RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 SYCP2Q9BX26 1530 aa-1.15□□□□□ -2.59
SCARNA4-202ENST00000625402 ABCA8O94911 1581 aa-1.16□□□□□ -2.59
SCARNA4-202ENST00000625402 LINC01590Q5TEZ4 76 aa-1.16□□□□□ -2.6
SCARNA4-202ENST00000625402 CCDC180Q9P1Z9 1646 aa-1.16□□□□□ -2.6
SCARNA4-202ENST00000625402 DNAH12Q6ZR08 3092 aa-1.17□□□□□ -2.6
SCARNA4-202ENST00000625402 PDCD5O14737 125 aa-1.17□□□□□ -2.6
SCARNA4-202ENST00000625402 LMO7Q8WWI1 1683 aa-1.17□□□□□ -2.6
SCARNA4-202ENST00000625402 ABCA9Q8IUA7 1624 aa-1.18□□□□□ -2.6
SCARNA4-202ENST00000625402 TRPM2O94759 1503 aa-1.18□□□□□ -2.6
SCARNA4-202ENST00000625402 TFF3Q07654 80 aa-1.19□□□□□ -2.6
SCARNA4-202ENST00000625402 SMCO4Q9NRQ5 59 aa-1.19□□□□□ -2.6
SCARNA4-202ENST00000625402 NRXN3Q9Y4C0 1643 aa-1.19□□□□□ -2.6
SCARNA4-202ENST00000625402 ASPMQ8IZT6 3477 aa-1.21□□□□□ -2.6
SCARNA4-202ENST00000625402 XIRP2A4UGR9 3374 aa-1.21□□□□□ -2.6
SCARNA4-202ENST00000625402 HTN1P15515 57 aa-1.21□□□□□ -2.6
SCARNA4-202ENST00000625402 UGGT2Q9NYU1 1516 aa-1.21□□□□□ -2.6
SCARNA4-202ENST00000625402 VCANP13611 3396 aa-1.21□□□□□ -2.6
SCARNA4-202ENST00000625402 RB1CC1Q8TDY2 1594 aa-1.21□□□□□ -2.6
SCARNA4-202ENST00000625402 CLTCL1P53675 1640 aa-1.22□□□□□ -2.6
SCARNA4-202ENST00000625402 ABCA5Q8WWZ7 1642 aa-1.22□□□□□ -2.6
SCARNA4-202ENST00000625402 LOC400499M0QZD8 3231 aa-1.22□□□□□ -2.6
SCARNA4-202ENST00000625402 TOMM7Q9P0U1 55 aa-1.22□□□□□ -2.6
SCARNA4-202ENST00000625402 CPS1P31327 1500 aa-1.22□□□□□ -2.6
SCARNA4-202ENST00000625402 KRTAP19-2Q3LHN2 52 aa-1.23□□□□□ -2.61
SCARNA4-202ENST00000625402 A0A087WWC5 75 aa-1.24□□□□□ -2.61
SCARNA4-202ENST00000625402 SMIM5Q71RC9 77 aa-1.24□□□□□ -2.61
SCARNA4-202ENST00000625402 ABCA10Q8WWZ4 1543 aa-1.25□□□□□ -2.61
SCARNA4-202ENST00000625402 A0A096LNI7 61 aa-1.25□□□□□ -2.61
SCARNA4-202ENST00000625402 NDUFA1O15239 70 aa-1.25□□□□□ -2.61
SCARNA4-202ENST00000625402 PRXQ9BXM0 1461 aa-1.25□□□□□ -2.61
SCARNA4-202ENST00000625402 IQGAP3Q86VI3 1631 aa-1.26□□□□□ -2.61
SCARNA4-202ENST00000625402 DDX60Q8IY21 1712 aaKnown RBP-1.26□□□□□ -2.61
SCARNA4-202ENST00000625402 DEFB124Q8NES8 71 aa-1.26□□□□□ -2.61
SCARNA4-202ENST00000625402 EFCAB5A4FU69 1503 aa-1.26□□□□□ -2.61
SCARNA4-202ENST00000625402 CMC2Q9NRP2 79 aa-1.27□□□□□ -2.61
SCARNA4-202ENST00000625402 CENPFP49454 3210 aa-1.27□□□□□ -2.61
SCARNA4-202ENST00000625402 ADCY10Q96PN6 1610 aa-1.3□□□□□ -2.62
SCARNA4-202ENST00000625402 CDH23Q9H251 3354 aa-1.31□□□□□ -2.62
SCARNA4-202ENST00000625402 BRCA2P51587 3418 aa-1.32□□□□□ -2.62
SCARNA4-202ENST00000625402 ABCC8Q09428 1581 aa-1.33□□□□□ -2.62
SCARNA4-202ENST00000625402 FANCD2Q9BXW9 1451 aa-1.33□□□□□ -2.62
SCARNA4-202ENST00000625402 NFAT5O94916 1531 aa-1.34□□□□□ -2.62
SCARNA4-202ENST00000625402 IQGAP1P46940 1657 aa-1.35□□□□□ -2.63
SCARNA4-202ENST00000625402 VPS13AQ96RL7 3174 aa-1.35□□□□□ -2.63
SCARNA4-202ENST00000625402 H3BUX3 64 aa-1.36□□□□□ -2.63
SCARNA4-202ENST00000625402 SAMD9LQ8IVG5 1584 aa-1.37□□□□□ -2.63
SCARNA4-202ENST00000625402 DUOX1Q9NRD9 1551 aa-1.37□□□□□ -2.63
SCARNA4-202ENST00000625402 LINC01556Q5JQF7 62 aa-1.37□□□□□ -2.63
SCARNA4-202ENST00000625402 TOP2AP11388 1531 aaKnown RBP-1.39□□□□□ -2.63
SCARNA4-202ENST00000625402 RPL39P62891 51 aaKnown RBP-1.39□□□□□ -2.63
SCARNA4-202ENST00000625402 ERICH3Q5RHP9 1530 aa-1.4□□□□□ -2.63
SCARNA4-202ENST00000625402 DEFB104AQ8WTQ1 72 aa-1.42□□□□□ -2.64
SCARNA4-202ENST00000625402 ATP7AQ04656 1500 aa-1.44□□□□□ -2.64
SCARNA4-202ENST00000625402 RPL39LQ96EH5 51 aaKnown RBP-1.44□□□□□ -2.64
SCARNA4-202ENST00000625402 UTRNP46939 3433 aa-1.45□□□□□ -2.64
SCARNA4-202ENST00000625402 MROH2BQ7Z745 1585 aa-1.47□□□□□ -2.64
SCARNA4-202ENST00000625402 SNRPGP15A8MWD9 76 aa-1.48□□□□□ -2.65
SCARNA4-202ENST00000625402 SMIM31A0A1B0GVY4 71 aa-1.5□□□□□ -2.65
SCARNA4-202ENST00000625402 K7EIM0 57 aa-1.5□□□□□ -2.65
SCARNA4-202ENST00000625402 APELAP0DMC3 54 aa-1.54□□□□□ -2.66
SCARNA4-202ENST00000625402 A0A096LPF7 62 aa-1.55□□□□□ -2.66
SCARNA4-202ENST00000625402 PRCDQ00LT1 54 aa-1.55□□□□□ -2.66
SCARNA4-202ENST00000625402 TOMM5Q8N4H5 51 aa-1.56□□□□□ -2.66
SCARNA4-202ENST00000625402 ARHGAP5-AS1Q96IT6 56 aa-1.56□□□□□ -2.66
SCARNA4-202ENST00000625402 Q9Y3F1 56 aa-1.56□□□□□ -2.66
SCARNA4-202ENST00000625402 TMEM167AQ8TBQ9 72 aa-1.58□□□□□ -2.66
SCARNA4-202ENST00000625402 IQGAP2Q13576 1575 aa-1.59□□□□□ -2.66
SCARNA4-202ENST00000625402 HTN3P15516 51 aa-1.61□□□□□ -2.67
SCARNA4-202ENST00000625402 GOLGB1Q14789 3259 aaKnown RBP-1.63□□□□□ -2.67
SCARNA4-202ENST00000625402 SNRPGP62308 76 aaKnown RBP-1.67□□□□□ -2.68
SCARNA4-202ENST00000625402 COX14Q96I36 57 aa-1.7□□□□□ -2.68
SCARNA4-202ENST00000625402 H3BSH0 61 aa-1.73□□□□□ -2.69
SCARNA4-202ENST00000625402 RPL39P5Q59GN2 51 aa-1.76□□□□□ -2.69
SCARNA4-202ENST00000625402 DEFB108AA8MXU0 73 aa-1.78□□□□□ -2.69
SCARNA4-202ENST00000625402 GCC2Q8IWJ2 1684 aa-1.79□□□□□ -2.7
SCARNA4-202ENST00000625402 DEFB108BQ8NET1 73 aa-1.88□□□□□ -2.71
SCARNA4-202ENST00000625402 STATHP02808 62 aa-2.02□□□□□ -2.73
Retrieved 77 of 20,778 RNA–protein pairs in 12.9 ms