RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Hspa4Q61316 841 aa18.49■□□□□ 0.55
Trim28-201ENSMUST00000005705 Fnbp4Q6ZQ03 1031 aa18.49■□□□□ 0.55
Trim28-201ENSMUST00000005705 Sept9Q80UG5 583 aa18.49■□□□□ 0.55
Trim28-201ENSMUST00000005705 Atp1a4Q9WV27 1032 aa18.49■□□□□ 0.55
Trim28-201ENSMUST00000005705 Crb1Q8VHS2 1405 aa18.49■□□□□ 0.55
Trim28-201ENSMUST00000005705 Phldb3E9QAF4 648 aa18.49■□□□□ 0.55
Trim28-201ENSMUST00000005705 Abcf1Q6P542 837 aaKnown RBP18.49■□□□□ 0.55
Trim28-201ENSMUST00000005705 AbraQ8BUZ1 375 aa18.49■□□□□ 0.55
Trim28-201ENSMUST00000005705 Apobec3Q99J72 440 aaKnown RBP18.49■□□□□ 0.55
Trim28-201ENSMUST00000005705 Krt84Q99M73 603 aa18.49■□□□□ 0.55
Trim28-201ENSMUST00000005705 NgdnQ9DB96 315 aaKnown RBP18.49■□□□□ 0.55
Trim28-201ENSMUST00000005705 Ccdc34Q3UI66 367 aa18.49■□□□□ 0.55
Trim28-201ENSMUST00000005705 Ctdp1Q7TSG2 960 aa18.49■□□□□ 0.55
Trim28-201ENSMUST00000005705 Susd4Q8BH32 490 aa18.49■□□□□ 0.55
Trim28-201ENSMUST00000005705 Tada3Q8R0L9 432 aa18.49■□□□□ 0.55
Trim28-201ENSMUST00000005705 Ankrd1Q9CR42 319 aa18.49■□□□□ 0.55
Trim28-201ENSMUST00000005705 Ccdc121E9Q6D3 323 aa18.48■□□□□ 0.55
Trim28-201ENSMUST00000005705 Slurp2P0DP59 97 aa18.48■□□□□ 0.55
Trim28-201ENSMUST00000005705 Smc1aQ9CU62 1233 aaKnown RBP18.48■□□□□ 0.55
Trim28-201ENSMUST00000005705 Psrc1Q9D0P7 329 aa18.48■□□□□ 0.55
Trim28-201ENSMUST00000005705 Rapgef4Q9EQZ6 1011 aa18.48■□□□□ 0.55
Trim28-201ENSMUST00000005705 WtapQ9ER69 396 aa18.48■□□□□ 0.55
Trim28-201ENSMUST00000005705 Specc1lQ2KN98 1118 aaKnown RBP18.48■□□□□ 0.55
Trim28-201ENSMUST00000005705 Rtn1Q8K0T0 780 aa18.48■□□□□ 0.55
Trim28-201ENSMUST00000005705 Mylk2Q8VCR8 613 aa18.48■□□□□ 0.55
Trim28-201ENSMUST00000005705 Cep89Q9CZX2 791 aa18.48■□□□□ 0.55
Trim28-201ENSMUST00000005705 Mapk8ip1Q9WVI9 707 aa18.48■□□□□ 0.55
Trim28-201ENSMUST00000005705 Mroh6V9GX81 722 aa18.48■□□□□ 0.55
Trim28-201ENSMUST00000005705 Akr1c19G3X9Y6 323 aa18.47■□□□□ 0.55
Trim28-201ENSMUST00000005705 Kiaa1211Q5PR69 1207 aa18.47■□□□□ 0.55
Trim28-201ENSMUST00000005705 Cyp24a1Q64441 514 aa18.47■□□□□ 0.55
Trim28-201ENSMUST00000005705 Secisbp2lQ6A098 1086 aaKnown RBP18.47■□□□□ 0.55
Trim28-201ENSMUST00000005705 Prc1Q99K43 603 aaKnown RBP18.47■□□□□ 0.55
Trim28-201ENSMUST00000005705 Tktl2Q9D4D4 627 aa18.47■□□□□ 0.55
Trim28-201ENSMUST00000005705 EmbP21995 330 aa18.47■□□□□ 0.55
Trim28-201ENSMUST00000005705 Csrnp2Q8BGQ2 534 aa18.47■□□□□ 0.55
Trim28-201ENSMUST00000005705 Trip6Q9Z1Y4 480 aa18.47■□□□□ 0.55
Trim28-201ENSMUST00000005705 Mast3Q3U214 1321 aa18.47■□□□□ 0.55
Trim28-201ENSMUST00000005705 Cyp4x1Q6A152 507 aa18.46■□□□□ 0.55
Trim28-201ENSMUST00000005705 Trim34aQ99PP6 485 aa18.46■□□□□ 0.55
Trim28-201ENSMUST00000005705 Telo2Q9DC40 840 aaKnown RBP18.46■□□□□ 0.55
Trim28-201ENSMUST00000005705 Hic2Q9JLZ6 619 aaKnown RBP18.46■□□□□ 0.55
Trim28-201ENSMUST00000005705 Znf496Q5SXI5 585 aa18.46■□□□□ 0.55
Trim28-201ENSMUST00000005705 Rai14Q9EP71 979 aaKnown RBP18.46■□□□□ 0.55
Trim28-201ENSMUST00000005705 DonsonQ9QXP4 560 aa18.46■□□□□ 0.55
Trim28-201ENSMUST00000005705 Pdcd6ipQ9WU78 869 aaKnown RBP18.46■□□□□ 0.55
Trim28-201ENSMUST00000005705 Pla2g4bP0C871 782 aa18.45■□□□□ 0.54
Trim28-201ENSMUST00000005705 Krt82Q99M74 516 aa18.45■□□□□ 0.54
Trim28-201ENSMUST00000005705 PdclQ9DBX2 301 aa18.45■□□□□ 0.54
Trim28-201ENSMUST00000005705 EcsitQ9QZH6 435 aa18.45■□□□□ 0.54
Trim28-201ENSMUST00000005705 Bcl9lQ67FY2 1494 aa18.45■□□□□ 0.54
Trim28-201ENSMUST00000005705 A0A1L1SQF0 893 aa18.45■□□□□ 0.54
Trim28-201ENSMUST00000005705 Cyp3a59D3Z2W7 503 aa18.45■□□□□ 0.54
Trim28-201ENSMUST00000005705 Evi5P97366 809 aa18.45■□□□□ 0.54
Trim28-201ENSMUST00000005705 Ccdc47Q9D024 483 aaKnown RBP18.45■□□□□ 0.54
Trim28-201ENSMUST00000005705 MicalclQ9D5U9 680 aa18.45■□□□□ 0.54
Trim28-201ENSMUST00000005705 Ugt1a8D3Z748 530 aa18.45■□□□□ 0.54
Trim28-201ENSMUST00000005705 Ugt1a10E9PXN7 530 aa18.45■□□□□ 0.54
Trim28-201ENSMUST00000005705 Gm21969J3QJZ1 289 aa18.45■□□□□ 0.54
Trim28-201ENSMUST00000005705 Sept1P42209 366 aa18.45■□□□□ 0.54
Trim28-201ENSMUST00000005705 LtbrP50284 415 aa18.45■□□□□ 0.54
Trim28-201ENSMUST00000005705 Spata5Q3UMC0 893 aaKnown RBP18.45■□□□□ 0.54
Trim28-201ENSMUST00000005705 Fam193aQ8CGI1 1231 aaKnown RBP18.45■□□□□ 0.54
Trim28-201ENSMUST00000005705 Brd3Q8K2F0 726 aaKnown RBP18.45■□□□□ 0.54
Trim28-201ENSMUST00000005705 Klhl10Q9D5V2 608 aa18.45■□□□□ 0.54
Trim28-201ENSMUST00000005705 Pde3aQ9Z0X4 1141 aa18.45■□□□□ 0.54
Trim28-201ENSMUST00000005705 Ric1Q69ZJ7 1422 aa18.44■□□□□ 0.54
Trim28-201ENSMUST00000005705 Ccng2O08918 344 aa18.44■□□□□ 0.54
Trim28-201ENSMUST00000005705 Luc7l2Q7TNC4 392 aaKnown RBP18.44■□□□□ 0.54
Trim28-201ENSMUST00000005705 Jmjd4Q8BFT6 427 aa18.44■□□□□ 0.54
Trim28-201ENSMUST00000005705 Triml1Q8BVP1 470 aa18.44■□□□□ 0.54
Trim28-201ENSMUST00000005705 Slc51aQ8R000 340 aa18.44■□□□□ 0.54
Trim28-201ENSMUST00000005705 Rgs22G3UYX5 1258 aa18.44■□□□□ 0.54
Trim28-201ENSMUST00000005705 Fbxl16A2RT62 479 aa18.44■□□□□ 0.54
Trim28-201ENSMUST00000005705 Exoc5Q3TPX4 708 aa18.44■□□□□ 0.54
Trim28-201ENSMUST00000005705 Ccdc174Q3U155 467 aa18.44■□□□□ 0.54
Trim28-201ENSMUST00000005705 Ccdc57Q6PHN1 1016 aa18.44■□□□□ 0.54
Trim28-201ENSMUST00000005705 Ube3cQ80U95 1083 aa18.44■□□□□ 0.54
Trim28-201ENSMUST00000005705 Cyp4f39Q8BGU0 532 aa18.44■□□□□ 0.54
Trim28-201ENSMUST00000005705 2310002L09RikQ9D7L5 217 aa18.44■□□□□ 0.54
Trim28-201ENSMUST00000005705 Bnip3O55003 187 aa18.43■□□□□ 0.54
Trim28-201ENSMUST00000005705 Atp8a2P98200 1148 aa18.43■□□□□ 0.54
Trim28-201ENSMUST00000005705 Arglu1Q3UL36 271 aaKnown RBP18.43■□□□□ 0.54
Trim28-201ENSMUST00000005705 Mctp2Q5RJH2 878 aa18.43■□□□□ 0.54
Trim28-201ENSMUST00000005705 Zranb2Q9R020 330 aaKnown RBP18.43■□□□□ 0.54
Trim28-201ENSMUST00000005705 Prr5lA2AVJ5 370 aa18.43■□□□□ 0.54
Trim28-201ENSMUST00000005705 Zscan20B2KFW1 1030 aa18.43■□□□□ 0.54
Trim28-201ENSMUST00000005705 Otud7bB2RUR8 840 aa18.43■□□□□ 0.54
Trim28-201ENSMUST00000005705 Map9Q3TRR0 646 aa18.43■□□□□ 0.54
Trim28-201ENSMUST00000005705 Rasgrp4Q8BTM9 673 aa18.43■□□□□ 0.54
Trim28-201ENSMUST00000005705 Mrc1Q61830 1456 aa18.43■□□□□ 0.54
Trim28-201ENSMUST00000005705 Dhx8A2A4P0 1244 aaKnown RBP18.42■□□□□ 0.54
Trim28-201ENSMUST00000005705 MybP06876 636 aa18.42■□□□□ 0.54
Trim28-201ENSMUST00000005705 Znhit6Q3UFB2 460 aaKnown RBP18.42■□□□□ 0.54
Trim28-201ENSMUST00000005705 Sik1Q60670 779 aa18.42■□□□□ 0.54
Trim28-201ENSMUST00000005705 Cfap69Q8BH53 942 aa18.42■□□□□ 0.54
Trim28-201ENSMUST00000005705 Cd209bQ8CJ91 325 aa18.42■□□□□ 0.54
Trim28-201ENSMUST00000005705 Trim11Q99PQ2 467 aa18.42■□□□□ 0.54
Trim28-201ENSMUST00000005705 Sycp2lA0A0M3U1B0 842 aa18.42■□□□□ 0.54
Trim28-201ENSMUST00000005705 Prl3d1P18121 224 aa18.42■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms