RNA–Protein interactions for RNA: ENST00000636420.1

PCCA-212, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 5

Gene PCCA, Length 1,418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-212ENST00000636420 MT2AP02795 61 aa3.63□□□□□ -1.83
PCCA-212ENST00000636420 MT1FP04733 61 aa3.61□□□□□ -1.83
PCCA-212ENST00000636420 CAMK2N1Q7Z7J9 78 aa3.55□□□□□ -1.84
PCCA-212ENST00000636420 MDN1Q9NU22 5596 aa3.54□□□□□ -1.84
PCCA-212ENST00000636420 TNP1P09430 55 aa3.5□□□□□ -1.85
PCCA-212ENST00000636420 KRTAP10-10P60014 251 aa3.5□□□□□ -1.85
PCCA-212ENST00000636420 PRO2289Q9P1D8 64 aa3.5□□□□□ -1.85
PCCA-212ENST00000636420 KMT2DO14686 5537 aa3.49□□□□□ -1.85
PCCA-212ENST00000636420 LCE1AQ5T7P2 110 aa3.48□□□□□ -1.85
PCCA-212ENST00000636420 GPR98Q8WXG9 6306 aa3.48□□□□□ -1.85
PCCA-212ENST00000636420 INE1O15225 51 aa3.46□□□□□ -1.86
PCCA-212ENST00000636420 KRTAP2-3P0C7H8 128 aa3.44□□□□□ -1.86
PCCA-212ENST00000636420 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.44□□□□□ -1.86
PCCA-212ENST00000636420 KRTAP2-4Q9BYR9 128 aa3.44□□□□□ -1.86
PCCA-212ENST00000636420 KRTAP5-9P26371 169 aa3.42□□□□□ -1.86
PCCA-212ENST00000636420 KRTAP5-11Q6L8G4 156 aa3.41□□□□□ -1.86
PCCA-212ENST00000636420 KRTAP10-7P60409 375 aaPredicted RBP3.36□□□□□ -1.87
PCCA-212ENST00000636420 MT3P25713 68 aa3.3□□□□□ -1.88
PCCA-212ENST00000636420 KRTAP2-2Q9BYT5 123 aa3.3□□□□□ -1.88
PCCA-212ENST00000636420 KRTAP2-1Q9BYU5 128 aa3.3□□□□□ -1.88
PCCA-212ENST00000636420 SPRR2GQ9BYE4 73 aa3.27□□□□□ -1.89
PCCA-212ENST00000636420 KRTAP8-1Q8IUC2 63 aa3.25□□□□□ -1.89
PCCA-212ENST00000636420 SPRR2EP22531 72 aa3.21□□□□□ -1.9
PCCA-212ENST00000636420 SPRR2BP35325 72 aa3.21□□□□□ -1.9
PCCA-212ENST00000636420 SPRR2AP35326 72 aa3.21□□□□□ -1.9
PCCA-212ENST00000636420 MT1BP07438 61 aa3.2□□□□□ -1.9
PCCA-212ENST00000636420 KRTAP10-5P60370 271 aa3.19□□□□□ -1.9
PCCA-212ENST00000636420 LCE3AQ5TA76 89 aa3.17□□□□□ -1.9
PCCA-212ENST00000636420 SPRR2FQ96RM1 72 aa3.16□□□□□ -1.9
PCCA-212ENST00000636420 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
PCCA-212ENST00000636420 SPRR2DP22532 72 aa3.1□□□□□ -1.91
PCCA-212ENST00000636420 KRTAP19-8Q3LI54 63 aa3.1□□□□□ -1.91
PCCA-212ENST00000636420 DSTQ03001 7570 aaKnown RBP3.1□□□□□ -1.91
PCCA-212ENST00000636420 KRTAP10-12P60413 245 aa3.08□□□□□ -1.92
PCCA-212ENST00000636420 KRTAP12-3P60328 96 aa3.07□□□□□ -1.92
PCCA-212ENST00000636420 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
PCCA-212ENST00000636420 HMCN1Q96RW7 5635 aa3.02□□□□□ -1.93
PCCA-212ENST00000636420 AHNAK2Q8IVF2 5795 aa3□□□□□ -1.93
PCCA-212ENST00000636420 KRTAP5-1Q6L8H4 278 aa2.99□□□□□ -1.93
PCCA-212ENST00000636420 MT1XP80297 61 aa2.98□□□□□ -1.93
PCCA-212ENST00000636420 LCE3CQ5T5A8 94 aa2.93□□□□□ -1.94
PCCA-212ENST00000636420 KRTAP5-10Q6L8G5 202 aa2.93□□□□□ -1.94
PCCA-212ENST00000636420 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
PCCA-212ENST00000636420 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
PCCA-212ENST00000636420 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
PCCA-212ENST00000636420 KRTAP19-5Q3LI72 72 aa2.79□□□□□ -1.96
PCCA-212ENST00000636420 KRTAP9-6A8MVA2 160 aa2.77□□□□□ -1.97
PCCA-212ENST00000636420 MT4P47944 62 aa2.76□□□□□ -1.97
PCCA-212ENST00000636420 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
PCCA-212ENST00000636420 KRTAP19-7Q3SYF9 63 aa2.66□□□□□ -1.98
PCCA-212ENST00000636420 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
PCCA-212ENST00000636420 KRTAP19-3Q7Z4W3 81 aa2.62□□□□□ -1.99
PCCA-212ENST00000636420 MT1EP04732 61 aa2.61□□□□□ -1.99
PCCA-212ENST00000636420 MT1LQ93083 61 aa2.61□□□□□ -1.99
PCCA-212ENST00000636420 MUC5ACP98088 5654 aa2.57□□□□□ -2
PCCA-212ENST00000636420 MUC5BQ9HC84 5762 aaPredicted RBP2.55□□□□□ -2
PCCA-212ENST00000636420 LCE3EQ5T5B0 92 aa2.55□□□□□ -2
PCCA-212ENST00000636420 KRTAP20-2Q3LI61 65 aa2.51□□□□□ -2.01
PCCA-212ENST00000636420 KRTAP4-3Q9BYR4 195 aa2.51□□□□□ -2.01
PCCA-212ENST00000636420 MT1GP13640 62 aa2.5□□□□□ -2.01
PCCA-212ENST00000636420 KRTAP12-4P60329 112 aa2.5□□□□□ -2.01
PCCA-212ENST00000636420 MT1MQ8N339 61 aa2.49□□□□□ -2.01
PCCA-212ENST00000636420 MT1AP04731 61 aa2.45□□□□□ -2.02
PCCA-212ENST00000636420 KRTAP5-2Q701N4 177 aa2.42□□□□□ -2.02
PCCA-212ENST00000636420 SYNE1Q8NF91 8797 aaKnown RBP2.38□□□□□ -2.03
PCCA-212ENST00000636420 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
PCCA-212ENST00000636420 KRTAP5-5Q701N2 237 aaPredicted RBP2.35□□□□□ -2.03
PCCA-212ENST00000636420 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
PCCA-212ENST00000636420 PRM1P04553 51 aa2.23□□□□□ -2.05
PCCA-212ENST00000636420 KRTAP6-1Q3LI64 71 aa2.16□□□□□ -2.06
PCCA-212ENST00000636420 KRTAP6-2Q3LI66 62 aa2.1□□□□□ -2.07
PCCA-212ENST00000636420 LCE1CQ5T751 118 aa2.02□□□□□ -2.09
PCCA-212ENST00000636420 LCE1BQ5T7P3 118 aa2.02□□□□□ -2.09
PCCA-212ENST00000636420 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
PCCA-212ENST00000636420 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
PCCA-212ENST00000636420 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
PCCA-212ENST00000636420 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
PCCA-212ENST00000636420 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 359.9 ms