RNA–Protein interactions for RNA: ENST00000626466.1

TCF4-253, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-253ENST00000626466 GPR98Q8WXG9 6306 aa4.37□□□□□ -1.71
TCF4-253ENST00000626466 MT3P25713 68 aa4.33□□□□□ -1.72
TCF4-253ENST00000626466 MIR22HGQ0VDD5 57 aa4.33□□□□□ -1.72
TCF4-253ENST00000626466 NDUFAF8A1L188 74 aa4.32□□□□□ -1.72
TCF4-253ENST00000626466 KRTAP10-7P60409 375 aaPredicted RBP4.31□□□□□ -1.72
TCF4-253ENST00000626466 SPATA8Q6RVD6 105 aa4.3□□□□□ -1.72
TCF4-253ENST00000626466 A0A1B0GU33 70 aa4.29□□□□□ -1.72
TCF4-253ENST00000626466 H0YAA0 97 aa4.28□□□□□ -1.72
TCF4-253ENST00000626466 ADM2Q7Z4H4 148 aa4.28□□□□□ -1.72
TCF4-253ENST00000626466 PMAIP1Q13794 54 aa4.26□□□□□ -1.73
TCF4-253ENST00000626466 PLAC4Q8WY50 150 aa4.26□□□□□ -1.73
TCF4-253ENST00000626466 A8MU10 97 aa4.22□□□□□ -1.73
TCF4-253ENST00000626466 K7ERS5 55 aa4.21□□□□□ -1.74
TCF4-253ENST00000626466 KRTAP10-12P60413 245 aa4.21□□□□□ -1.74
TCF4-253ENST00000626466 P0C880 135 aa4.19□□□□□ -1.74
TCF4-253ENST00000626466 DSTQ03001 7570 aaKnown RBP4.16□□□□□ -1.74
TCF4-253ENST00000626466 R4GN34 69 aa4.15□□□□□ -1.75
TCF4-253ENST00000626466 M0QZ58 72 aa4.14□□□□□ -1.75
TCF4-253ENST00000626466 KTN1-AS1Q86SY8 53 aa4.13□□□□□ -1.75
TCF4-253ENST00000626466 LINC01554Q52M75 96 aa4.12□□□□□ -1.75
TCF4-253ENST00000626466 A0A0D9SG42 100 aa4.06□□□□□ -1.76
TCF4-253ENST00000626466 KRTAP13-4Q3LI77 160 aa4.04□□□□□ -1.76
TCF4-253ENST00000626466 KRTAP5-1Q6L8H4 278 aa4.02□□□□□ -1.77
TCF4-253ENST00000626466 KRTAP19-7Q3SYF9 63 aa4.01□□□□□ -1.77
TCF4-253ENST00000626466 MT1EP04732 61 aa3.98□□□□□ -1.77
TCF4-253ENST00000626466 MT4P47944 62 aa3.98□□□□□ -1.77
TCF4-253ENST00000626466 SPINT4Q6UDR6 99 aa3.98□□□□□ -1.77
TCF4-253ENST00000626466 KRTAP19-3Q7Z4W3 81 aa3.98□□□□□ -1.77
TCF4-253ENST00000626466 ROMO1P60602 79 aa3.97□□□□□ -1.77
TCF4-253ENST00000626466 KRTAP12-1P59990 96 aa3.95□□□□□ -1.78
TCF4-253ENST00000626466 KRTAP5-10Q6L8G5 202 aa3.95□□□□□ -1.78
TCF4-253ENST00000626466 KRTAP5-4Q6L8H1 288 aa3.95□□□□□ -1.78
TCF4-253ENST00000626466 AHNAK2Q8IVF2 5795 aa3.95□□□□□ -1.78
TCF4-253ENST00000626466 KRTAP4-4Q9BYR3 166 aa3.93□□□□□ -1.78
TCF4-253ENST00000626466 HMCN1Q96RW7 5635 aa3.92□□□□□ -1.78
TCF4-253ENST00000626466 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
TCF4-253ENST00000626466 LCE1FQ5T754 118 aa3.87□□□□□ -1.79
TCF4-253ENST00000626466 KRTAP25-1Q3LHN0 102 aa3.85□□□□□ -1.79
TCF4-253ENST00000626466 CAMK2N1Q7Z7J9 78 aa3.84□□□□□ -1.79
TCF4-253ENST00000626466 KRTAP19-5Q3LI72 72 aa3.82□□□□□ -1.8
TCF4-253ENST00000626466 KRTAP5-7Q6L8G8 165 aa3.82□□□□□ -1.8
TCF4-253ENST00000626466 MT1GP13640 62 aa3.81□□□□□ -1.8
TCF4-253ENST00000626466 MT1MQ8N339 61 aa3.81□□□□□ -1.8
TCF4-253ENST00000626466 KRTAP4-3Q9BYR4 195 aa3.81□□□□□ -1.8
TCF4-253ENST00000626466 PP632Q6XCG6 107 aa3.75□□□□□ -1.81
TCF4-253ENST00000626466 MT1LQ93083 61 aa3.75□□□□□ -1.81
TCF4-253ENST00000626466 C10orf95Q9H7T3 257 aa3.71□□□□□ -1.82
TCF4-253ENST00000626466 SPRR5A0A1B0GTR4 108 aa3.67□□□□□ -1.82
TCF4-253ENST00000626466 TNP1P09430 55 aa3.67□□□□□ -1.82
TCF4-253ENST00000626466 LCE3CQ5T5A8 94 aa3.64□□□□□ -1.83
TCF4-253ENST00000626466 KRTAP20-2Q3LI61 65 aa3.63□□□□□ -1.83
TCF4-253ENST00000626466 LCE3AQ5TA76 89 aa3.56□□□□□ -1.84
TCF4-253ENST00000626466 KRTAP5-5Q701N2 237 aaPredicted RBP3.53□□□□□ -1.84
TCF4-253ENST00000626466 KRTAP12-4P60329 112 aa3.44□□□□□ -1.86
TCF4-253ENST00000626466 KRTAP5-2Q701N4 177 aa3.4□□□□□ -1.87
TCF4-253ENST00000626466 SYNE1Q8NF91 8797 aaKnown RBP3.39□□□□□ -1.87
TCF4-253ENST00000626466 OBSCNQ5VST9 7968 aa3.38□□□□□ -1.87
TCF4-253ENST00000626466 KRTAP12-3P60328 96 aa3.37□□□□□ -1.87
TCF4-253ENST00000626466 KRTAP5-8O75690 187 aa3.31□□□□□ -1.88
TCF4-253ENST00000626466 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
TCF4-253ENST00000626466 AHNAKQ09666 5890 aaKnown RBP3.31□□□□□ -1.88
TCF4-253ENST00000626466 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
TCF4-253ENST00000626466 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
TCF4-253ENST00000626466 LUZP6Q538Z0 58 aa3.3□□□□□ -1.88
TCF4-253ENST00000626466 MUC5BQ9HC84 5762 aaPredicted RBP3.21□□□□□ -1.9
TCF4-253ENST00000626466 KRTAP6-1Q3LI64 71 aa3.2□□□□□ -1.9
TCF4-253ENST00000626466 MT1AP04731 61 aa3.16□□□□□ -1.9
TCF4-253ENST00000626466 KRTAP6-2Q3LI66 62 aa3.11□□□□□ -1.91
TCF4-253ENST00000626466 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
TCF4-253ENST00000626466 INE1O15225 51 aa2.74□□□□□ -1.97
TCF4-253ENST00000626466 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
TCF4-253ENST00000626466 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
TCF4-253ENST00000626466 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
TCF4-253ENST00000626466 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
TCF4-253ENST00000626466 KRTAP21-2Q3LI59 83 aa2.11□□□□□ -2.07
TCF4-253ENST00000626466 PRM1P04553 51 aa2.05□□□□□ -2.08
TCF4-253ENST00000626466 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
TCF4-253ENST00000626466 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 79.4 ms