RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 KRTAP4-4Q9BYR3 166 aa1.41□□□□□ -2.18
VCAM1-205ENST00000603679 H0YAA0 97 aa1.41□□□□□ -2.18
VCAM1-205ENST00000603679 KRTAP19-8Q3LI54 63 aa1.41□□□□□ -2.18
VCAM1-205ENST00000603679 LCE1FQ5T754 118 aa1.4□□□□□ -2.19
VCAM1-205ENST00000603679 KRTAP2-1Q9BYU5 128 aa1.39□□□□□ -2.19
VCAM1-205ENST00000603679 MMP24-AS1A0A0U1RRL7 71 aa1.39□□□□□ -2.19
VCAM1-205ENST00000603679 KRTAP12-2P59991 146 aa1.39□□□□□ -2.19
VCAM1-205ENST00000603679 MT1FP04733 61 aa1.38□□□□□ -2.19
VCAM1-205ENST00000603679 KRTAP12-1P59990 96 aa1.38□□□□□ -2.19
VCAM1-205ENST00000603679 KRTAP5-7Q6L8G8 165 aa1.38□□□□□ -2.19
VCAM1-205ENST00000603679 C9orf92A6NGG3 77 aa1.36□□□□□ -2.19
VCAM1-205ENST00000603679 KRTAP10-5P60370 271 aa1.36□□□□□ -2.19
VCAM1-205ENST00000603679 KRTAP13-4Q3LI77 160 aa1.36□□□□□ -2.19
VCAM1-205ENST00000603679 MACF1Q9UPN3 7388 aaKnown RBP1.36□□□□□ -2.19
VCAM1-205ENST00000603679 SPRR5A0A1B0GTR4 108 aa1.36□□□□□ -2.19
VCAM1-205ENST00000603679 COX6B2Q6YFQ2 88 aa1.36□□□□□ -2.19
VCAM1-205ENST00000603679 KMT2DO14686 5537 aa1.35□□□□□ -2.19
VCAM1-205ENST00000603679 OBSCNQ5VST9 7968 aa1.35□□□□□ -2.19
VCAM1-205ENST00000603679 S4R3F8 94 aa1.35□□□□□ -2.19
VCAM1-205ENST00000603679 KRTAP10-12P60413 245 aa1.34□□□□□ -2.19
VCAM1-205ENST00000603679 SPRR2GQ9BYE4 73 aa1.34□□□□□ -2.2
VCAM1-205ENST00000603679 KRTAP5-10Q6L8G5 202 aa1.32□□□□□ -2.2
VCAM1-205ENST00000603679 KRTAP5-4Q6L8H1 288 aa1.31□□□□□ -2.2
VCAM1-205ENST00000603679 MT1BP07438 61 aa1.3□□□□□ -2.2
VCAM1-205ENST00000603679 FSIP2Q5CZC0 6907 aa1.27□□□□□ -2.21
VCAM1-205ENST00000603679 KRTAP10-10P60014 251 aa1.27□□□□□ -2.21
VCAM1-205ENST00000603679 MUC12Q9UKN1 5478 aa1.27□□□□□ -2.21
VCAM1-205ENST00000603679 SYNE2Q8WXH0 6885 aaKnown RBP1.26□□□□□ -2.21
VCAM1-205ENST00000603679 M0QZ58 72 aa1.25□□□□□ -2.21
VCAM1-205ENST00000603679 LCE3CQ5T5A8 94 aa1.25□□□□□ -2.21
VCAM1-205ENST00000603679 AHNAK2Q8IVF2 5795 aa1.25□□□□□ -2.21
VCAM1-205ENST00000603679 MDN1Q9NU22 5596 aa1.22□□□□□ -2.21
VCAM1-205ENST00000603679 KRTAP5-2Q701N4 177 aa1.21□□□□□ -2.22
VCAM1-205ENST00000603679 TNP1P09430 55 aa1.19□□□□□ -2.22
VCAM1-205ENST00000603679 KRTAP10-7P60409 375 aaPredicted RBP1.19□□□□□ -2.22
VCAM1-205ENST00000603679 MT1XP80297 61 aa1.18□□□□□ -2.22
VCAM1-205ENST00000603679 LCE1EQ5T753 118 aa1.18□□□□□ -2.22
VCAM1-205ENST00000603679 MUC19Q7Z5P9 8384 aa1.18□□□□□ -2.22
VCAM1-205ENST00000603679 KRTAP4-3Q9BYR4 195 aa1.16□□□□□ -2.22
VCAM1-205ENST00000603679 SYNE1Q8NF91 8797 aaKnown RBP1.15□□□□□ -2.22
VCAM1-205ENST00000603679 SPRR2EP22531 72 aa1.15□□□□□ -2.23
VCAM1-205ENST00000603679 SPRR2BP35325 72 aa1.15□□□□□ -2.23
VCAM1-205ENST00000603679 SPRR2AP35326 72 aa1.15□□□□□ -2.23
VCAM1-205ENST00000603679 KRTAP5-5Q701N2 237 aaPredicted RBP1.15□□□□□ -2.23
VCAM1-205ENST00000603679 LCE3EQ5T5B0 92 aa1.15□□□□□ -2.23
VCAM1-205ENST00000603679 SPRR2DP22532 72 aa1.14□□□□□ -2.23
VCAM1-205ENST00000603679 M0R2T5 61 aa1.14□□□□□ -2.23
VCAM1-205ENST00000603679 KRTAP12-3P60328 96 aa1.14□□□□□ -2.23
VCAM1-205ENST00000603679 KRTAP5-11Q6L8G4 156 aa1.12□□□□□ -2.23
VCAM1-205ENST00000603679 KRTAP19-7Q3SYF9 63 aa1.1□□□□□ -2.23
VCAM1-205ENST00000603679 KRTAP5-8O75690 187 aa1.09□□□□□ -2.23
VCAM1-205ENST00000603679 LCE3DQ9BYE3 92 aa1.09□□□□□ -2.24
VCAM1-205ENST00000603679 MUC5ACP98088 5654 aa1.08□□□□□ -2.24
VCAM1-205ENST00000603679 KRTAP19-3Q7Z4W3 81 aa1.06□□□□□ -2.24
VCAM1-205ENST00000603679 SPRR2FQ96RM1 72 aa1.06□□□□□ -2.24
VCAM1-205ENST00000603679 MT1EP04732 61 aa1.05□□□□□ -2.24
VCAM1-205ENST00000603679 KRTAP8-1Q8IUC2 63 aa1.05□□□□□ -2.24
VCAM1-205ENST00000603679 MT1GP13640 62 aa1.05□□□□□ -2.24
VCAM1-205ENST00000603679 KRTAP20-2Q3LI61 65 aa1.05□□□□□ -2.24
VCAM1-205ENST00000603679 KRTAP12-4P60329 112 aa1.04□□□□□ -2.24
VCAM1-205ENST00000603679 KRTAP5-1Q6L8H4 278 aa1.04□□□□□ -2.24
VCAM1-205ENST00000603679 KRTAP9-6A8MVA2 160 aa1.02□□□□□ -2.25
VCAM1-205ENST00000603679 MT1MQ8N339 61 aa1.01□□□□□ -2.25
VCAM1-205ENST00000603679 MT1LQ93083 61 aa0.98□□□□□ -2.25
VCAM1-205ENST00000603679 KRTAP19-5Q3LI72 72 aa0.95□□□□□ -2.26
VCAM1-205ENST00000603679 DSTQ03001 7570 aaKnown RBP0.92□□□□□ -2.26
VCAM1-205ENST00000603679 LCE3AQ5TA76 89 aa0.91□□□□□ -2.26
VCAM1-205ENST00000603679 PRM1P04553 51 aa0.9□□□□□ -2.26
VCAM1-205ENST00000603679 MT1AP04731 61 aa0.87□□□□□ -2.27
VCAM1-205ENST00000603679 MT4P47944 62 aa0.84□□□□□ -2.28
VCAM1-205ENST00000603679 LCE1CQ5T751 118 aa0.84□□□□□ -2.28
VCAM1-205ENST00000603679 LCE1BQ5T7P3 118 aa0.84□□□□□ -2.28
VCAM1-205ENST00000603679 KRTAP6-1Q3LI64 71 aa0.78□□□□□ -2.28
VCAM1-205ENST00000603679 KRTAP6-2Q3LI66 62 aa0.7□□□□□ -2.3
VCAM1-205ENST00000603679 PHGR1C9JFL3 82 aa0.65□□□□□ -2.3
VCAM1-205ENST00000603679 KRTAP21-2Q3LI59 83 aa0.65□□□□□ -2.31
VCAM1-205ENST00000603679 KRTAP21-1Q3LI58 79 aa0.59□□□□□ -2.31
VCAM1-205ENST00000603679 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 63.4 ms