RNA–Protein interactions for RNA: ENST00000625410.1

LINC01943-201, Transcript of long intergenic non-protein coding RNA 1943, humanhuman

TSL 2 BASIC

Gene LINC01943, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01943-201ENST00000625410 MT1XP80297 61 aa4.12□□□□□ -1.75
LINC01943-201ENST00000625410 KRTAP10-5P60370 271 aa4.11□□□□□ -1.75
LINC01943-201ENST00000625410 PLAC4Q8WY50 150 aa4.11□□□□□ -1.75
LINC01943-201ENST00000625410 KRTAP6-3Q3LI67 103 aa4.1□□□□□ -1.75
LINC01943-201ENST00000625410 NEBP20929 6669 aa4.03□□□□□ -1.76
LINC01943-201ENST00000625410 INE1O15225 51 aa3.98□□□□□ -1.77
LINC01943-201ENST00000625410 TNP1P09430 55 aa3.95□□□□□ -1.78
LINC01943-201ENST00000625410 KRTAP10-7P60409 375 aaPredicted RBP3.95□□□□□ -1.78
LINC01943-201ENST00000625410 MUC12Q9UKN1 5478 aa3.93□□□□□ -1.78
LINC01943-201ENST00000625410 KRTAP20-1Q3LI63 56 aa3.9□□□□□ -1.79
LINC01943-201ENST00000625410 LCE3AQ5TA76 89 aa3.89□□□□□ -1.79
LINC01943-201ENST00000625410 KRTAP10-12P60413 245 aa3.88□□□□□ -1.79
LINC01943-201ENST00000625410 PP632Q6XCG6 107 aa3.84□□□□□ -1.79
LINC01943-201ENST00000625410 KRTAP5-9P26371 169 aa3.83□□□□□ -1.8
LINC01943-201ENST00000625410 KRTAP8-1Q8IUC2 63 aa3.81□□□□□ -1.8
LINC01943-201ENST00000625410 KMT2DO14686 5537 aa3.79□□□□□ -1.8
LINC01943-201ENST00000625410 MDN1Q9NU22 5596 aa3.77□□□□□ -1.81
LINC01943-201ENST00000625410 KRTAP2-3P0C7H8 128 aa3.74□□□□□ -1.81
LINC01943-201ENST00000625410 KRTAP2-4Q9BYR9 128 aa3.74□□□□□ -1.81
LINC01943-201ENST00000625410 KRTAP19-5Q3LI72 72 aa3.7□□□□□ -1.82
LINC01943-201ENST00000625410 KRTAP19-7Q3SYF9 63 aa3.69□□□□□ -1.82
LINC01943-201ENST00000625410 KRTAP12-3P60328 96 aa3.68□□□□□ -1.82
LINC01943-201ENST00000625410 SPRR2EP22531 72 aa3.61□□□□□ -1.83
LINC01943-201ENST00000625410 SPRR2BP35325 72 aa3.61□□□□□ -1.83
LINC01943-201ENST00000625410 SPRR2AP35326 72 aa3.61□□□□□ -1.83
LINC01943-201ENST00000625410 SPRR2FQ96RM1 72 aa3.61□□□□□ -1.83
LINC01943-201ENST00000625410 KRTAP2-2Q9BYT5 123 aa3.61□□□□□ -1.83
LINC01943-201ENST00000625410 KRTAP2-1Q9BYU5 128 aa3.61□□□□□ -1.83
LINC01943-201ENST00000625410 MT1EP04732 61 aa3.6□□□□□ -1.83
LINC01943-201ENST00000625410 SPRR5A0A1B0GTR4 108 aa3.56□□□□□ -1.84
LINC01943-201ENST00000625410 LCE1AQ5T7P2 110 aa3.56□□□□□ -1.84
LINC01943-201ENST00000625410 MT3P25713 68 aa3.53□□□□□ -1.84
LINC01943-201ENST00000625410 MT1LQ93083 61 aa3.53□□□□□ -1.84
LINC01943-201ENST00000625410 SPRR2DP22532 72 aa3.49□□□□□ -1.85
LINC01943-201ENST00000625410 LCE3CQ5T5A8 94 aa3.45□□□□□ -1.86
LINC01943-201ENST00000625410 KRTAP19-3Q7Z4W3 81 aa3.42□□□□□ -1.86
LINC01943-201ENST00000625410 GPR98Q8WXG9 6306 aa3.41□□□□□ -1.86
LINC01943-201ENST00000625410 MT1MQ8N339 61 aa3.39□□□□□ -1.87
LINC01943-201ENST00000625410 KRTAP9-6A8MVA2 160 aa3.38□□□□□ -1.87
LINC01943-201ENST00000625410 DSTQ03001 7570 aaKnown RBP3.36□□□□□ -1.87
LINC01943-201ENST00000625410 MT1GP13640 62 aa3.36□□□□□ -1.87
LINC01943-201ENST00000625410 KRTAP4-3Q9BYR4 195 aa3.36□□□□□ -1.87
LINC01943-201ENST00000625410 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
LINC01943-201ENST00000625410 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
LINC01943-201ENST00000625410 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
LINC01943-201ENST00000625410 LCE1EQ5T753 118 aa3.2□□□□□ -1.9
LINC01943-201ENST00000625410 HMCN1Q96RW7 5635 aa3.11□□□□□ -1.91
LINC01943-201ENST00000625410 KRTAP5-10Q6L8G5 202 aa3.09□□□□□ -1.91
LINC01943-201ENST00000625410 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.91
LINC01943-201ENST00000625410 MT4P47944 62 aa3.07□□□□□ -1.92
LINC01943-201ENST00000625410 AHNAK2Q8IVF2 5795 aa3.04□□□□□ -1.92
LINC01943-201ENST00000625410 KRTAP5-4Q6L8H1 288 aa3.01□□□□□ -1.93
LINC01943-201ENST00000625410 KRTAP5-7Q6L8G8 165 aa3□□□□□ -1.93
LINC01943-201ENST00000625410 MT1AP04731 61 aa2.99□□□□□ -1.93
LINC01943-201ENST00000625410 KRTAP6-1Q3LI64 71 aa2.99□□□□□ -1.93
LINC01943-201ENST00000625410 SYNE1Q8NF91 8797 aaKnown RBP2.96□□□□□ -1.94
LINC01943-201ENST00000625410 KRTAP5-1Q6L8H4 278 aa2.89□□□□□ -1.95
LINC01943-201ENST00000625410 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.95
LINC01943-201ENST00000625410 KRTAP12-4P60329 112 aa2.81□□□□□ -1.96
LINC01943-201ENST00000625410 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
LINC01943-201ENST00000625410 KRTAP6-2Q3LI66 62 aa2.71□□□□□ -1.98
LINC01943-201ENST00000625410 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
LINC01943-201ENST00000625410 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
LINC01943-201ENST00000625410 KRTAP5-8O75690 187 aa2.59□□□□□ -1.99
LINC01943-201ENST00000625410 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
LINC01943-201ENST00000625410 MUC5ACP98088 5654 aa2.58□□□□□ -2
LINC01943-201ENST00000625410 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
LINC01943-201ENST00000625410 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
LINC01943-201ENST00000625410 OBSCNQ5VST9 7968 aa2.52□□□□□ -2.01
LINC01943-201ENST00000625410 PRM1P04553 51 aa2.23□□□□□ -2.05
LINC01943-201ENST00000625410 LCE1CQ5T751 118 aa2.16□□□□□ -2.06
LINC01943-201ENST00000625410 LCE1BQ5T7P3 118 aa2.16□□□□□ -2.06
LINC01943-201ENST00000625410 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
LINC01943-201ENST00000625410 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
LINC01943-201ENST00000625410 MUC19Q7Z5P9 8384 aa1.64□□□□□ -2.15
LINC01943-201ENST00000625410 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
LINC01943-201ENST00000625410 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 26.6 ms