RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 BPY2O14599 106 aa1.7□□□□□ -2.14
SNCA-213ENST00000618500 ATXN8Q156A1 80 aa1.7□□□□□ -2.14
SNCA-213ENST00000618500 K7ERS5 55 aa1.69□□□□□ -2.14
SNCA-213ENST00000618500 SNURFQ9Y675 71 aa1.69□□□□□ -2.14
SNCA-213ENST00000618500 PP632Q6XCG6 107 aa1.69□□□□□ -2.14
SNCA-213ENST00000618500 CYP4F30PQ9H0H9 118 aa1.69□□□□□ -2.14
SNCA-213ENST00000618500 Q8N9L7 120 aa1.69□□□□□ -2.14
SNCA-213ENST00000618500 LOC101927531A0A1B0GV80 90 aa1.68□□□□□ -2.14
SNCA-213ENST00000618500 R4GN34 69 aa1.68□□□□□ -2.14
SNCA-213ENST00000618500 HIST1H4AP62805 103 aaKnown RBP1.68□□□□□ -2.14
SNCA-213ENST00000618500 C14orf132Q9NPU4 83 aa1.67□□□□□ -2.14
SNCA-213ENST00000618500 MT1MQ8N339 61 aa1.66□□□□□ -2.14
SNCA-213ENST00000618500 KRTAP20-2Q3LI61 65 aa1.66□□□□□ -2.14
SNCA-213ENST00000618500 TRAV22A0A0B4J277 110 aa1.66□□□□□ -2.14
SNCA-213ENST00000618500 ROMO1P60602 79 aa1.66□□□□□ -2.14
SNCA-213ENST00000618500 M0QZ58 72 aa1.65□□□□□ -2.14
SNCA-213ENST00000618500 ATOX1O00244 68 aa1.64□□□□□ -2.15
SNCA-213ENST00000618500 KRTAP5-5Q701N2 237 aaPredicted RBP1.64□□□□□ -2.15
SNCA-213ENST00000618500 ACYP1P07311 99 aa1.64□□□□□ -2.15
SNCA-213ENST00000618500 SERP2Q8N6R1 65 aa1.63□□□□□ -2.15
SNCA-213ENST00000618500 DSTQ03001 7570 aaKnown RBP1.63□□□□□ -2.15
SNCA-213ENST00000618500 LCE3CQ5T5A8 94 aa1.63□□□□□ -2.15
SNCA-213ENST00000618500 KRTAP4-3Q9BYR4 195 aa1.63□□□□□ -2.15
SNCA-213ENST00000618500 TRAV7A0A075B6U4 112 aa1.62□□□□□ -2.15
SNCA-213ENST00000618500 P0C880 135 aa1.62□□□□□ -2.15
SNCA-213ENST00000618500 MIR22HGQ0VDD5 57 aa1.62□□□□□ -2.15
SNCA-213ENST00000618500 MT1LQ93083 61 aa1.61□□□□□ -2.15
SNCA-213ENST00000618500 MUC5ACP98088 5654 aa1.61□□□□□ -2.15
SNCA-213ENST00000618500 CHKB-CPT1BH3BT56 60 aa1.6□□□□□ -2.15
SNCA-213ENST00000618500 H7BZZ5 65 aa1.6□□□□□ -2.15
SNCA-213ENST00000618500 H3BPC8 53 aa1.59□□□□□ -2.16
SNCA-213ENST00000618500 Q1T7F1 81 aa1.59□□□□□ -2.16
SNCA-213ENST00000618500 KRTAP25-1Q3LHN0 102 aa1.58□□□□□ -2.16
SNCA-213ENST00000618500 KRTAP19-5Q3LI72 72 aa1.58□□□□□ -2.16
SNCA-213ENST00000618500 UBL5Q9BZL1 73 aa1.58□□□□□ -2.16
SNCA-213ENST00000618500 ATP5EP56381 51 aaPredicted RBP1.57□□□□□ -2.16
SNCA-213ENST00000618500 OBSCNQ5VST9 7968 aa1.57□□□□□ -2.16
SNCA-213ENST00000618500 KRTAP9-6A8MVA2 160 aa1.56□□□□□ -2.16
SNCA-213ENST00000618500 KRTAP12-4P60329 112 aa1.56□□□□□ -2.16
SNCA-213ENST00000618500 LINC00643Q86TS7 51 aa1.56□□□□□ -2.16
SNCA-213ENST00000618500 CDC42SE1Q9NRR8 79 aa1.55□□□□□ -2.16
SNCA-213ENST00000618500 DMAC1Q96GE9 116 aa1.54□□□□□ -2.16
SNCA-213ENST00000618500 H0Y9P7 68 aa1.53□□□□□ -2.17
SNCA-213ENST00000618500 PRR15LQ9BU68 103 aa1.52□□□□□ -2.17
SNCA-213ENST00000618500 C10orf95Q9H7T3 257 aa1.52□□□□□ -2.17
SNCA-213ENST00000618500 SPANXA2-OT1Q8N9U9 137 aa1.5□□□□□ -2.17
SNCA-213ENST00000618500 A0A0D9SG42 100 aa1.5□□□□□ -2.17
SNCA-213ENST00000618500 A0A1B0GU33 70 aa1.49□□□□□ -2.17
SNCA-213ENST00000618500 ATP5EP2Q5VTU8 51 aa1.49□□□□□ -2.17
SNCA-213ENST00000618500 LCE3EQ5T5B0 92 aa1.49□□□□□ -2.17
SNCA-213ENST00000618500 SPINT4Q6UDR6 99 aa1.48□□□□□ -2.17
SNCA-213ENST00000618500 LINC00208Q96KT6 92 aa1.47□□□□□ -2.17
SNCA-213ENST00000618500 LCE3AQ5TA76 89 aa1.45□□□□□ -2.18
SNCA-213ENST00000618500 KRTAP13-4Q3LI77 160 aa1.43□□□□□ -2.18
SNCA-213ENST00000618500 LINC01558Q9Y6Z2 57 aa1.42□□□□□ -2.18
SNCA-213ENST00000618500 ACYP2P14621 99 aa1.42□□□□□ -2.18
SNCA-213ENST00000618500 MT1AP04731 61 aa1.4□□□□□ -2.18
SNCA-213ENST00000618500 COA5Q86WW8 74 aa1.39□□□□□ -2.19
SNCA-213ENST00000618500 KRTAP12-3P60328 96 aa1.37□□□□□ -2.19
SNCA-213ENST00000618500 SPATA8Q6RVD6 105 aa1.37□□□□□ -2.19
SNCA-213ENST00000618500 TNP1P09430 55 aa1.37□□□□□ -2.19
SNCA-213ENST00000618500 KRTAP12-1P59990 96 aa1.37□□□□□ -2.19
SNCA-213ENST00000618500 UQCR11O14957 56 aa1.36□□□□□ -2.19
SNCA-213ENST00000618500 KRTAP6-1Q3LI64 71 aa1.34□□□□□ -2.2
SNCA-213ENST00000618500 A0A1B0GU69 56 aa1.33□□□□□ -2.2
SNCA-213ENST00000618500 KRTAP6-2Q3LI66 62 aa1.31□□□□□ -2.2
SNCA-213ENST00000618500 SYNE1Q8NF91 8797 aaKnown RBP1.3□□□□□ -2.2
SNCA-213ENST00000618500 LCE3DQ9BYE3 92 aa1.29□□□□□ -2.2
SNCA-213ENST00000618500 INE1O15225 51 aa1.23□□□□□ -2.21
SNCA-213ENST00000618500 LCE1CQ5T751 118 aa1.21□□□□□ -2.22
SNCA-213ENST00000618500 LCE1BQ5T7P3 118 aa1.21□□□□□ -2.22
SNCA-213ENST00000618500 MUC19Q7Z5P9 8384 aa1.1□□□□□ -2.23
SNCA-213ENST00000618500 PHGR1C9JFL3 82 aa1.05□□□□□ -2.24
SNCA-213ENST00000618500 KRTAP21-2Q3LI59 83 aa0.92□□□□□ -2.26
SNCA-213ENST00000618500 KRTAP21-1Q3LI58 79 aa0.88□□□□□ -2.27
SNCA-213ENST00000618500 PRM1P04553 51 aa0.73□□□□□ -2.29
SNCA-213ENST00000618500 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 58.9 ms