RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-238ENST00000641523 TP53AIP1Q9HCN2 124 aa2.84□□□□□ -1.95
CASC19-238ENST00000641523 INE1O15225 51 aa2.83□□□□□ -1.96
CASC19-238ENST00000641523 ACYP1P07311 99 aa2.83□□□□□ -1.96
CASC19-238ENST00000641523 S4R3F8 94 aa2.82□□□□□ -1.96
CASC19-238ENST00000641523 LINC00208Q96KT6 92 aa2.8□□□□□ -1.96
CASC19-238ENST00000641523 LCE3AQ5TA76 89 aa2.79□□□□□ -1.96
CASC19-238ENST00000641523 KRTAP6-3Q3LI67 103 aa2.77□□□□□ -1.97
CASC19-238ENST00000641523 ATP5EP2Q5VTU8 51 aa2.75□□□□□ -1.97
CASC19-238ENST00000641523 PRR15LQ9BU68 103 aa2.75□□□□□ -1.97
CASC19-238ENST00000641523 SPRR2GQ9BYE4 73 aa2.75□□□□□ -1.97
CASC19-238ENST00000641523 SNURFQ9Y675 71 aa2.75□□□□□ -1.97
CASC19-238ENST00000641523 LINC01558Q9Y6Z2 57 aa2.75□□□□□ -1.97
CASC19-238ENST00000641523 CRIPTQ9P021 101 aa2.74□□□□□ -1.97
CASC19-238ENST00000641523 NEBP20929 6669 aa2.74□□□□□ -1.97
CASC19-238ENST00000641523 KRTAP19-8Q3LI54 63 aa2.73□□□□□ -1.97
CASC19-238ENST00000641523 MT1BP07438 61 aa2.7□□□□□ -1.98
CASC19-238ENST00000641523 A0A087WVE0 104 aa2.69□□□□□ -1.98
CASC19-238ENST00000641523 H0Y9P7 68 aa2.69□□□□□ -1.98
CASC19-238ENST00000641523 H0YAA0 97 aa2.69□□□□□ -1.98
CASC19-238ENST00000641523 UQCR11O14957 56 aa2.69□□□□□ -1.98
CASC19-238ENST00000641523 PP632Q6XCG6 107 aa2.69□□□□□ -1.98
CASC19-238ENST00000641523 MUC12Q9UKN1 5478 aa2.68□□□□□ -1.98
CASC19-238ENST00000641523 KRTAP13-4Q3LI77 160 aa2.67□□□□□ -1.98
CASC19-238ENST00000641523 KMT2DO14686 5537 aa2.65□□□□□ -1.99
CASC19-238ENST00000641523 MDN1Q9NU22 5596 aa2.63□□□□□ -1.99
CASC19-238ENST00000641523 ACYP2P14621 99 aa2.62□□□□□ -1.99
CASC19-238ENST00000641523 PLAC4Q8WY50 150 aa2.61□□□□□ -1.99
CASC19-238ENST00000641523 KRTAP20-1Q3LI63 56 aa2.58□□□□□ -2
CASC19-238ENST00000641523 KRTAP5-5Q701N2 237 aaPredicted RBP2.57□□□□□ -2
CASC19-238ENST00000641523 M0QZ58 72 aa2.56□□□□□ -2
CASC19-238ENST00000641523 SPATA8Q6RVD6 105 aa2.54□□□□□ -2
CASC19-238ENST00000641523 MT1XP80297 61 aa2.53□□□□□ -2
CASC19-238ENST00000641523 SPRR2FQ96RM1 72 aa2.53□□□□□ -2.01
CASC19-238ENST00000641523 KRTAP8-1Q8IUC2 63 aa2.52□□□□□ -2.01
CASC19-238ENST00000641523 KRTAP2-3P0C7H8 128 aa2.51□□□□□ -2.01
CASC19-238ENST00000641523 KRTAP2-4Q9BYR9 128 aa2.51□□□□□ -2.01
CASC19-238ENST00000641523 KRTAP12-1P59990 96 aa2.5□□□□□ -2.01
CASC19-238ENST00000641523 SPRR2EP22531 72 aa2.49□□□□□ -2.01
CASC19-238ENST00000641523 SPRR2BP35325 72 aa2.49□□□□□ -2.01
CASC19-238ENST00000641523 SPRR2AP35326 72 aa2.49□□□□□ -2.01
CASC19-238ENST00000641523 KRTAP2-1Q9BYU5 128 aa2.43□□□□□ -2.02
CASC19-238ENST00000641523 SPRR2DP22532 72 aa2.42□□□□□ -2.02
CASC19-238ENST00000641523 A0A1B0GU69 56 aa2.41□□□□□ -2.02
CASC19-238ENST00000641523 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
CASC19-238ENST00000641523 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
CASC19-238ENST00000641523 DSTQ03001 7570 aaKnown RBP2.31□□□□□ -2.04
CASC19-238ENST00000641523 KRTAP12-3P60328 96 aa2.31□□□□□ -2.04
CASC19-238ENST00000641523 A0A0D9SG42 100 aa2.29□□□□□ -2.04
CASC19-238ENST00000641523 GPR98Q8WXG9 6306 aa2.28□□□□□ -2.04
CASC19-238ENST00000641523 KRTAP19-3Q7Z4W3 81 aa2.27□□□□□ -2.05
CASC19-238ENST00000641523 MT1EP04732 61 aa2.26□□□□□ -2.05
CASC19-238ENST00000641523 KRTAP19-7Q3SYF9 63 aa2.26□□□□□ -2.05
CASC19-238ENST00000641523 MT1GP13640 62 aa2.23□□□□□ -2.05
CASC19-238ENST00000641523 KRTAP12-4P60329 112 aa2.21□□□□□ -2.06
CASC19-238ENST00000641523 TNP1P09430 55 aa2.19□□□□□ -2.06
CASC19-238ENST00000641523 KRTAP19-5Q3LI72 72 aa2.19□□□□□ -2.06
CASC19-238ENST00000641523 MT1MQ8N339 61 aa2.15□□□□□ -2.06
CASC19-238ENST00000641523 C10orf95Q9H7T3 257 aa2.15□□□□□ -2.06
CASC19-238ENST00000641523 MT1LQ93083 61 aa2.15□□□□□ -2.07
CASC19-238ENST00000641523 AHNAK2Q8IVF2 5795 aa2.12□□□□□ -2.07
CASC19-238ENST00000641523 MT4P47944 62 aa2.1□□□□□ -2.07
CASC19-238ENST00000641523 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
CASC19-238ENST00000641523 KRTAP5-10Q6L8G5 202 aa1.99□□□□□ -2.09
CASC19-238ENST00000641523 KRTAP20-2Q3LI61 65 aa1.97□□□□□ -2.09
CASC19-238ENST00000641523 SYNE1Q8NF91 8797 aaKnown RBP1.91□□□□□ -2.1
CASC19-238ENST00000641523 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
CASC19-238ENST00000641523 MT1AP04731 61 aa1.85□□□□□ -2.11
CASC19-238ENST00000641523 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
CASC19-238ENST00000641523 KRTAP6-1Q3LI64 71 aa1.8□□□□□ -2.12
CASC19-238ENST00000641523 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
CASC19-238ENST00000641523 MUC5ACP98088 5654 aa1.78□□□□□ -2.13
CASC19-238ENST00000641523 KRTAP6-2Q3LI66 62 aa1.74□□□□□ -2.13
CASC19-238ENST00000641523 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
CASC19-238ENST00000641523 PRM1P04553 51 aa1.19□□□□□ -2.22
CASC19-238ENST00000641523 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
CASC19-238ENST00000641523 KRTAP21-1Q3LI58 79 aa1□□□□□ -2.25
CASC19-238ENST00000641523 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 12.8 ms