RNA–Protein interactions for RNA: ENST00000609774.1

LMBR1-221, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-221ENST00000609774 CAMK2N1Q7Z7J9 78 aa3.5□□□□□ -1.85
LMBR1-221ENST00000609774 KRTAP19-6Q3LI70 58 aa3.48□□□□□ -1.85
LMBR1-221ENST00000609774 A0A0A0MQY5 61 aa3.47□□□□□ -1.85
LMBR1-221ENST00000609774 MT2AP02795 61 aa3.44□□□□□ -1.86
LMBR1-221ENST00000609774 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
LMBR1-221ENST00000609774 MT1FP04733 61 aa3.41□□□□□ -1.86
LMBR1-221ENST00000609774 TNP1P09430 55 aa3.41□□□□□ -1.86
LMBR1-221ENST00000609774 MUC12Q9UKN1 5478 aa3.36□□□□□ -1.87
LMBR1-221ENST00000609774 KRTAP20-1Q3LI63 56 aa3.35□□□□□ -1.87
LMBR1-221ENST00000609774 KRTAP10-10P60014 251 aa3.34□□□□□ -1.87
LMBR1-221ENST00000609774 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
LMBR1-221ENST00000609774 SPRR5A0A1B0GTR4 108 aa3.27□□□□□ -1.89
LMBR1-221ENST00000609774 KRTAP5-9P26371 169 aa3.26□□□□□ -1.89
LMBR1-221ENST00000609774 MDN1Q9NU22 5596 aa3.22□□□□□ -1.89
LMBR1-221ENST00000609774 KMT2DO14686 5537 aa3.22□□□□□ -1.89
LMBR1-221ENST00000609774 KRTAP2-3P0C7H8 128 aa3.22□□□□□ -1.89
LMBR1-221ENST00000609774 KRTAP2-4Q9BYR9 128 aa3.22□□□□□ -1.89
LMBR1-221ENST00000609774 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
LMBR1-221ENST00000609774 SPRR2GQ9BYE4 73 aa3.18□□□□□ -1.9
LMBR1-221ENST00000609774 KRTAP10-5P60370 271 aa3.16□□□□□ -1.9
LMBR1-221ENST00000609774 KRTAP5-4Q6L8H1 288 aa3.15□□□□□ -1.91
LMBR1-221ENST00000609774 INE1O15225 51 aa3.14□□□□□ -1.91
LMBR1-221ENST00000609774 PRO2289Q9P1D8 64 aa3.11□□□□□ -1.91
LMBR1-221ENST00000609774 KRTAP2-1Q9BYU5 128 aa3.1□□□□□ -1.91
LMBR1-221ENST00000609774 KRTAP9-6A8MVA2 160 aa3.07□□□□□ -1.92
LMBR1-221ENST00000609774 MT1BP07438 61 aa3.07□□□□□ -1.92
LMBR1-221ENST00000609774 LCE3AQ5TA76 89 aa3.07□□□□□ -1.92
LMBR1-221ENST00000609774 KRTAP8-1Q8IUC2 63 aa3.07□□□□□ -1.92
LMBR1-221ENST00000609774 GPR98Q8WXG9 6306 aa3.06□□□□□ -1.92
LMBR1-221ENST00000609774 KRTAP19-8Q3LI54 63 aa3.05□□□□□ -1.92
LMBR1-221ENST00000609774 MT3P25713 68 aa3.03□□□□□ -1.92
LMBR1-221ENST00000609774 SPRR2EP22531 72 aa2.99□□□□□ -1.93
LMBR1-221ENST00000609774 SPRR2BP35325 72 aa2.99□□□□□ -1.93
LMBR1-221ENST00000609774 SPRR2AP35326 72 aa2.99□□□□□ -1.93
LMBR1-221ENST00000609774 KRTAP12-3P60328 96 aa2.98□□□□□ -1.93
LMBR1-221ENST00000609774 KRTAP10-12P60413 245 aa2.97□□□□□ -1.93
LMBR1-221ENST00000609774 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
LMBR1-221ENST00000609774 SPRR2FQ96RM1 72 aa2.96□□□□□ -1.94
LMBR1-221ENST00000609774 MT1XP80297 61 aa2.91□□□□□ -1.94
LMBR1-221ENST00000609774 SPRR2DP22532 72 aa2.9□□□□□ -1.95
LMBR1-221ENST00000609774 DSTQ03001 7570 aaKnown RBP2.85□□□□□ -1.95
LMBR1-221ENST00000609774 OBSCNQ5VST9 7968 aa2.84□□□□□ -1.95
LMBR1-221ENST00000609774 LCE3CQ5T5A8 94 aa2.83□□□□□ -1.96
LMBR1-221ENST00000609774 KRTAP4-3Q9BYR4 195 aa2.78□□□□□ -1.96
LMBR1-221ENST00000609774 KRTAP19-5Q3LI72 72 aa2.75□□□□□ -1.97
LMBR1-221ENST00000609774 HMCN1Q96RW7 5635 aa2.72□□□□□ -1.97
LMBR1-221ENST00000609774 KRTAP5-10Q6L8G5 202 aa2.69□□□□□ -1.98
LMBR1-221ENST00000609774 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
LMBR1-221ENST00000609774 AHNAK2Q8IVF2 5795 aa2.68□□□□□ -1.98
LMBR1-221ENST00000609774 KRTAP5-7Q6L8G8 165 aa2.64□□□□□ -1.99
LMBR1-221ENST00000609774 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
LMBR1-221ENST00000609774 KRTAP19-7Q3SYF9 63 aa2.57□□□□□ -2
LMBR1-221ENST00000609774 KRTAP19-3Q7Z4W3 81 aa2.55□□□□□ -2
LMBR1-221ENST00000609774 MT1LQ93083 61 aa2.55□□□□□ -2
LMBR1-221ENST00000609774 MT1EP04732 61 aa2.53□□□□□ -2
LMBR1-221ENST00000609774 MT4P47944 62 aa2.52□□□□□ -2.01
LMBR1-221ENST00000609774 MT1GP13640 62 aa2.47□□□□□ -2.01
LMBR1-221ENST00000609774 KRTAP5-5Q701N2 237 aaPredicted RBP2.42□□□□□ -2.02
LMBR1-221ENST00000609774 MT1MQ8N339 61 aa2.39□□□□□ -2.03
LMBR1-221ENST00000609774 KRTAP12-4P60329 112 aa2.37□□□□□ -2.03
LMBR1-221ENST00000609774 KRTAP20-2Q3LI61 65 aa2.37□□□□□ -2.03
LMBR1-221ENST00000609774 AHNAKQ09666 5890 aaKnown RBP2.35□□□□□ -2.03
LMBR1-221ENST00000609774 MUC5ACP98088 5654 aa2.31□□□□□ -2.04
LMBR1-221ENST00000609774 MT1AP04731 61 aa2.3□□□□□ -2.04
LMBR1-221ENST00000609774 MUC5BQ9HC84 5762 aaPredicted RBP2.28□□□□□ -2.05
LMBR1-221ENST00000609774 LCE1CQ5T751 118 aa2.24□□□□□ -2.05
LMBR1-221ENST00000609774 LCE1BQ5T7P3 118 aa2.24□□□□□ -2.05
LMBR1-221ENST00000609774 LCE3DQ9BYE3 92 aa2.2□□□□□ -2.06
LMBR1-221ENST00000609774 SYNE1Q8NF91 8797 aaKnown RBP2.19□□□□□ -2.06
LMBR1-221ENST00000609774 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
LMBR1-221ENST00000609774 KRTAP6-1Q3LI64 71 aa2.12□□□□□ -2.07
LMBR1-221ENST00000609774 PRM1P04553 51 aa2.09□□□□□ -2.07
LMBR1-221ENST00000609774 KRTAP6-2Q3LI66 62 aa1.98□□□□□ -2.09
LMBR1-221ENST00000609774 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
LMBR1-221ENST00000609774 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
LMBR1-221ENST00000609774 PHGR1C9JFL3 82 aa1.53□□□□□ -2.16
LMBR1-221ENST00000609774 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
LMBR1-221ENST00000609774 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 226.7 ms