RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Gm29094F6Q785 221 aa10.15□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 HdxQ14B70 692 aa10.15□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 MmeQ61391 750 aa10.15□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Jade3Q6IE82 823 aa10.15□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Anapc5Q8BTZ4 740 aa10.15□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Riox2Q8CD15 465 aa10.15□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Myl6bQ8CI43 207 aa10.15□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Plcd3Q8K2J0 785 aa10.15□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 AdpgkQ8VDL4 496 aa10.15□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Pola1P33609 1465 aa10.15□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Camsap1A2AHC3 1581 aa10.15□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Frmpd1A2AKB4 1549 aa10.15□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Dnajc8Q6NZB0 253 aaKnown RBP10.15□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Cnot10Q8BH15 744 aa10.15□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Rapgef5Q8C0Q9 814 aa10.15□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Azi2Q9QYP6 405 aa10.15□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Wdr17E9Q271 1322 aa10.15□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Pcf11G3X9Z4 1553 aa10.15□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Prdm11A2AGX3 565 aa10.15□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Exoc3l2D3YUP5 789 aa10.15□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Akr1c19G3X9Y6 323 aa10.15□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Jdp2P97875 163 aa10.15□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Micall2Q3TN34 1009 aa10.15□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 C130026I21RikQ8C898 291 aa10.15□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Parp10Q8CIE4 960 aa10.15□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Apol7bB1AQP7 369 aa10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Dnm2P39054 870 aaKnown RBP10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Ddb1Q3U1J4 1140 aaKnown RBP10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Ddx49Q4FZF3 480 aaKnown RBP10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Spata2Q8K004 515 aa10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Cdca7Q9D0M2 382 aa10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Atp7aQ64430 1491 aa10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Cnksr1A2A9K7 700 aa10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Ttll7A4Q9F0 912 aa10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 CltaO08585 235 aa10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Kifc2O08672 792 aa10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Cops6O88545 324 aa10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Gadd45bP22339 160 aa10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Ptcd1Q8C2E4 695 aaKnown RBP10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Bzw2Q91VK1 419 aaKnown RBP10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Lztfl1Q9JHQ5 299 aa10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Gm30191A0A0U1RNT7 187 aa10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Esr2O08537 530 aa10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Slc12a2P55012 1205 aa10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Hace1Q3U0D9 909 aa10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Pla2g4fQ50L41 855 aa10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Nacc1Q7TSZ8 514 aa10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Cyp26b1Q811W2 512 aa10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 SdsQ8VBT2 327 aa10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Tex19.1Q99MV2 351 aa10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Kdm5bQ80Y84 1544 aa10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Kcnk16G5E845 292 aa10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Tuft1O08970 390 aa10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 CaluO35887 315 aa10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Ccdc125Q5U465 500 aa10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Herc4Q6PAV2 1057 aa10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Tekt2Q922G7 430 aa10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Tnfrsf10bQ9QZM4 381 aa10.14□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Ankrd6Q69ZU8 712 aa10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Arhgap10Q6Y5D8 786 aa10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 9230110C19RikQ8CC70 267 aa10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Krt222Q8CCX5 294 aa10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Q8R1Y2 203 aa10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Trim7Q923T7 510 aa10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 FanccP50652 591 aa10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Fhdc1Q3ULZ2 1149 aa10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Cacna2d2Q6PHS9 1154 aa10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Rbm17Q8JZX4 405 aaKnown RBP10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Kiaa1024Q8K3V7 917 aa10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 LpxnQ99N69 386 aa10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Tsnaxip1Q99P25 704 aa10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Myo1aO88329 1043 aa10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Iqsec3Q3TES0 1195 aa10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Spc25Q3UA16 226 aa10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Drc1Q3USS3 753 aa10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Myo6Q64331 1265 aa10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Slc51bQ80WK2 128 aa10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Liat1Q810M6 228 aa10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Dars2Q8BIP0 653 aa10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Etf1Q8BWY3 437 aaKnown RBP10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Hgh1Q8C3I8 393 aa10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 SyncQ9EPM5 470 aa10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Kcng1A2BDX4 514 aa10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Rad51bO35719 350 aa10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Stk10O55098 966 aa10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 U2af2P26369 475 aaKnown RBP10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Hspa8P63017 646 aaKnown RBP10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Ppp1r12cQ3UMT1 782 aa10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Gzf1Q4VBD9 706 aa10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Krt12Q64291 487 aa10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Zcchc8Q9CYA6 709 aaKnown RBP10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Polr2dQ9D7M8 142 aaKnown RBP10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Eid1Q9DCR4 169 aa10.13□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Samd15F6XZJ7 620 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 GabpaQ00422 454 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Gpbp1Q6NXH3 473 aaKnown RBP10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Cabs1Q8C633 391 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Polr2bQ8CFI7 1174 aaKnown RBP10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Grin2aP35436 1464 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Kcnb2A6H8H5 907 aa10.12□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms