RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 PRO2289Q9P1D8 64 aa3.65□□□□□ -1.83
PHGDH-219ENST00000641513 KRTAP10-5P60370 271 aa3.64□□□□□ -1.83
PHGDH-219ENST00000641513 MT1XP80297 61 aa3.64□□□□□ -1.83
PHGDH-219ENST00000641513 NDUFAF8A1L188 74 aa3.59□□□□□ -1.83
PHGDH-219ENST00000641513 KRTAP20-1Q3LI63 56 aa3.57□□□□□ -1.84
PHGDH-219ENST00000641513 GPR98Q8WXG9 6306 aa3.57□□□□□ -1.84
PHGDH-219ENST00000641513 SPRR5A0A1B0GTR4 108 aa3.55□□□□□ -1.84
PHGDH-219ENST00000641513 LUZP6Q538Z0 58 aa3.52□□□□□ -1.85
PHGDH-219ENST00000641513 KRTAP10-7P60409 375 aaPredicted RBP3.51□□□□□ -1.85
PHGDH-219ENST00000641513 MUC12Q9UKN1 5478 aa3.51□□□□□ -1.85
PHGDH-219ENST00000641513 KRTAP10-12P60413 245 aa3.5□□□□□ -1.85
PHGDH-219ENST00000641513 KRTAP19-6Q3LI70 58 aa3.5□□□□□ -1.85
PHGDH-219ENST00000641513 LCE3AQ5TA76 89 aa3.49□□□□□ -1.85
PHGDH-219ENST00000641513 KRTAP8-1Q8IUC2 63 aa3.49□□□□□ -1.85
PHGDH-219ENST00000641513 KRTAP6-3Q3LI67 103 aa3.48□□□□□ -1.85
PHGDH-219ENST00000641513 KMT2DO14686 5537 aa3.45□□□□□ -1.86
PHGDH-219ENST00000641513 MDN1Q9NU22 5596 aa3.34□□□□□ -1.87
PHGDH-219ENST00000641513 KRTAP12-3P60328 96 aa3.34□□□□□ -1.87
PHGDH-219ENST00000641513 KRTAP19-5Q3LI72 72 aa3.32□□□□□ -1.88
PHGDH-219ENST00000641513 A0A0A0MQY5 61 aa3.31□□□□□ -1.88
PHGDH-219ENST00000641513 KRTAP2-3P0C7H8 128 aa3.27□□□□□ -1.89
PHGDH-219ENST00000641513 KRTAP2-4Q9BYR9 128 aa3.27□□□□□ -1.89
PHGDH-219ENST00000641513 KRTAP19-7Q3SYF9 63 aa3.23□□□□□ -1.89
PHGDH-219ENST00000641513 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.21□□□□□ -1.9
PHGDH-219ENST00000641513 MT1EP04732 61 aa3.19□□□□□ -1.9
PHGDH-219ENST00000641513 SPRR2FQ96RM1 72 aa3.17□□□□□ -1.9
PHGDH-219ENST00000641513 LCE3CQ5T5A8 94 aa3.14□□□□□ -1.91
PHGDH-219ENST00000641513 MT1LQ93083 61 aa3.13□□□□□ -1.91
PHGDH-219ENST00000641513 KRTAP2-2Q9BYT5 123 aa3.12□□□□□ -1.91
PHGDH-219ENST00000641513 KRTAP2-1Q9BYU5 128 aa3.12□□□□□ -1.91
PHGDH-219ENST00000641513 INE1O15225 51 aa3.1□□□□□ -1.91
PHGDH-219ENST00000641513 KRTAP19-3Q7Z4W3 81 aa3.07□□□□□ -1.92
PHGDH-219ENST00000641513 KRTAP5-11Q6L8G4 156 aa3.06□□□□□ -1.92
PHGDH-219ENST00000641513 AHNAK2Q8IVF2 5795 aa3.06□□□□□ -1.92
PHGDH-219ENST00000641513 MT1GP13640 62 aa3.04□□□□□ -1.92
PHGDH-219ENST00000641513 KRTAP5-9P26371 169 aa3.04□□□□□ -1.92
PHGDH-219ENST00000641513 MT1MQ8N339 61 aa3.02□□□□□ -1.93
PHGDH-219ENST00000641513 SPRR2EP22531 72 aa3.01□□□□□ -1.93
PHGDH-219ENST00000641513 SPRR2BP35325 72 aa3.01□□□□□ -1.93
PHGDH-219ENST00000641513 SPRR2AP35326 72 aa3.01□□□□□ -1.93
PHGDH-219ENST00000641513 LCE1AQ5T7P2 110 aa2.98□□□□□ -1.93
PHGDH-219ENST00000641513 KRTAP4-3Q9BYR4 195 aa2.98□□□□□ -1.93
PHGDH-219ENST00000641513 KRTAP9-6A8MVA2 160 aa2.94□□□□□ -1.94
PHGDH-219ENST00000641513 HMCN1Q96RW7 5635 aa2.92□□□□□ -1.94
PHGDH-219ENST00000641513 DSTQ03001 7570 aaKnown RBP2.91□□□□□ -1.94
PHGDH-219ENST00000641513 SPRR2DP22532 72 aa2.9□□□□□ -1.95
PHGDH-219ENST00000641513 KRTAP5-10Q6L8G5 202 aa2.83□□□□□ -1.96
PHGDH-219ENST00000641513 KRTAP5-7Q6L8G8 165 aa2.8□□□□□ -1.96
PHGDH-219ENST00000641513 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
PHGDH-219ENST00000641513 LCE1EQ5T753 118 aa2.76□□□□□ -1.97
PHGDH-219ENST00000641513 AHNAKQ09666 5890 aaKnown RBP2.75□□□□□ -1.97
PHGDH-219ENST00000641513 KRTAP5-4Q6L8H1 288 aa2.7□□□□□ -1.98
PHGDH-219ENST00000641513 MT3P25713 68 aa2.69□□□□□ -1.98
PHGDH-219ENST00000641513 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
PHGDH-219ENST00000641513 MT1AP04731 61 aa2.67□□□□□ -1.98
PHGDH-219ENST00000641513 KRTAP5-5Q701N2 237 aaPredicted RBP2.67□□□□□ -1.98
PHGDH-219ENST00000641513 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.98
PHGDH-219ENST00000641513 KRTAP6-1Q3LI64 71 aa2.65□□□□□ -1.99
PHGDH-219ENST00000641513 MT4P47944 62 aa2.58□□□□□ -2
PHGDH-219ENST00000641513 MUC5ACP98088 5654 aa2.58□□□□□ -2
PHGDH-219ENST00000641513 KRTAP12-4P60329 112 aa2.54□□□□□ -2
PHGDH-219ENST00000641513 SYNE1Q8NF91 8797 aaKnown RBP2.5□□□□□ -2.01
PHGDH-219ENST00000641513 KRTAP6-2Q3LI66 62 aa2.45□□□□□ -2.02
PHGDH-219ENST00000641513 LCE1FQ5T754 118 aa2.45□□□□□ -2.02
PHGDH-219ENST00000641513 OBSCNQ5VST9 7968 aa2.42□□□□□ -2.02
PHGDH-219ENST00000641513 KRTAP20-2Q3LI61 65 aa2.41□□□□□ -2.02
PHGDH-219ENST00000641513 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
PHGDH-219ENST00000641513 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
PHGDH-219ENST00000641513 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
PHGDH-219ENST00000641513 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
PHGDH-219ENST00000641513 PRM1P04553 51 aa2.17□□□□□ -2.06
PHGDH-219ENST00000641513 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.08
PHGDH-219ENST00000641513 LCE1CQ5T751 118 aa1.92□□□□□ -2.1
PHGDH-219ENST00000641513 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
PHGDH-219ENST00000641513 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
PHGDH-219ENST00000641513 MUC19Q7Z5P9 8384 aa1.52□□□□□ -2.17
PHGDH-219ENST00000641513 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
PHGDH-219ENST00000641513 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 5.9 ms