RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Ankk1Q8BZ25 745 aa14.38□□□□□ -0.11
Clcn3-201ENSMUST00000004430 CpvlQ9D3S9 478 aa14.38□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Sept14Q9DA97 430 aa14.38□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Spocd1B1ASB6 936 aa14.37□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Dnajc21E9Q8D0 531 aa14.37□□□□□ -0.11
Clcn3-201ENSMUST00000004430 CebpaP53566 359 aa14.37□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Ifit1bl2Q3U687 466 aa14.37□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Krit1Q6S5J6 736 aa14.37□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Q8CEZ4 452 aa14.37□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Cbx6Q9DBY5 414 aa14.37□□□□□ -0.11
Clcn3-201ENSMUST00000004430 ParvgQ9ERD8 331 aa14.37□□□□□ -0.11
Clcn3-201ENSMUST00000004430 AatfQ9JKX4 526 aaKnown RBP14.37□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Ahnak2E9PYB0 1738 aaKnown RBP14.37□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Scn7aB1AYL1 1681 aa14.37□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Usp42B2RQC2 1324 aaKnown RBP14.37□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Trpm3Q5F4S9 1721 aa14.37□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Proca1B0QZF7 307 aa14.37□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Arhgef2Q60875 985 aa14.37□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Ublcp1Q8BGR9 318 aa14.37□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Hgh1Q8C3I8 393 aa14.37□□□□□ -0.11
Clcn3-201ENSMUST00000004430 TnrQ8BYI9 1358 aa14.37□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Tbc1d2B1AVH7 922 aa14.37□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Cnnm2Q3TWN3 875 aa14.37□□□□□ -0.11
Clcn3-201ENSMUST00000004430 NfkbibQ60778 359 aa14.37□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Ube3aO08759 870 aa14.37□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Cops6O88545 324 aa14.37□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Lrrc6O88978 473 aa14.37□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Rad23aP54726 363 aa14.37□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Nlrp2Q4PLS0 1046 aaKnown RBP14.37□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Ccdc172Q810N9 267 aa14.37□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Mb21d2Q8C525 428 aa14.37□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Tsnaxip1Q99P25 704 aa14.37□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Gm10378F6XQQ1 160 aa14.36□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Capn2O08529 700 aa14.36□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Hmx1O70218 332 aa14.36□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Eif3j1Q3UGC7 261 aaKnown RBP14.36□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Eif3j2Q66JS6 263 aa14.36□□□□□ -0.11
Clcn3-201ENSMUST00000004430 RbsnQ80Y56 783 aa14.36□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Kiaa1524Q8BWY9 907 aa14.36□□□□□ -0.11
Clcn3-201ENSMUST00000004430 TxlnbQ8VBT1 685 aa14.36□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Pcdha7Q91Y13 937 aa14.36□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Dnajc14Q921R4 703 aa14.36□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Anks1aP59672 1150 aa14.36□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Ankrd13cQ3UX43 541 aa14.36□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Mcm7Q61881 719 aaKnown RBP14.36□□□□□ -0.11
Clcn3-201ENSMUST00000004430 TxlnaQ6PAM1 554 aaKnown RBP14.36□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Ubxn10Q8BG34 277 aa14.36□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Tcof1O08784 1320 aaKnown RBP14.36□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Adcy9P51830 1353 aa14.36□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Prr16A3KMN5 304 aa14.36□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Vmn2r23E9PXI5 849 aa14.36□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Rgs22G3UYX5 1258 aa14.36□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Cdk4P30285 303 aa14.36□□□□□ -0.11
Clcn3-201ENSMUST00000004430 PtprvP70289 1705 aa14.35□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Gm28510A0A087WP28 240 aa14.35□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Zfp853A0A1D5RM95 733 aa14.35□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Prl3d2F6R3P9 224 aa14.35□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Speer4aF8VPX6 267 aa14.35□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Art2aP17981 287 aa14.35□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Ftl2P49945 183 aa14.35□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Kcna6Q61923 529 aa14.35□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Erlin2Q8BFZ9 340 aa14.35□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Tsen34Q8BMZ5 316 aa14.35□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Apol10aQ8CCA5 318 aa14.35□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Ubxn1Q922Y1 297 aa14.35□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Smco2Q9DA21 347 aa14.35□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Suclg2Q9Z2I8 433 aa14.35□□□□□ -0.11
Clcn3-201ENSMUST00000004430 CtifQ6PEE2 600 aaKnown RBP14.35□□□□□ -0.11
Clcn3-201ENSMUST00000004430 BbxQ8VBW5 907 aa14.35□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Ndufab1Q9CR21 156 aa14.35□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Mipol1Q9D9F8 279 aa14.35□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Arfgef2A2A5R2 1792 aa14.35□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Lrrcc1Q69ZB0 1026 aa14.35□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Lrrd1Q8C0R9 853 aa14.35□□□□□ -0.11
Clcn3-201ENSMUST00000004430 ZgpatQ8VDM1 511 aa14.35□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Rbm43Q99J64 343 aa14.35□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Bcl9Q9D219 1425 aa14.35□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Bicdl2Q8CHW5 507 aa14.34□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Efcc1Q9JJF6 558 aa14.34□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Gm28919A0A087WP35 240 aa14.34□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Nlrp1aQ2LKU9 1182 aa14.34□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Lrrfip1Q3UZ39 729 aaKnown RBP14.34□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Inpp5bQ8K337 993 aa14.34□□□□□ -0.11
Clcn3-201ENSMUST00000004430 RarsQ9D0I9 660 aaKnown RBP14.34□□□□□ -0.11
Clcn3-201ENSMUST00000004430 PsdQ5DTT2 1024 aa14.34□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Madcam1Q61826 405 aa14.34□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Csrnp2Q8BGQ2 534 aa14.34□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Capn12Q9ER56 720 aa14.34□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Surf1P09925 306 aa14.34□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Cep128Q8BI22 1102 aa14.34□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Tmem119Q8R138 280 aa14.34□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Cdca7Q9D0M2 382 aa14.34□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Ercc4Q9QZD4 917 aa14.34□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Nup153E9Q3G8 1462 aaKnown RBP14.33□□□□□ -0.11
Clcn3-201ENSMUST00000004430 DgkiD3YWQ0 1071 aa14.33□□□□□ -0.12
Clcn3-201ENSMUST00000004430 ByslO54825 436 aaKnown RBP14.33□□□□□ -0.12
Clcn3-201ENSMUST00000004430 IntuQ059U7 942 aa14.33□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Ppp1r7Q3UM45 361 aa14.33□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Gbp4Q61107 620 aa14.33□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Tekt3Q6X6Z7 490 aa14.33□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 60.1 ms