RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 A8MU10 97 aa5.18□□□□□ -1.58
CTSA-218ENST00000607814 K7ERS5 55 aa5.14□□□□□ -1.59
CTSA-218ENST00000607814 LCE1DQ5T752 114 aa5.14□□□□□ -1.59
CTSA-218ENST00000607814 LCE5AQ5TCM9 118 aa5.14□□□□□ -1.59
CTSA-218ENST00000607814 AHNAK2Q8IVF2 5795 aa5.12□□□□□ -1.59
CTSA-218ENST00000607814 KRTAP19-7Q3SYF9 63 aa5.1□□□□□ -1.59
CTSA-218ENST00000607814 PMAIP1Q13794 54 aa5.05□□□□□ -1.6
CTSA-218ENST00000607814 KRTAP19-3Q7Z4W3 81 aa5.05□□□□□ -1.6
CTSA-218ENST00000607814 MT1EP04732 61 aa5.04□□□□□ -1.6
CTSA-218ENST00000607814 LCE4AQ5TA78 99 aa5.04□□□□□ -1.6
CTSA-218ENST00000607814 KRTAP5-10Q6L8G5 202 aa5.03□□□□□ -1.6
CTSA-218ENST00000607814 KRTAP19-5Q3LI72 72 aa5.02□□□□□ -1.61
CTSA-218ENST00000607814 C10orf95Q9H7T3 257 aa5□□□□□ -1.61
CTSA-218ENST00000607814 MT4P47944 62 aa4.99□□□□□ -1.61
CTSA-218ENST00000607814 LCE3AQ5TA76 89 aa4.92□□□□□ -1.62
CTSA-218ENST00000607814 KTN1-AS1Q86SY8 53 aa4.92□□□□□ -1.62
CTSA-218ENST00000607814 KRTAP5-7Q6L8G8 165 aa4.91□□□□□ -1.62
CTSA-218ENST00000607814 TNP1P09430 55 aa4.89□□□□□ -1.63
CTSA-218ENST00000607814 MT1GP13640 62 aa4.89□□□□□ -1.63
CTSA-218ENST00000607814 PP632Q6XCG6 107 aa4.87□□□□□ -1.63
CTSA-218ENST00000607814 KRTAP5-4Q6L8H1 288 aa4.86□□□□□ -1.63
CTSA-218ENST00000607814 ROMO1P60602 79 aa4.84□□□□□ -1.63
CTSA-218ENST00000607814 MT1LQ93083 61 aa4.83□□□□□ -1.64
CTSA-218ENST00000607814 KRTAP4-6Q9BYQ5 205 aa4.81□□□□□ -1.64
CTSA-218ENST00000607814 MT1MQ8N339 61 aa4.8□□□□□ -1.64
CTSA-218ENST00000607814 KRTAP5-3Q6L8H2 238 aa4.79□□□□□ -1.64
CTSA-218ENST00000607814 KRTAP4-3Q9BYR4 195 aa4.79□□□□□ -1.64
CTSA-218ENST00000607814 KRTAP25-1Q3LHN0 102 aa4.76□□□□□ -1.65
CTSA-218ENST00000607814 KRTAP4-7Q9BYR0 210 aa4.7□□□□□ -1.66
CTSA-218ENST00000607814 KRTAP12-3P60328 96 aa4.69□□□□□ -1.66
CTSA-218ENST00000607814 SPRR5A0A1B0GTR4 108 aa4.66□□□□□ -1.66
CTSA-218ENST00000607814 KRTAP23-1A1A580 65 aa4.65□□□□□ -1.67
CTSA-218ENST00000607814 KRTAP20-2Q3LI61 65 aa4.6□□□□□ -1.67
CTSA-218ENST00000607814 PRAC1Q96KF2 57 aa4.51□□□□□ -1.69
CTSA-218ENST00000607814 KRTAP12-4P60329 112 aa4.47□□□□□ -1.69
CTSA-218ENST00000607814 LOC100996750A0A140TA64 210 aa4.45□□□□□ -1.7
CTSA-218ENST00000607814 KRTAP5-5Q701N2 237 aaPredicted RBP4.44□□□□□ -1.7
CTSA-218ENST00000607814 AHNAKQ09666 5890 aaKnown RBP4.41□□□□□ -1.7
CTSA-218ENST00000607814 KRTAP15-1Q3LI76 137 aa4.4□□□□□ -1.71
CTSA-218ENST00000607814 KRTAP19-4Q3LI73 84 aa4.38□□□□□ -1.71
CTSA-218ENST00000607814 SYNE1Q8NF91 8797 aaKnown RBP4.38□□□□□ -1.71
CTSA-218ENST00000607814 MUC5BQ9HC84 5762 aaPredicted RBP4.35□□□□□ -1.71
CTSA-218ENST00000607814 MUC5ACP98088 5654 aa4.33□□□□□ -1.72
CTSA-218ENST00000607814 LCE3CQ5T5A8 94 aa4.33□□□□□ -1.72
CTSA-218ENST00000607814 KRTAP4-11Q9BYQ6 195 aa4.33□□□□□ -1.72
CTSA-218ENST00000607814 KRTAP5-8O75690 187 aa4.18□□□□□ -1.74
CTSA-218ENST00000607814 KRTAP5-2Q701N4 177 aa4.17□□□□□ -1.74
CTSA-218ENST00000607814 KRTAP9-6A8MVA2 160 aa4.14□□□□□ -1.75
CTSA-218ENST00000607814 KRTAP6-1Q3LI64 71 aa4.12□□□□□ -1.75
CTSA-218ENST00000607814 MT1AP04731 61 aa4.09□□□□□ -1.75
CTSA-218ENST00000607814 KRTAP9-9Q9BYP9 154 aa4.07□□□□□ -1.76
CTSA-218ENST00000607814 OBSCNQ5VST9 7968 aa4.04□□□□□ -1.76
CTSA-218ENST00000607814 KRTAP9-4Q9BYQ2 154 aa3.96□□□□□ -1.78
CTSA-218ENST00000607814 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
CTSA-218ENST00000607814 LUZP6Q538Z0 58 aa3.91□□□□□ -1.78
CTSA-218ENST00000607814 KRTAP5-1Q6L8H4 278 aa3.82□□□□□ -1.8
CTSA-218ENST00000607814 NDUFAF8A1L188 74 aa3.81□□□□□ -1.8
CTSA-218ENST00000607814 H3BS24 57 aa3.77□□□□□ -1.81
CTSA-218ENST00000607814 MT3P25713 68 aa3.73□□□□□ -1.81
CTSA-218ENST00000607814 A0A0A0MQY5 61 aa3.61□□□□□ -1.83
CTSA-218ENST00000607814 LCE1EQ5T753 118 aa3.53□□□□□ -1.84
CTSA-218ENST00000607814 INE1O15225 51 aa3.35□□□□□ -1.87
CTSA-218ENST00000607814 KRTAP4-2Q9BYR5 136 aa3.33□□□□□ -1.88
CTSA-218ENST00000607814 LCE1BQ5T7P3 118 aa3.29□□□□□ -1.88
CTSA-218ENST00000607814 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
CTSA-218ENST00000607814 KRTAP4-12Q9BQ66 201 aa3.13□□□□□ -1.91
CTSA-218ENST00000607814 LCE3DQ9BYE3 92 aa3.12□□□□□ -1.91
CTSA-218ENST00000607814 KRTAP5-11Q6L8G4 156 aa3.07□□□□□ -1.92
CTSA-218ENST00000607814 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
CTSA-218ENST00000607814 LCE3EQ5T5B0 92 aa2.97□□□□□ -1.93
CTSA-218ENST00000607814 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
CTSA-218ENST00000607814 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
CTSA-218ENST00000607814 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
CTSA-218ENST00000607814 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
CTSA-218ENST00000607814 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
CTSA-218ENST00000607814 PRM1P04553 51 aa2.47□□□□□ -2.01
CTSA-218ENST00000607814 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
CTSA-218ENST00000607814 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 481.6 ms