RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 SPRR2FQ96RM1 72 aa4.79□□□□□ -1.64
CHMP2A-206ENST00000600118 LCE3AQ5TA76 89 aa4.77□□□□□ -1.65
CHMP2A-206ENST00000600118 KRTAP19-7Q3SYF9 63 aa4.75□□□□□ -1.65
CHMP2A-206ENST00000600118 MDN1Q9NU22 5596 aa4.74□□□□□ -1.65
CHMP2A-206ENST00000600118 NEBP20929 6669 aa4.73□□□□□ -1.65
CHMP2A-206ENST00000600118 H3BS24 57 aa4.7□□□□□ -1.66
CHMP2A-206ENST00000600118 KRTAP19-5Q3LI72 72 aa4.7□□□□□ -1.66
CHMP2A-206ENST00000600118 KRTAP23-1A1A580 65 aa4.68□□□□□ -1.66
CHMP2A-206ENST00000600118 MT1EP04732 61 aa4.68□□□□□ -1.66
CHMP2A-206ENST00000600118 LCE1AQ5T7P2 110 aa4.66□□□□□ -1.66
CHMP2A-206ENST00000600118 SPRR2EP22531 72 aa4.63□□□□□ -1.67
CHMP2A-206ENST00000600118 SPRR2BP35325 72 aa4.63□□□□□ -1.67
CHMP2A-206ENST00000600118 SPRR2AP35326 72 aa4.63□□□□□ -1.67
CHMP2A-206ENST00000600118 KRTAP12-3P60328 96 aa4.59□□□□□ -1.67
CHMP2A-206ENST00000600118 PMAIP1Q13794 54 aa4.57□□□□□ -1.68
CHMP2A-206ENST00000600118 PP632Q6XCG6 107 aa4.57□□□□□ -1.68
CHMP2A-206ENST00000600118 PRO0628Q9UI54 55 aa4.57□□□□□ -1.68
CHMP2A-206ENST00000600118 KRTAP19-3Q7Z4W3 81 aa4.56□□□□□ -1.68
CHMP2A-206ENST00000600118 MT1LQ93083 61 aa4.54□□□□□ -1.68
CHMP2A-206ENST00000600118 MT1GP13640 62 aa4.49□□□□□ -1.69
CHMP2A-206ENST00000600118 SPRR2DP22532 72 aa4.47□□□□□ -1.69
CHMP2A-206ENST00000600118 KRTAP15-1Q3LI76 137 aa4.42□□□□□ -1.7
CHMP2A-206ENST00000600118 MT1MQ8N339 61 aa4.42□□□□□ -1.7
CHMP2A-206ENST00000600118 KRTAP20-1Q3LI63 56 aa4.39□□□□□ -1.71
CHMP2A-206ENST00000600118 KRTAP2-3P0C7H8 128 aa4.38□□□□□ -1.71
CHMP2A-206ENST00000600118 KRTAP2-4Q9BYR9 128 aa4.38□□□□□ -1.71
CHMP2A-206ENST00000600118 PRAC1Q96KF2 57 aa4.33□□□□□ -1.72
CHMP2A-206ENST00000600118 KRTAP4-3Q9BYR4 195 aa4.3□□□□□ -1.72
CHMP2A-206ENST00000600118 KTN1-AS1Q86SY8 53 aa4.28□□□□□ -1.72
CHMP2A-206ENST00000600118 KRTAP2-2Q9BYT5 123 aa4.27□□□□□ -1.73
CHMP2A-206ENST00000600118 KRTAP2-1Q9BYU5 128 aa4.27□□□□□ -1.73
CHMP2A-206ENST00000600118 LCE3CQ5T5A8 94 aa4.26□□□□□ -1.73
CHMP2A-206ENST00000600118 DSTQ03001 7570 aaKnown RBP4.22□□□□□ -1.73
CHMP2A-206ENST00000600118 SVIPQ8NHG7 77 aa4.13□□□□□ -1.75
CHMP2A-206ENST00000600118 KRTAP9-6A8MVA2 160 aa4.05□□□□□ -1.76
CHMP2A-206ENST00000600118 KRTAP5-5Q701N2 237 aaPredicted RBP4.05□□□□□ -1.76
CHMP2A-206ENST00000600118 KRTAP5-4Q6L8H1 288 aa4.03□□□□□ -1.76
CHMP2A-206ENST00000600118 SPRR5A0A1B0GTR4 108 aa3.94□□□□□ -1.78
CHMP2A-206ENST00000600118 MT4P47944 62 aa3.88□□□□□ -1.79
CHMP2A-206ENST00000600118 HMCN1Q96RW7 5635 aa3.86□□□□□ -1.79
CHMP2A-206ENST00000600118 MT1AP04731 61 aa3.86□□□□□ -1.79
CHMP2A-206ENST00000600118 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.79
CHMP2A-206ENST00000600118 KRTAP6-1Q3LI64 71 aa3.81□□□□□ -1.8
CHMP2A-206ENST00000600118 KRTAP12-4P60329 112 aa3.8□□□□□ -1.8
CHMP2A-206ENST00000600118 KRTAP20-2Q3LI61 65 aa3.75□□□□□ -1.81
CHMP2A-206ENST00000600118 GPR98Q8WXG9 6306 aa3.74□□□□□ -1.81
CHMP2A-206ENST00000600118 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.66□□□□□ -1.82
CHMP2A-206ENST00000600118 KRTAP5-2Q701N4 177 aa3.6□□□□□ -1.83
CHMP2A-206ENST00000600118 AHNAK2Q8IVF2 5795 aa3.58□□□□□ -1.84
CHMP2A-206ENST00000600118 KRTAP5-11Q6L8G4 156 aa3.57□□□□□ -1.84
CHMP2A-206ENST00000600118 KRTAP6-2Q3LI66 62 aa3.56□□□□□ -1.84
CHMP2A-206ENST00000600118 LUZP6Q538Z0 58 aa3.56□□□□□ -1.84
CHMP2A-206ENST00000600118 MT3P25713 68 aa3.5□□□□□ -1.85
CHMP2A-206ENST00000600118 KRTAP5-10Q6L8G5 202 aa3.46□□□□□ -1.86
CHMP2A-206ENST00000600118 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
CHMP2A-206ENST00000600118 KRTAP5-7Q6L8G8 165 aa3.26□□□□□ -1.89
CHMP2A-206ENST00000600118 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
CHMP2A-206ENST00000600118 KRTAP5-8O75690 187 aa3.23□□□□□ -1.89
CHMP2A-206ENST00000600118 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
CHMP2A-206ENST00000600118 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.91
CHMP2A-206ENST00000600118 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
CHMP2A-206ENST00000600118 MUC5ACP98088 5654 aa3.1□□□□□ -1.91
CHMP2A-206ENST00000600118 A0A0A0MQY5 61 aa3.07□□□□□ -1.92
CHMP2A-206ENST00000600118 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
CHMP2A-206ENST00000600118 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
CHMP2A-206ENST00000600118 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
CHMP2A-206ENST00000600118 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
CHMP2A-206ENST00000600118 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
CHMP2A-206ENST00000600118 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
CHMP2A-206ENST00000600118 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
CHMP2A-206ENST00000600118 INE1O15225 51 aa2.67□□□□□ -1.98
CHMP2A-206ENST00000600118 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
CHMP2A-206ENST00000600118 PRM1P04553 51 aa2.47□□□□□ -2.01
CHMP2A-206ENST00000600118 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
CHMP2A-206ENST00000600118 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
CHMP2A-206ENST00000600118 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
CHMP2A-206ENST00000600118 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 116 ms