RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 KRTAP5-10Q6L8G5 202 aa3.73□□□□□ -1.81
NOTCH3-202ENST00000595045 KRTAP19-7Q3SYF9 63 aa3.7□□□□□ -1.82
NOTCH3-202ENST00000595045 MT4P47944 62 aa3.69□□□□□ -1.82
NOTCH3-202ENST00000595045 LCE4AQ5TA78 99 aa3.66□□□□□ -1.82
NOTCH3-202ENST00000595045 MT1EP04732 61 aa3.65□□□□□ -1.83
NOTCH3-202ENST00000595045 KRTAP19-3Q7Z4W3 81 aa3.65□□□□□ -1.83
NOTCH3-202ENST00000595045 KRTAP13-4Q3LI77 160 aa3.64□□□□□ -1.83
NOTCH3-202ENST00000595045 KRTAP5-7Q6L8G8 165 aa3.64□□□□□ -1.83
NOTCH3-202ENST00000595045 CAMK2N1Q7Z7J9 78 aa3.63□□□□□ -1.83
NOTCH3-202ENST00000595045 PRAC1Q96KF2 57 aa3.63□□□□□ -1.83
NOTCH3-202ENST00000595045 K7ERS5 55 aa3.58□□□□□ -1.84
NOTCH3-202ENST00000595045 KRTAP25-1Q3LHN0 102 aa3.57□□□□□ -1.84
NOTCH3-202ENST00000595045 A0A0D9SG42 100 aa3.56□□□□□ -1.84
NOTCH3-202ENST00000595045 H3BS24 57 aa3.55□□□□□ -1.84
NOTCH3-202ENST00000595045 KRTAP4-6Q9BYQ5 205 aa3.55□□□□□ -1.84
NOTCH3-202ENST00000595045 KRTAP5-3Q6L8H2 238 aa3.54□□□□□ -1.84
NOTCH3-202ENST00000595045 KRTAP5-4Q6L8H1 288 aa3.53□□□□□ -1.84
NOTCH3-202ENST00000595045 A0A1B0GU33 70 aa3.52□□□□□ -1.85
NOTCH3-202ENST00000595045 SPINT4Q6UDR6 99 aa3.52□□□□□ -1.85
NOTCH3-202ENST00000595045 SPRR5A0A1B0GTR4 108 aa3.51□□□□□ -1.85
NOTCH3-202ENST00000595045 MT1GP13640 62 aa3.51□□□□□ -1.85
NOTCH3-202ENST00000595045 ROMO1P60602 79 aa3.51□□□□□ -1.85
NOTCH3-202ENST00000595045 KRTAP19-5Q3LI72 72 aa3.5□□□□□ -1.85
NOTCH3-202ENST00000595045 MT1MQ8N339 61 aa3.48□□□□□ -1.85
NOTCH3-202ENST00000595045 PP632Q6XCG6 107 aa3.47□□□□□ -1.85
NOTCH3-202ENST00000595045 KRTAP4-3Q9BYR4 195 aa3.46□□□□□ -1.86
NOTCH3-202ENST00000595045 MT1LQ93083 61 aa3.45□□□□□ -1.86
NOTCH3-202ENST00000595045 KRTAP12-1P59990 96 aa3.43□□□□□ -1.86
NOTCH3-202ENST00000595045 KRTAP20-2Q3LI61 65 aa3.37□□□□□ -1.87
NOTCH3-202ENST00000595045 LCE3AQ5TA76 89 aa3.33□□□□□ -1.88
NOTCH3-202ENST00000595045 C10orf95Q9H7T3 257 aa3.33□□□□□ -1.88
NOTCH3-202ENST00000595045 KRTAP4-7Q9BYR0 210 aa3.31□□□□□ -1.88
NOTCH3-202ENST00000595045 TNP1P09430 55 aa3.3□□□□□ -1.88
NOTCH3-202ENST00000595045 AHNAKQ09666 5890 aaKnown RBP3.29□□□□□ -1.88
NOTCH3-202ENST00000595045 KRTAP5-5Q701N2 237 aaPredicted RBP3.27□□□□□ -1.89
NOTCH3-202ENST00000595045 KRTAP15-1Q3LI76 137 aa3.26□□□□□ -1.89
NOTCH3-202ENST00000595045 SYNE1Q8NF91 8797 aaKnown RBP3.25□□□□□ -1.89
NOTCH3-202ENST00000595045 MUC5BQ9HC84 5762 aaPredicted RBP3.25□□□□□ -1.89
NOTCH3-202ENST00000595045 MUC5ACP98088 5654 aa3.23□□□□□ -1.89
NOTCH3-202ENST00000595045 KRTAP12-4P60329 112 aa3.22□□□□□ -1.89
NOTCH3-202ENST00000595045 KRTAP12-3P60328 96 aa3.18□□□□□ -1.9
NOTCH3-202ENST00000595045 NDUFAF8A1L188 74 aa3.17□□□□□ -1.9
NOTCH3-202ENST00000595045 KRTAP4-11Q9BYQ6 195 aa3.17□□□□□ -1.9
NOTCH3-202ENST00000595045 LOC100996750A0A140TA64 210 aa3.14□□□□□ -1.91
NOTCH3-202ENST00000595045 KRTAP5-8O75690 187 aa3.09□□□□□ -1.91
NOTCH3-202ENST00000595045 KRTAP23-1A1A580 65 aa3.05□□□□□ -1.92
NOTCH3-202ENST00000595045 A0A0A0MQY5 61 aa3.04□□□□□ -1.92
NOTCH3-202ENST00000595045 LUZP6Q538Z0 58 aa3.04□□□□□ -1.92
NOTCH3-202ENST00000595045 KRTAP5-2Q701N4 177 aa3.03□□□□□ -1.92
NOTCH3-202ENST00000595045 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
NOTCH3-202ENST00000595045 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
NOTCH3-202ENST00000595045 KRTAP6-1Q3LI64 71 aa2.94□□□□□ -1.94
NOTCH3-202ENST00000595045 LCE3CQ5T5A8 94 aa2.92□□□□□ -1.94
NOTCH3-202ENST00000595045 MT1AP04731 61 aa2.91□□□□□ -1.94
NOTCH3-202ENST00000595045 KRTAP19-4Q3LI73 84 aa2.91□□□□□ -1.94
NOTCH3-202ENST00000595045 KRTAP9-4Q9BYQ2 154 aa2.85□□□□□ -1.95
NOTCH3-202ENST00000595045 KRTAP6-2Q3LI66 62 aa2.84□□□□□ -1.95
NOTCH3-202ENST00000595045 KRTAP9-6A8MVA2 160 aa2.82□□□□□ -1.96
NOTCH3-202ENST00000595045 KRTAP5-1Q6L8H4 278 aa2.8□□□□□ -1.96
NOTCH3-202ENST00000595045 INE1O15225 51 aa2.79□□□□□ -1.96
NOTCH3-202ENST00000595045 MT3P25713 68 aa2.64□□□□□ -1.99
NOTCH3-202ENST00000595045 LCE1EQ5T753 118 aa2.52□□□□□ -2.01
NOTCH3-202ENST00000595045 KRTAP4-2Q9BYR5 136 aa2.45□□□□□ -2.02
NOTCH3-202ENST00000595045 LCE1BQ5T7P3 118 aa2.41□□□□□ -2.02
NOTCH3-202ENST00000595045 KRTAP4-12Q9BQ66 201 aa2.36□□□□□ -2.03
NOTCH3-202ENST00000595045 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
NOTCH3-202ENST00000595045 KRTAP5-11Q6L8G4 156 aa2.24□□□□□ -2.05
NOTCH3-202ENST00000595045 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
NOTCH3-202ENST00000595045 LCE1FQ5T754 118 aa2.17□□□□□ -2.06
NOTCH3-202ENST00000595045 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.12□□□□□ -2.07
NOTCH3-202ENST00000595045 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
NOTCH3-202ENST00000595045 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
NOTCH3-202ENST00000595045 LCE3EQ5T5B0 92 aa1.95□□□□□ -2.1
NOTCH3-202ENST00000595045 MUC19Q7Z5P9 8384 aa1.82□□□□□ -2.12
NOTCH3-202ENST00000595045 KRTAP4-4Q9BYR3 166 aa1.81□□□□□ -2.12
NOTCH3-202ENST00000595045 PRM1P04553 51 aa1.77□□□□□ -2.13
NOTCH3-202ENST00000595045 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
NOTCH3-202ENST00000595045 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 78.7 ms