RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 MDN1Q9NU22 5596 aa3.46□□□□□ -1.86
PSMB3-208ENST00000613870 MT1XP80297 61 aa3.46□□□□□ -1.86
PSMB3-208ENST00000613870 C10orf95Q9H7T3 257 aa3.45□□□□□ -1.86
PSMB3-208ENST00000613870 LCE4AQ5TA78 99 aa3.44□□□□□ -1.86
PSMB3-208ENST00000613870 NEBP20929 6669 aa3.43□□□□□ -1.86
PSMB3-208ENST00000613870 TNP1P09430 55 aa3.42□□□□□ -1.86
PSMB3-208ENST00000613870 KRTAP5-9P26371 169 aa3.4□□□□□ -1.87
PSMB3-208ENST00000613870 LCE5AQ5TCM9 118 aa3.38□□□□□ -1.87
PSMB3-208ENST00000613870 KRTAP10-7P60409 375 aaPredicted RBP3.33□□□□□ -1.88
PSMB3-208ENST00000613870 KRTAP10-12P60413 245 aa3.31□□□□□ -1.88
PSMB3-208ENST00000613870 KRTAP20-1Q3LI63 56 aa3.3□□□□□ -1.88
PSMB3-208ENST00000613870 SPRR2FQ96RM1 72 aa3.27□□□□□ -1.89
PSMB3-208ENST00000613870 LCE3AQ5TA76 89 aa3.26□□□□□ -1.89
PSMB3-208ENST00000613870 KRTAP8-1Q8IUC2 63 aa3.25□□□□□ -1.89
PSMB3-208ENST00000613870 NDUFAF8A1L188 74 aa3.24□□□□□ -1.89
PSMB3-208ENST00000613870 KRTAP15-1Q3LI76 137 aa3.24□□□□□ -1.89
PSMB3-208ENST00000613870 PP632Q6XCG6 107 aa3.24□□□□□ -1.89
PSMB3-208ENST00000613870 SPRR2EP22531 72 aa3.23□□□□□ -1.89
PSMB3-208ENST00000613870 SPRR2BP35325 72 aa3.23□□□□□ -1.89
PSMB3-208ENST00000613870 SPRR2AP35326 72 aa3.23□□□□□ -1.89
PSMB3-208ENST00000613870 KRTAP2-3P0C7H8 128 aa3.22□□□□□ -1.89
PSMB3-208ENST00000613870 KRTAP2-4Q9BYR9 128 aa3.22□□□□□ -1.89
PSMB3-208ENST00000613870 LCE1AQ5T7P2 110 aa3.2□□□□□ -1.9
PSMB3-208ENST00000613870 KRTAP19-5Q3LI72 72 aa3.15□□□□□ -1.91
PSMB3-208ENST00000613870 KRTAP12-3P60328 96 aa3.14□□□□□ -1.91
PSMB3-208ENST00000613870 SPRR2DP22532 72 aa3.12□□□□□ -1.91
PSMB3-208ENST00000613870 KRTAP2-2Q9BYT5 123 aa3.12□□□□□ -1.91
PSMB3-208ENST00000613870 KRTAP2-1Q9BYU5 128 aa3.12□□□□□ -1.91
PSMB3-208ENST00000613870 KRTAP19-7Q3SYF9 63 aa3.07□□□□□ -1.92
PSMB3-208ENST00000613870 MT1EP04732 61 aa3.05□□□□□ -1.92
PSMB3-208ENST00000613870 DSTQ03001 7570 aaKnown RBP2.99□□□□□ -1.93
PSMB3-208ENST00000613870 MT1LQ93083 61 aa2.98□□□□□ -1.93
PSMB3-208ENST00000613870 KRTAP19-4Q3LI73 84 aa2.97□□□□□ -1.93
PSMB3-208ENST00000613870 KRTAP19-3Q7Z4W3 81 aa2.96□□□□□ -1.94
PSMB3-208ENST00000613870 MT1GP13640 62 aa2.93□□□□□ -1.94
PSMB3-208ENST00000613870 LCE3CQ5T5A8 94 aa2.91□□□□□ -1.94
PSMB3-208ENST00000613870 MT1MQ8N339 61 aa2.89□□□□□ -1.95
PSMB3-208ENST00000613870 GPR98Q8WXG9 6306 aa2.88□□□□□ -1.95
PSMB3-208ENST00000613870 SPRR5A0A1B0GTR4 108 aa2.86□□□□□ -1.95
PSMB3-208ENST00000613870 KRTAP4-3Q9BYR4 195 aa2.84□□□□□ -1.95
PSMB3-208ENST00000613870 INE1O15225 51 aa2.81□□□□□ -1.96
PSMB3-208ENST00000613870 HMCN1Q96RW7 5635 aa2.79□□□□□ -1.96
PSMB3-208ENST00000613870 MT4P47944 62 aa2.74□□□□□ -1.97
PSMB3-208ENST00000613870 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
PSMB3-208ENST00000613870 KRTAP5-4Q6L8H1 288 aa2.72□□□□□ -1.97
PSMB3-208ENST00000613870 AHNAK2Q8IVF2 5795 aa2.7□□□□□ -1.98
PSMB3-208ENST00000613870 KRTAP9-6A8MVA2 160 aa2.7□□□□□ -1.98
PSMB3-208ENST00000613870 KRTAP5-5Q701N2 237 aaPredicted RBP2.62□□□□□ -1.99
PSMB3-208ENST00000613870 KRTAP5-10Q6L8G5 202 aa2.6□□□□□ -1.99
PSMB3-208ENST00000613870 KRTAP20-2Q3LI61 65 aa2.57□□□□□ -2
PSMB3-208ENST00000613870 SYNE1Q8NF91 8797 aaKnown RBP2.56□□□□□ -2
PSMB3-208ENST00000613870 MT1AP04731 61 aa2.54□□□□□ -2
PSMB3-208ENST00000613870 KRTAP12-4P60329 112 aa2.52□□□□□ -2.01
PSMB3-208ENST00000613870 KRTAP6-1Q3LI64 71 aa2.51□□□□□ -2.01
PSMB3-208ENST00000613870 KRTAP5-11Q6L8G4 156 aa2.5□□□□□ -2.01
PSMB3-208ENST00000613870 KRTAP5-7Q6L8G8 165 aa2.49□□□□□ -2.01
PSMB3-208ENST00000613870 KRTAP5-2Q701N4 177 aa2.38□□□□□ -2.03
PSMB3-208ENST00000613870 KRTAP6-2Q3LI66 62 aa2.35□□□□□ -2.03
PSMB3-208ENST00000613870 MT3P25713 68 aa2.33□□□□□ -2.04
PSMB3-208ENST00000613870 KRTAP5-1Q6L8H4 278 aa2.33□□□□□ -2.04
PSMB3-208ENST00000613870 KRTAP5-8O75690 187 aa2.28□□□□□ -2.04
PSMB3-208ENST00000613870 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
PSMB3-208ENST00000613870 OBSCNQ5VST9 7968 aa2.27□□□□□ -2.05
PSMB3-208ENST00000613870 MUC5BQ9HC84 5762 aaPredicted RBP2.25□□□□□ -2.05
PSMB3-208ENST00000613870 AHNAKQ09666 5890 aaKnown RBP2.22□□□□□ -2.05
PSMB3-208ENST00000613870 MUC5ACP98088 5654 aa2.2□□□□□ -2.06
PSMB3-208ENST00000613870 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
PSMB3-208ENST00000613870 LCE1EQ5T753 118 aa2.14□□□□□ -2.07
PSMB3-208ENST00000613870 LCE1FQ5T754 118 aa2.12□□□□□ -2.07
PSMB3-208ENST00000613870 LCE3EQ5T5B0 92 aa2.11□□□□□ -2.07
PSMB3-208ENST00000613870 LCE1BQ5T7P3 118 aa1.96□□□□□ -2.1
PSMB3-208ENST00000613870 LCE1CQ5T751 118 aa1.89□□□□□ -2.11
PSMB3-208ENST00000613870 PRM1P04553 51 aa1.81□□□□□ -2.12
PSMB3-208ENST00000613870 KRTAP21-2Q3LI59 83 aa1.61□□□□□ -2.15
PSMB3-208ENST00000613870 PHGR1C9JFL3 82 aa1.51□□□□□ -2.17
PSMB3-208ENST00000613870 MUC19Q7Z5P9 8384 aa1.39□□□□□ -2.19
PSMB3-208ENST00000613870 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
PSMB3-208ENST00000613870 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 52.9 ms