RNA–Protein interactions for RNA: ENST00000606426.1

CUX2P1-201, Transcript of cut like homeobox 2 pseudogene 1, humanhuman

BASIC

Gene CUX2P1, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2P1-201ENST00000606426 NEBP20929 6669 aa2.84□□□□□ -1.96
CUX2P1-201ENST00000606426 SPRR2EP22531 72 aa2.81□□□□□ -1.96
CUX2P1-201ENST00000606426 SPRR2BP35325 72 aa2.81□□□□□ -1.96
CUX2P1-201ENST00000606426 SPRR2AP35326 72 aa2.81□□□□□ -1.96
CUX2P1-201ENST00000606426 ROMO1P60602 79 aa2.8□□□□□ -1.96
CUX2P1-201ENST00000606426 KRTAP19-7Q3SYF9 63 aa2.79□□□□□ -1.96
CUX2P1-201ENST00000606426 LCE1AQ5T7P2 110 aa2.79□□□□□ -1.96
CUX2P1-201ENST00000606426 LCE3AQ5TA76 89 aa2.79□□□□□ -1.96
CUX2P1-201ENST00000606426 KRTAP23-1A1A580 65 aa2.78□□□□□ -1.96
CUX2P1-201ENST00000606426 MT1EP04732 61 aa2.77□□□□□ -1.97
CUX2P1-201ENST00000606426 KRTAP19-5Q3LI72 72 aa2.77□□□□□ -1.97
CUX2P1-201ENST00000606426 BRK1Q8WUW1 75 aa2.77□□□□□ -1.97
CUX2P1-201ENST00000606426 SPRR2DP22532 72 aa2.73□□□□□ -1.97
CUX2P1-201ENST00000606426 PP632Q6XCG6 107 aa2.73□□□□□ -1.97
CUX2P1-201ENST00000606426 KRTAP19-3Q7Z4W3 81 aa2.73□□□□□ -1.97
CUX2P1-201ENST00000606426 KRTAP12-3P60328 96 aa2.71□□□□□ -1.98
CUX2P1-201ENST00000606426 KRTAP20-1Q3LI63 56 aa2.71□□□□□ -1.98
CUX2P1-201ENST00000606426 KRTAP5-3Q6L8H2 238 aa2.71□□□□□ -1.98
CUX2P1-201ENST00000606426 KRTAP2-3P0C7H8 128 aa2.7□□□□□ -1.98
CUX2P1-201ENST00000606426 MT1GP13640 62 aa2.7□□□□□ -1.98
CUX2P1-201ENST00000606426 KRTAP2-4Q9BYR9 128 aa2.7□□□□□ -1.98
CUX2P1-201ENST00000606426 MT1LQ93083 61 aa2.67□□□□□ -1.98
CUX2P1-201ENST00000606426 KRTAP2-2Q9BYT5 123 aa2.63□□□□□ -1.99
CUX2P1-201ENST00000606426 KRTAP2-1Q9BYU5 128 aa2.63□□□□□ -1.99
CUX2P1-201ENST00000606426 PMAIP1Q13794 54 aa2.62□□□□□ -1.99
CUX2P1-201ENST00000606426 MT1MQ8N339 61 aa2.62□□□□□ -1.99
CUX2P1-201ENST00000606426 KRTAP15-1Q3LI76 137 aa2.61□□□□□ -1.99
CUX2P1-201ENST00000606426 PRO0628Q9UI54 55 aa2.6□□□□□ -1.99
CUX2P1-201ENST00000606426 DSTQ03001 7570 aaKnown RBP2.53□□□□□ -2
CUX2P1-201ENST00000606426 LCE3CQ5T5A8 94 aa2.52□□□□□ -2.01
CUX2P1-201ENST00000606426 KRTAP4-3Q9BYR4 195 aa2.5□□□□□ -2.01
CUX2P1-201ENST00000606426 KTN1-AS1Q86SY8 53 aa2.44□□□□□ -2.02
CUX2P1-201ENST00000606426 PRAC1Q96KF2 57 aa2.43□□□□□ -2.02
CUX2P1-201ENST00000606426 KRTAP5-4Q6L8H1 288 aa2.4□□□□□ -2.03
CUX2P1-201ENST00000606426 KRTAP5-5Q701N2 237 aaPredicted RBP2.38□□□□□ -2.03
CUX2P1-201ENST00000606426 MT4P47944 62 aa2.34□□□□□ -2.03
CUX2P1-201ENST00000606426 KRTAP12-4P60329 112 aa2.33□□□□□ -2.04
CUX2P1-201ENST00000606426 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
CUX2P1-201ENST00000606426 KRTAP9-6A8MVA2 160 aa2.31□□□□□ -2.04
CUX2P1-201ENST00000606426 SVIPQ8NHG7 77 aa2.31□□□□□ -2.04
CUX2P1-201ENST00000606426 SPRR5A0A1B0GTR4 108 aa2.3□□□□□ -2.04
CUX2P1-201ENST00000606426 MT1AP04731 61 aa2.29□□□□□ -2.04
CUX2P1-201ENST00000606426 KRTAP20-2Q3LI61 65 aa2.25□□□□□ -2.05
CUX2P1-201ENST00000606426 KRTAP6-1Q3LI64 71 aa2.24□□□□□ -2.05
CUX2P1-201ENST00000606426 SYNE1Q8NF91 8797 aaKnown RBP2.2□□□□□ -2.06
CUX2P1-201ENST00000606426 AHNAK2Q8IVF2 5795 aa2.15□□□□□ -2.07
CUX2P1-201ENST00000606426 GPR98Q8WXG9 6306 aa2.15□□□□□ -2.07
CUX2P1-201ENST00000606426 KRTAP5-2Q701N4 177 aa2.14□□□□□ -2.07
CUX2P1-201ENST00000606426 LUZP6Q538Z0 58 aa2.13□□□□□ -2.07
CUX2P1-201ENST00000606426 MT3P25713 68 aa2.11□□□□□ -2.07
CUX2P1-201ENST00000606426 KRTAP6-2Q3LI66 62 aa2.11□□□□□ -2.07
CUX2P1-201ENST00000606426 KRTAP5-10Q6L8G5 202 aa2.09□□□□□ -2.07
CUX2P1-201ENST00000606426 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.05□□□□□ -2.08
CUX2P1-201ENST00000606426 KRTAP5-11Q6L8G4 156 aa2.01□□□□□ -2.09
CUX2P1-201ENST00000606426 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
CUX2P1-201ENST00000606426 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
CUX2P1-201ENST00000606426 LCE1EQ5T753 118 aa1.92□□□□□ -2.1
CUX2P1-201ENST00000606426 OBSCNQ5VST9 7968 aa1.89□□□□□ -2.11
CUX2P1-201ENST00000606426 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
CUX2P1-201ENST00000606426 LCE3DQ9BYE3 92 aa1.86□□□□□ -2.11
CUX2P1-201ENST00000606426 NDUFAF8A1L188 74 aa1.82□□□□□ -2.12
CUX2P1-201ENST00000606426 MUC5ACP98088 5654 aa1.8□□□□□ -2.12
CUX2P1-201ENST00000606426 LCE3EQ5T5B0 92 aa1.78□□□□□ -2.12
CUX2P1-201ENST00000606426 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
CUX2P1-201ENST00000606426 LCE1CQ5T751 118 aa1.76□□□□□ -2.13
CUX2P1-201ENST00000606426 LCE1BQ5T7P3 118 aa1.76□□□□□ -2.13
CUX2P1-201ENST00000606426 AHNAKQ09666 5890 aaKnown RBP1.72□□□□□ -2.13
CUX2P1-201ENST00000606426 KRTAP4-4Q9BYR3 166 aa1.69□□□□□ -2.14
CUX2P1-201ENST00000606426 A0A0A0MQY5 61 aa1.6□□□□□ -2.15
CUX2P1-201ENST00000606426 LCE1FQ5T754 118 aa1.59□□□□□ -2.15
CUX2P1-201ENST00000606426 INE1O15225 51 aa1.55□□□□□ -2.16
CUX2P1-201ENST00000606426 KRTAP21-2Q3LI59 83 aa1.47□□□□□ -2.17
CUX2P1-201ENST00000606426 PRM1P04553 51 aa1.41□□□□□ -2.18
CUX2P1-201ENST00000606426 PHGR1C9JFL3 82 aa1.34□□□□□ -2.19
CUX2P1-201ENST00000606426 MUC19Q7Z5P9 8384 aa1.12□□□□□ -2.23
CUX2P1-201ENST00000606426 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
CUX2P1-201ENST00000606426 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 62.5 ms