RNA–Protein interactions for RNA: ENST00000638824.1

NEK1-209, Transcript of NIMA related kinase 1, humanhuman

TSL 5

Gene NEK1, Length 3,642 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-209ENST00000638824 KRTAP5-2Q701N4 177 aa1.34□□□□□ -2.2
NEK1-209ENST00000638824 COA5Q86WW8 74 aa1.34□□□□□ -2.2
NEK1-209ENST00000638824 USH2AO75445 5202 aa1.33□□□□□ -2.2
NEK1-209ENST00000638824 LCE1FQ5T754 118 aa1.33□□□□□ -2.2
NEK1-209ENST00000638824 A0A1B0GU69 56 aa1.31□□□□□ -2.2
NEK1-209ENST00000638824 H0YAA0 97 aa1.31□□□□□ -2.2
NEK1-209ENST00000638824 KRTAP10-7P60409 375 aaPredicted RBP1.31□□□□□ -2.2
NEK1-209ENST00000638824 KRTAP5-5Q701N2 237 aaPredicted RBP1.3□□□□□ -2.2
NEK1-209ENST00000638824 SPRR5A0A1B0GTR4 108 aa1.29□□□□□ -2.2
NEK1-209ENST00000638824 SPRR2GQ9BYE4 73 aa1.29□□□□□ -2.2
NEK1-209ENST00000638824 AHNAKQ09666 5890 aaKnown RBP1.29□□□□□ -2.2
NEK1-209ENST00000638824 M0QZ58 72 aa1.28□□□□□ -2.2
NEK1-209ENST00000638824 MT1BP07438 61 aa1.28□□□□□ -2.21
NEK1-209ENST00000638824 A0A0D9SG42 100 aa1.27□□□□□ -2.21
NEK1-209ENST00000638824 KRTAP19-8Q3LI54 63 aa1.27□□□□□ -2.21
NEK1-209ENST00000638824 KRTAP13-4Q3LI77 160 aa1.27□□□□□ -2.21
NEK1-209ENST00000638824 KRTAP4-4Q9BYR3 166 aa1.26□□□□□ -2.21
NEK1-209ENST00000638824 FCGBPQ9Y6R7 5405 aaPredicted RBP1.26□□□□□ -2.21
NEK1-209ENST00000638824 KRTAP5-1Q6L8H4 278 aa1.25□□□□□ -2.21
NEK1-209ENST00000638824 KRTAP19-6Q3LI70 58 aa1.25□□□□□ -2.21
NEK1-209ENST00000638824 LCE3CQ5T5A8 94 aa1.25□□□□□ -2.21
NEK1-209ENST00000638824 AHNAK2Q8IVF2 5795 aa1.24□□□□□ -2.21
NEK1-209ENST00000638824 INE1O15225 51 aa1.24□□□□□ -2.21
NEK1-209ENST00000638824 KRTAP2-3P0C7H8 128 aa1.24□□□□□ -2.21
NEK1-209ENST00000638824 KRTAP2-4Q9BYR9 128 aa1.24□□□□□ -2.21
NEK1-209ENST00000638824 C10orf95Q9H7T3 257 aa1.22□□□□□ -2.21
NEK1-209ENST00000638824 KRTAP10-5P60370 271 aa1.22□□□□□ -2.21
NEK1-209ENST00000638824 MT1XP80297 61 aa1.22□□□□□ -2.21
NEK1-209ENST00000638824 PLAC4Q8WY50 150 aa1.22□□□□□ -2.21
NEK1-209ENST00000638824 KRTAP6-3Q3LI67 103 aa1.22□□□□□ -2.21
NEK1-209ENST00000638824 OBSCNQ5VST9 7968 aa1.21□□□□□ -2.22
NEK1-209ENST00000638824 KRTAP12-2P59991 146 aa1.2□□□□□ -2.22
NEK1-209ENST00000638824 KRTAP12-1P59990 96 aa1.2□□□□□ -2.22
NEK1-209ENST00000638824 PP632Q6XCG6 107 aa1.2□□□□□ -2.22
NEK1-209ENST00000638824 KMT2DO14686 5537 aa1.19□□□□□ -2.22
NEK1-209ENST00000638824 LCE3EQ5T5B0 92 aa1.17□□□□□ -2.22
NEK1-209ENST00000638824 KRTAP5-7Q6L8G8 165 aa1.17□□□□□ -2.22
NEK1-209ENST00000638824 KRTAP2-1Q9BYU5 128 aa1.15□□□□□ -2.22
NEK1-209ENST00000638824 KRTAP9-6A8MVA2 160 aa1.15□□□□□ -2.23
NEK1-209ENST00000638824 KRTAP10-12P60413 245 aa1.14□□□□□ -2.23
NEK1-209ENST00000638824 DSTQ03001 7570 aaKnown RBP1.14□□□□□ -2.23
NEK1-209ENST00000638824 KRTAP8-1Q8IUC2 63 aa1.13□□□□□ -2.23
NEK1-209ENST00000638824 MUC12Q9UKN1 5478 aa1.12□□□□□ -2.23
NEK1-209ENST00000638824 SPRR2FQ96RM1 72 aa1.11□□□□□ -2.23
NEK1-209ENST00000638824 MDN1Q9NU22 5596 aa1.11□□□□□ -2.23
NEK1-209ENST00000638824 TNP1P09430 55 aa1.11□□□□□ -2.23
NEK1-209ENST00000638824 LCE3AQ5TA76 89 aa1.1□□□□□ -2.23
NEK1-209ENST00000638824 KRTAP5-10Q6L8G5 202 aa1.09□□□□□ -2.23
NEK1-209ENST00000638824 KRTAP19-7Q3SYF9 63 aa1.09□□□□□ -2.24
NEK1-209ENST00000638824 KRTAP19-5Q3LI72 72 aa1.08□□□□□ -2.24
NEK1-209ENST00000638824 SPRR2EP22531 72 aa1.08□□□□□ -2.24
NEK1-209ENST00000638824 SPRR2BP35325 72 aa1.08□□□□□ -2.24
NEK1-209ENST00000638824 SPRR2AP35326 72 aa1.08□□□□□ -2.24
NEK1-209ENST00000638824 LCE3DQ9BYE3 92 aa1.07□□□□□ -2.24
NEK1-209ENST00000638824 MT1EP04732 61 aa1.07□□□□□ -2.24
NEK1-209ENST00000638824 KRTAP4-3Q9BYR4 195 aa1.06□□□□□ -2.24
NEK1-209ENST00000638824 SPRR2DP22532 72 aa1.04□□□□□ -2.24
NEK1-209ENST00000638824 KRTAP12-3P60328 96 aa1.04□□□□□ -2.24
NEK1-209ENST00000638824 KRTAP19-3Q7Z4W3 81 aa1.04□□□□□ -2.24
NEK1-209ENST00000638824 MT1LQ93083 61 aa1.04□□□□□ -2.24
NEK1-209ENST00000638824 MUC5ACP98088 5654 aa1.03□□□□□ -2.24
NEK1-209ENST00000638824 MT1MQ8N339 61 aa1.01□□□□□ -2.25
NEK1-209ENST00000638824 MT1GP13640 62 aa1.01□□□□□ -2.25
NEK1-209ENST00000638824 KRTAP12-4P60329 112 aa0.98□□□□□ -2.25
NEK1-209ENST00000638824 MT4P47944 62 aa0.92□□□□□ -2.26
NEK1-209ENST00000638824 LCE1CQ5T751 118 aa0.89□□□□□ -2.27
NEK1-209ENST00000638824 LCE1BQ5T7P3 118 aa0.89□□□□□ -2.27
NEK1-209ENST00000638824 KRTAP6-1Q3LI64 71 aa0.88□□□□□ -2.27
NEK1-209ENST00000638824 MT1AP04731 61 aa0.87□□□□□ -2.27
NEK1-209ENST00000638824 SYNE1Q8NF91 8797 aaKnown RBP0.87□□□□□ -2.27
NEK1-209ENST00000638824 KRTAP20-2Q3LI61 65 aa0.87□□□□□ -2.27
NEK1-209ENST00000638824 MUC19Q7Z5P9 8384 aa0.85□□□□□ -2.27
NEK1-209ENST00000638824 KRTAP6-2Q3LI66 62 aa0.83□□□□□ -2.28
NEK1-209ENST00000638824 PRM1P04553 51 aa0.7□□□□□ -2.3
NEK1-209ENST00000638824 PHGR1C9JFL3 82 aa0.7□□□□□ -2.3
NEK1-209ENST00000638824 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
NEK1-209ENST00000638824 KRTAP21-2Q3LI59 83 aa0.64□□□□□ -2.31
NEK1-209ENST00000638824 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 48.3 ms