RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 COL5A1-AS1Q5SY13 56 aa-1.29□□□□□ -2.62
CCDC7-215ENST00000639629 SNAPC5O75971 98 aa-1.29□□□□□ -2.62
CCDC7-215ENST00000639629 FAUP35544 74 aaKnown RBP-1.29□□□□□ -2.62
CCDC7-215ENST00000639629 GNG14A0A1W2PPG7 69 aa-1.3□□□□□ -2.62
CCDC7-215ENST00000639629 H3BSH0 61 aa-1.3□□□□□ -2.62
CCDC7-215ENST00000639629 C2orf88Q9BSF0 95 aa-1.3□□□□□ -2.62
CCDC7-215ENST00000639629 GNG4P50150 75 aa-1.3□□□□□ -2.62
CCDC7-215ENST00000639629 PPP3R1P63098 170 aa-1.3□□□□□ -2.62
CCDC7-215ENST00000639629 ENHOQ6UWT2 76 aa-1.31□□□□□ -2.62
CCDC7-215ENST00000639629 LINC00643Q86TS7 51 aa-1.31□□□□□ -2.62
CCDC7-215ENST00000639629 TMEM203Q969S6 136 aa-1.32□□□□□ -2.62
CCDC7-215ENST00000639629 NMES1Q9C002 83 aa-1.32□□□□□ -2.62
CCDC7-215ENST00000639629 SNRPFP62306 86 aaKnown RBP-1.32□□□□□ -2.62
CCDC7-215ENST00000639629 LINC00308Q8TCZ7 52 aa-1.33□□□□□ -2.62
CCDC7-215ENST00000639629 TSC22D3Q99576 134 aa-1.33□□□□□ -2.62
CCDC7-215ENST00000639629 DEFB108AA8MXU0 73 aa-1.33□□□□□ -2.62
CCDC7-215ENST00000639629 A0A087WXM4 84 aa-1.34□□□□□ -2.62
CCDC7-215ENST00000639629 SMIM13P0DJ93 91 aa-1.34□□□□□ -2.62
CCDC7-215ENST00000639629 PTMSP20962 102 aa-1.34□□□□□ -2.62
CCDC7-215ENST00000639629 HTN1P15515 57 aa-1.34□□□□□ -2.62
CCDC7-215ENST00000639629 GTF2H5Q6ZYL4 71 aa-1.34□□□□□ -2.62
CCDC7-215ENST00000639629 DLEU1O43261 78 aa-1.35□□□□□ -2.63
CCDC7-215ENST00000639629 CORTO00230 105 aa-1.35□□□□□ -2.63
CCDC7-215ENST00000639629 SMIM2Q9BVW6 85 aa-1.36□□□□□ -2.63
CCDC7-215ENST00000639629 S100A10P60903 97 aa-1.37□□□□□ -2.63
CCDC7-215ENST00000639629 IGIPA6NJ69 53 aa-1.37□□□□□ -2.63
CCDC7-215ENST00000639629 NDUFA2O43678 99 aa-1.37□□□□□ -2.63
CCDC7-215ENST00000639629 A0A096LNI7 61 aa-1.38□□□□□ -2.63
CCDC7-215ENST00000639629 H3BUT2 72 aa-1.38□□□□□ -2.63
CCDC7-215ENST00000639629 NDUFA1O15239 70 aa-1.38□□□□□ -2.63
CCDC7-215ENST00000639629 KANTRA0A1W2PQU2 76 aa-1.39□□□□□ -2.63
CCDC7-215ENST00000639629 H0YGX0 51 aa-1.39□□□□□ -2.63
CCDC7-215ENST00000639629 HMGN1P05114 100 aa-1.39□□□□□ -2.63
CCDC7-215ENST00000639629 PYY3Q5JQD4 70 aa-1.4□□□□□ -2.63
CCDC7-215ENST00000639629 SNHG12Q9BXW3 62 aa-1.4□□□□□ -2.63
CCDC7-215ENST00000639629 A0A1B0GV90 55 aa-1.4□□□□□ -2.63
CCDC7-215ENST00000639629 S100A16Q96FQ6 103 aaKnown RBP-1.4□□□□□ -2.63
CCDC7-215ENST00000639629 M0R1W7 72 aa-1.41□□□□□ -2.63
CCDC7-215ENST00000639629 ATXN8Q156A1 80 aa-1.41□□□□□ -2.63
CCDC7-215ENST00000639629 GNG8Q9UK08 70 aa-1.41□□□□□ -2.63
CCDC7-215ENST00000639629 LOC105371267A0A1B0GV96 52 aa-1.42□□□□□ -2.64
CCDC7-215ENST00000639629 H3BVH4 76 aa-1.43□□□□□ -2.64
CCDC7-215ENST00000639629 DEFB108BQ8NET1 73 aa-1.43□□□□□ -2.64
CCDC7-215ENST00000639629 TCEAL7Q9BRU2 100 aa-1.43□□□□□ -2.64
CCDC7-215ENST00000639629 PDCD5O14737 125 aa-1.44□□□□□ -2.64
CCDC7-215ENST00000639629 TOMM7Q9P0U1 55 aa-1.44□□□□□ -2.64
CCDC7-215ENST00000639629 A0A096LPF7 62 aa-1.45□□□□□ -2.64
CCDC7-215ENST00000639629 PRCDQ00LT1 54 aa-1.46□□□□□ -2.64
CCDC7-215ENST00000639629 HTN3P15516 51 aa-1.46□□□□□ -2.64
CCDC7-215ENST00000639629 ST20Q9HBF5 79 aa-1.47□□□□□ -2.64
CCDC7-215ENST00000639629 K7EIM0 57 aa-1.47□□□□□ -2.65
CCDC7-215ENST00000639629 C18orf32Q8TCD1 76 aa-1.48□□□□□ -2.65
CCDC7-215ENST00000639629 Q9H521 79 aa-1.48□□□□□ -2.65
CCDC7-215ENST00000639629 EFCAB10A6NFE3 127 aa-1.48□□□□□ -2.65
CCDC7-215ENST00000639629 ADIRFQ15847 76 aa-1.48□□□□□ -2.65
CCDC7-215ENST00000639629 M0R143 59 aa-1.49□□□□□ -2.65
CCDC7-215ENST00000639629 C14orf144Q96I85 54 aa-1.49□□□□□ -2.65
CCDC7-215ENST00000639629 GNG13Q9P2W3 67 aa-1.49□□□□□ -2.65
CCDC7-215ENST00000639629 PLNP26678 52 aa-1.5□□□□□ -2.65
CCDC7-215ENST00000639629 HILPDAQ9Y5L2 63 aa-1.5□□□□□ -2.65
CCDC7-215ENST00000639629 ATP6V1G2-DDX39BF2Z307 99 aa-1.51□□□□□ -2.65
CCDC7-215ENST00000639629 CMC2Q9NRP2 79 aa-1.51□□□□□ -2.65
CCDC7-215ENST00000639629 V9GYS6 101 aa-1.52□□□□□ -2.65
CCDC7-215ENST00000639629 SMIM5Q71RC9 77 aa-1.53□□□□□ -2.65
CCDC7-215ENST00000639629 S100A13Q99584 98 aa-1.53□□□□□ -2.65
CCDC7-215ENST00000639629 TMEM167AQ8TBQ9 72 aa-1.56□□□□□ -2.66
CCDC7-215ENST00000639629 APELAP0DMC3 54 aa-1.59□□□□□ -2.66
CCDC7-215ENST00000639629 RPL39P62891 51 aaKnown RBP-1.6□□□□□ -2.67
CCDC7-215ENST00000639629 SMCO4Q9NRQ5 59 aa-1.62□□□□□ -2.67
CCDC7-215ENST00000639629 RPL39LQ96EH5 51 aaKnown RBP-1.63□□□□□ -2.67
CCDC7-215ENST00000639629 ARHGAP5-AS1Q96IT6 56 aa-1.73□□□□□ -2.69
CCDC7-215ENST00000639629 GNG2P59768 71 aa-1.74□□□□□ -2.69
CCDC7-215ENST00000639629 SNRPGP15A8MWD9 76 aa-1.77□□□□□ -2.69
CCDC7-215ENST00000639629 SNRPGP62308 76 aaKnown RBP-1.77□□□□□ -2.69
CCDC7-215ENST00000639629 RPL39P5Q59GN2 51 aa-1.88□□□□□ -2.71
CCDC7-215ENST00000639629 TOMM5Q8N4H5 51 aa-1.93□□□□□ -2.72
CCDC7-215ENST00000639629 SMIM31A0A1B0GVY4 71 aa-1.95□□□□□ -2.72
Retrieved 77 of 20,778 RNA–protein pairs in 35 ms