RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Dynll1P63168 89 aa21.07■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Gga3Q8BMI3 718 aa21.07■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Desi2Q9D291 194 aa21.07■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Tbx2Q60707 711 aa21.06■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Slc27a1Q60714 646 aa21.06■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Ovgp1Q62010 721 aa21.06■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Nek9Q8K1R7 984 aa21.06■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Taf6lQ8R2K4 616 aa21.06■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Ndufb9Q9CQJ8 179 aa21.06■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 VmacQ8BP01 174 aa21.06■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Igsf9bE9PZ19 1328 aa21.06■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 A0A1Y7VML8 143 aa21.05■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 GabrdP22933 449 aa21.05■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Pde4dQ01063 747 aa21.05■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Sec23aQ01405 765 aa21.05■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Cnnm2Q3TWN3 875 aa21.05■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Abcf1Q6P542 837 aaKnown RBP21.05■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Necab1Q8BG18 352 aa21.05■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Q8K2W9 541 aa21.05■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Ubac1Q8VDI7 409 aa21.05■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Ccdc39Q9D5Y1 937 aa21.05■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Baiap2l1Q9DBJ3 514 aa21.05■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 H2afxP27661 143 aaKnown RBP21.05■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Ppp2r2cQ8BG02 447 aa21.05■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Mast2Q60592 1734 aa21.05■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Gm43738A0A0G2JEA5 862 aa21.04■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Dennd3A2RT67 1274 aa21.04■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Zhx1P70121 873 aa21.04■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Gjb4Q02738 266 aa21.04■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 PsdQ5DTT2 1024 aa21.04■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Paf1Q8K2T8 535 aa21.04■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Cep89Q9CZX2 791 aa21.04■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Acad12D3Z7X0 555 aa21.04■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Actn3O88990 900 aaKnown RBP21.04■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Olfm5Q8BU90 496 aa21.04■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Ampd3O08739 766 aa21.03■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Sdc2P43407 202 aa21.03■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Ifit1bl2Q3U687 466 aa21.03■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Cep85Q8BMK0 761 aa21.03■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Tab2Q99K90 693 aa21.03■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Ccdc121E9Q6D3 323 aa21.03■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Nmt2O70311 529 aa21.03■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Trim25Q61510 634 aaKnown RBP21.03■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Trim34aQ99PP6 485 aa21.03■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Iqca1Q9CUL5 857 aa21.03■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 AW822073A0A0N4SUK1 652 aa21.02■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Tc2nQ91XT6 489 aa21.02■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Tob2Q9JM55 345 aa21.02■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 ChmQ9QXG2 665 aa21.02■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Tbc1d8bA3KGB4 1114 aa21.02■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Fbxo3Q9DC63 480 aa21.02■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Myo3bQ1EG27 1305 aa21.02■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Ktn1Q61595 1327 aaKnown RBP21.02■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Cyp2j7A0A140T8U1 504 aa21.01■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Myl3P09542 204 aa21.01■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Specc1lQ2KN98 1118 aaKnown RBP21.01■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Ccdc102aQ3TMW1 549 aa21.01■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Exoc5Q3TPX4 708 aa21.01■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Q66JV7 365 aa21.01■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 RbsnQ80Y56 783 aa21.01■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Ulbp1Q8HWA3 334 aa21.01■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Scn11aQ9R053 1765 aa21.01■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Kndc1Q0KK55 1742 aa21.01■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 1700029H14RikE9PY36 240 aa21.01■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 SsbP32067 415 aaKnown RBP21.01■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Pnpla2Q8BJ56 486 aa21.01■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Fam53cQ8BXQ8 393 aa21.01■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Clstn1Q9EPL2 979 aa21.01■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Rcan1Q9JHG6 198 aa21.01■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Lgr5Q9Z1P4 907 aa21.01■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Nhsl1Q8CAF4 1587 aa21.01■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Epb41l2O70318 988 aaKnown RBP21.01■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 PparaP23204 468 aa21.01■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Uri1Q3TLD5 531 aa21.01■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Evc2Q8K1G2 1220 aa21.01■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Wasf1Q8R5H6 559 aa21.01■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 MlphQ91V27 590 aa21.01■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Serpinb6bO08804 377 aa21■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Ess2O70279 479 aa21■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Rbm15bQ6PHZ5 887 aaKnown RBP21■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Tbc1d5Q80XQ2 815 aa21■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Chaf1aQ9QWF0 911 aa21■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Rsph10bE9PYQ0 876 aa21■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Adssl1P28650 457 aa21■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Enox1Q8BHR2 643 aaKnown RBP21■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Lrrd1Q8C0R9 853 aa21■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Pus7lQ8CE46 702 aa21■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Znf638Q61464 1960 aaKnown RBP20.99■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Bag1Q60739 355 aa20.99■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Olfr118Q7TRJ6 321 aa20.99■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Q8CEZ4 452 aa20.99■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Pde5aQ8CG03 865 aa20.99■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Tada3Q8R0L9 432 aa20.99■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Krt23Q99PS0 422 aa20.99■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Eif5P59325 429 aaKnown RBP20.99■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Ric8aQ3TIR3 530 aa20.99■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Tmx1Q8VBT0 278 aa20.99■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Fam76aQ922G2 307 aa20.99■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Cyp3a25O09158 503 aa20.98■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Stat5bP42232 786 aa20.98■□□□□ 0.95
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms