888 aaKnown RBP17.15■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 DlatQ8BMF4 642 aa17.15■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Paf1Q8K2T8 535 aa17.15■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Igf2bp3Q9CPN8 579 aaKnown RBP17.15■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Dmrtc1Q9D9R7 182 aa17.15■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Myl3P09542 204 aa17.15■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Cct2P80314 535 aaKnown RBP17.15■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Brip1Q5SXJ3 1174 aa17.15■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 DymQ8CHY3 669 aa17.15■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Sirt2Q8VDQ8 389 aa17.15■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Akap8Q9DBR0 687 aaKnown RBP17.15■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Fam205a1D3YZF6 1314 aa17.15■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Rgs12Q8CGE9 1381 aa17.14■□□□□ 0.34
Ccdc90b-201ENSMUST00000032842 Cyp26a1O55127 497 aa17.14■□□□□ 0.33
Ccdc90b-201ENSMUST00000032842 Stat1P42225 749 aa17.14■□□□□ 0.33
Ccdc90b-201ENSMUST00000032842 Gm11437Q5QR91 290 aa17.14■□□□□ 0.33
Ccdc90b-201ENSMUST00000032842 Krt74Q6IFZ9 495 aa17.14■□□□□ 0.33
Ccdc90b-201ENSMUST00000032842 Tsr2Q8C8T8 191 aa17.14■□□□□ 0.33
Ccdc90b-201ENSMUST00000032842 Clstn1Q9EPL2 979 aa17.14■□□□□ 0.33
Ccdc90b-201ENSMUST00000032842 Fzd9Q9R216 592 aa17.14■□□□□ 0.33
Ccdc90b-201ENSMUST00000032842 B3galt4Q9Z0F0 371 aa17.14■□□□□ 0.33
Ccdc90b-201ENSMUST00000032842 Trpm7Q923J1 1863 aa17.14■□□□□ 0.33
Ccdc90b-201ENSMUST00000032842 Sema3fO88632 785 aa17.13■□□□□ 0.33
Ccdc90b-201ENSMUST00000032842 TbcaP48428 108 aaKnown RBP17.13■□□□□ 0.33
Ccdc90b-201ENSMUST00000032842 Adgre1Q61549 931 aa17.13■□□□□ 0.33
Ccdc90b-201ENSMUST00000032842 Mapk4Q6P5G0 583 aa17.13■□□□□ 0.33
Ccdc90b-201ENSMUST00000032842 Ube2oQ6ZPJ3 1288 aa17.13■□□□□ 0.33
Ccdc90b-201ENSMUST00000032842 Fsd1Q7TPM6 496 aa17.13■□□□□ 0.33
Ccdc90b-201ENSMUST00000032842 Cypt1Q8CH20 168 aa17.13■□□□□ 0.33
Ccdc90b-201ENSMUST00000032842 Lonrf3Q9D4H7 753 aa17.13■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 71.7 ms