RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Pde5aQ8CG03 865 aa21.43■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Fam76aQ922G2 307 aa21.43■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Efcc1Q9JJF6 558 aa21.43■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Bag1Q60739 355 aa21.42■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Znf532Q6NXK2 1036 aa21.42■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Slf2Q6P9P0 1278 aa21.42■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Ttc12Q8BW49 704 aa21.42■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Tmem143Q8VD26 458 aa21.42■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Cep89Q9CZX2 791 aa21.42■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Samd1D3YXK1 519 aa21.41■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Tnni2P13412 182 aa21.41■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Sdc2P43407 202 aa21.41■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Trak2Q6P9N8 913 aa21.41■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Tfcp2Q9ERA0 502 aa21.41■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Mns1Q61884 491 aa21.41■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Cyp4x1Q6A152 507 aa21.41■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Vps53Q8CCB4 832 aa21.41■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Tc2nQ91XT6 489 aa21.41■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Bap1Q99PU7 728 aa21.41■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Mast2Q60592 1734 aa21.41■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Zscan20B2KFW1 1030 aa21.4■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Dctn1O08788 1281 aa21.4■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Adssl1P28650 457 aa21.4■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Siah1aP61092 282 aa21.4■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Cyp24a1Q64441 514 aa21.4■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Nek9Q8K1R7 984 aa21.4■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 HdlbpQ8VDJ3 1268 aaKnown RBP21.4■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Pik3ap1Q9EQ32 811 aa21.4■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Nup98Q6PFD9 1816 aaKnown RBP21.4■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Tpm3-rs7D3Z2H9 248 aa21.4■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Uri1Q3TLD5 531 aa21.4■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Znf496Q5SXI5 585 aa21.4■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Tada3Q8R0L9 432 aa21.4■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Vps16Q920Q4 839 aa21.4■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Ttc14Q9CSP9 761 aa21.4■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Iqca1Q9CUL5 857 aa21.4■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Myh13B1AR69 1938 aa21.4■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Cyp3a25O09158 503 aa21.39■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 PparaP23204 468 aa21.39■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 PcQ05920 1178 aa21.39■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Anks1bQ8BIZ1 1259 aa21.39■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 PnnO35691 725 aaKnown RBP21.39■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Kiaa1468Q148V7 1216 aa21.39■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Otop3Q80UF9 577 aa21.39■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Clic6Q8BHB9 596 aa21.39■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 GdaQ9R111 454 aa21.39■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Snapc4Q8BP86 1333 aa21.39■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Phldb3E9QAF4 648 aa21.38■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Ccdc191J3QQ27 883 aa21.38■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Olfr118Q7TRJ6 321 aa21.38■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Spata32Q8C5V0 334 aa21.38■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Pnpla2Q8BJ56 486 aa21.38■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Slc39a11Q8BWY7 342 aa21.38■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Lrrd1Q8C0R9 853 aa21.38■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Cd209bQ8CJ91 325 aa21.38■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Gabpb2P81069 414 aa21.37■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Exoc5Q3TPX4 708 aa21.37■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Ppp2r5bQ6PD28 497 aa21.37■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Myh15E9Q264 1925 aa21.37■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 A0A1L1SQF0 893 aa21.37■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Serpinb6bO08804 377 aa21.37■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Ifit1bl2Q3U687 466 aa21.37■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Eif4enif1Q9EST3 983 aaKnown RBP21.37■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Tob2Q9JM55 345 aa21.37■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Plch1Q4KWH5 1682 aa21.36■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Ecm29Q6PDI5 1840 aa21.36■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 1700029H14RikE9PY36 240 aa21.36■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Kif2aP28740 705 aa21.36■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Ginm1Q91WR6 327 aa21.36■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Bnip3O55003 187 aa21.36■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Slc7a3P70423 618 aa21.36■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Gtf2f1Q3THK3 508 aaKnown RBP21.36■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Spata5Q3UMC0 893 aaKnown RBP21.36■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Cep128Q8BI22 1102 aa21.36■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Nhsl1Q8CAF4 1587 aa21.35■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Prl7d1P04769 244 aa21.35■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Wnt7aP24383 349 aa21.35■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Gng11P61953 73 aa21.35■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 C87499Q3UX49 493 aa21.35■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Ift88Q61371 824 aa21.35■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 HelbQ6NVF4 1074 aa21.35■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Kif1bpQ6ZPU9 617 aa21.35■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Zranb2Q9R020 330 aaKnown RBP21.35■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Igsf9bE9PZ19 1328 aa21.35■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 CluhQ5SW19 1315 aa21.35■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Cul4bA2A432 970 aaKnown RBP21.34■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Cyp2c23E9Q5K4 494 aa21.34■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Il7P10168 154 aa21.34■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Stat5bP42232 786 aa21.34■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Plekha7Q3UIL6 1118 aaKnown RBP21.34■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Ankrd40Q5SUE8 363 aa21.34■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Nab2Q61127 525 aa21.34■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Cep85Q8BMK0 761 aa21.34■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Maats1Q8BRC6 783 aa21.34■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Ubac1Q8VDI7 409 aa21.34■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Prpf3Q922U1 683 aaKnown RBP21.34■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Myh4Q5SX39 1939 aa21.34■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Kat6bQ8BRB7 1872 aa21.34■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Gm43738A0A0G2JEA5 862 aa21.34■■□□□ 1.01
Shkbp1-201ENSMUST00000003857 Kmt5bQ3U8K7 883 aa21.34■■□□□ 1.01
Retrieved 100 of 22,080 RNA–protein pairs in 11.9 ms