RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 KRTAP19-3Q7Z4W3 81 aa4.96□□□□□ -1.62
APOC1-209ENST00000592885 A0A1B0GU33 70 aa4.92□□□□□ -1.62
APOC1-209ENST00000592885 A0A0D9SG42 100 aa4.9□□□□□ -1.63
APOC1-209ENST00000592885 UQCR11O14957 56 aa4.9□□□□□ -1.63
APOC1-209ENST00000592885 A6NED7 52 aa4.89□□□□□ -1.63
APOC1-209ENST00000592885 DSTQ03001 7570 aaKnown RBP4.88□□□□□ -1.63
APOC1-209ENST00000592885 SPATA8Q6RVD6 105 aa4.86□□□□□ -1.63
APOC1-209ENST00000592885 SPINT4Q6UDR6 99 aa4.86□□□□□ -1.63
APOC1-209ENST00000592885 MT1GP13640 62 aa4.84□□□□□ -1.63
APOC1-209ENST00000592885 MIR22HGQ0VDD5 57 aa4.84□□□□□ -1.63
APOC1-209ENST00000592885 KRTAP12-1P59990 96 aa4.82□□□□□ -1.64
APOC1-209ENST00000592885 PP632Q6XCG6 107 aa4.82□□□□□ -1.64
APOC1-209ENST00000592885 CDC42SE1Q9NRR8 79 aa4.82□□□□□ -1.64
APOC1-209ENST00000592885 KRTAP19-5Q3LI72 72 aa4.81□□□□□ -1.64
APOC1-209ENST00000592885 GPR98Q8WXG9 6306 aa4.79□□□□□ -1.64
APOC1-209ENST00000592885 BRK1Q8WUW1 75 aa4.79□□□□□ -1.64
APOC1-209ENST00000592885 A8MU10 97 aa4.75□□□□□ -1.65
APOC1-209ENST00000592885 MT1MQ8N339 61 aa4.73□□□□□ -1.65
APOC1-209ENST00000592885 MT1LQ93083 61 aa4.72□□□□□ -1.65
APOC1-209ENST00000592885 KRTAP15-1Q3LI76 137 aa4.7□□□□□ -1.66
APOC1-209ENST00000592885 PRO0628Q9UI54 55 aa4.7□□□□□ -1.66
APOC1-209ENST00000592885 TNP1P09430 55 aa4.67□□□□□ -1.66
APOC1-209ENST00000592885 LCE3AQ5TA76 89 aa4.65□□□□□ -1.67
APOC1-209ENST00000592885 C10orf95Q9H7T3 257 aa4.65□□□□□ -1.67
APOC1-209ENST00000592885 K7ERS5 55 aa4.63□□□□□ -1.67
APOC1-209ENST00000592885 MT4P47944 62 aa4.63□□□□□ -1.67
APOC1-209ENST00000592885 HMCN1Q96RW7 5635 aa4.61□□□□□ -1.67
APOC1-209ENST00000592885 KRTAP5-4Q6L8H1 288 aa4.61□□□□□ -1.67
APOC1-209ENST00000592885 KRTAP4-3Q9BYR4 195 aa4.56□□□□□ -1.68
APOC1-209ENST00000592885 PMAIP1Q13794 54 aa4.54□□□□□ -1.68
APOC1-209ENST00000592885 KRTAP12-3P60328 96 aa4.49□□□□□ -1.69
APOC1-209ENST00000592885 KRTAP5-10Q6L8G5 202 aa4.47□□□□□ -1.69
APOC1-209ENST00000592885 AHNAK2Q8IVF2 5795 aa4.46□□□□□ -1.7
APOC1-209ENST00000592885 ROMO1P60602 79 aa4.44□□□□□ -1.7
APOC1-209ENST00000592885 KRTAP25-1Q3LHN0 102 aa4.36□□□□□ -1.71
APOC1-209ENST00000592885 KRTAP5-5Q701N2 237 aaPredicted RBP4.36□□□□□ -1.71
APOC1-209ENST00000592885 SPRR5A0A1B0GTR4 108 aa4.35□□□□□ -1.71
APOC1-209ENST00000592885 KRTAP20-2Q3LI61 65 aa4.35□□□□□ -1.71
APOC1-209ENST00000592885 KTN1-AS1Q86SY8 53 aa4.35□□□□□ -1.71
APOC1-209ENST00000592885 KRTAP5-7Q6L8G8 165 aa4.34□□□□□ -1.71
APOC1-209ENST00000592885 KRTAP5-3Q6L8H2 238 aa4.34□□□□□ -1.71
APOC1-209ENST00000592885 KRTAP12-4P60329 112 aa4.29□□□□□ -1.72
APOC1-209ENST00000592885 PRAC1Q96KF2 57 aa4.25□□□□□ -1.73
APOC1-209ENST00000592885 SVIPQ8NHG7 77 aa4.18□□□□□ -1.74
APOC1-209ENST00000592885 SYNE1Q8NF91 8797 aaKnown RBP4.13□□□□□ -1.75
APOC1-209ENST00000592885 LCE3CQ5T5A8 94 aa4.12□□□□□ -1.75
APOC1-209ENST00000592885 MT1AP04731 61 aa4.03□□□□□ -1.76
APOC1-209ENST00000592885 KRTAP5-2Q701N4 177 aa4.02□□□□□ -1.77
APOC1-209ENST00000592885 KRTAP6-1Q3LI64 71 aa3.97□□□□□ -1.77
APOC1-209ENST00000592885 KRTAP5-8O75690 187 aa3.86□□□□□ -1.79
APOC1-209ENST00000592885 KRTAP9-6A8MVA2 160 aa3.85□□□□□ -1.79
APOC1-209ENST00000592885 KRTAP6-2Q3LI66 62 aa3.83□□□□□ -1.8
APOC1-209ENST00000592885 A0A0A0MQY5 61 aa3.82□□□□□ -1.8
APOC1-209ENST00000592885 MUC5ACP98088 5654 aa3.72□□□□□ -1.81
APOC1-209ENST00000592885 MUC5BQ9HC84 5762 aaPredicted RBP3.71□□□□□ -1.81
APOC1-209ENST00000592885 MT3P25713 68 aa3.7□□□□□ -1.82
APOC1-209ENST00000592885 AHNAKQ09666 5890 aaKnown RBP3.69□□□□□ -1.82
APOC1-209ENST00000592885 OBSCNQ5VST9 7968 aa3.68□□□□□ -1.82
APOC1-209ENST00000592885 KRTAP5-1Q6L8H4 278 aa3.61□□□□□ -1.83
APOC1-209ENST00000592885 LUZP6Q538Z0 58 aa3.48□□□□□ -1.85
APOC1-209ENST00000592885 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
APOC1-209ENST00000592885 KRTAP5-11Q6L8G4 156 aa3.45□□□□□ -1.86
APOC1-209ENST00000592885 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
APOC1-209ENST00000592885 NDUFAF8A1L188 74 aa3.35□□□□□ -1.87
APOC1-209ENST00000592885 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
APOC1-209ENST00000592885 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
APOC1-209ENST00000592885 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
APOC1-209ENST00000592885 LCE3DQ9BYE3 92 aa2.94□□□□□ -1.94
APOC1-209ENST00000592885 INE1O15225 51 aa2.8□□□□□ -1.96
APOC1-209ENST00000592885 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
APOC1-209ENST00000592885 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
APOC1-209ENST00000592885 KRTAP21-2Q3LI59 83 aa2.63□□□□□ -1.99
APOC1-209ENST00000592885 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
APOC1-209ENST00000592885 PRM1P04553 51 aa2.3□□□□□ -2.04
APOC1-209ENST00000592885 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
APOC1-209ENST00000592885 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
APOC1-209ENST00000592885 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 130 ms