RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 MT1XP80297 61 aa2.55□□□□□ -2
VPS25-204ENST00000589577 KRTAP12-2P59991 146 aa2.54□□□□□ -2
VPS25-204ENST00000589577 PLAC4Q8WY50 150 aa2.54□□□□□ -2
VPS25-204ENST00000589577 A6NED7 52 aa2.52□□□□□ -2.01
VPS25-204ENST00000589577 K7ERS5 55 aa2.52□□□□□ -2.01
VPS25-204ENST00000589577 A0A0D9SG42 100 aa2.51□□□□□ -2.01
VPS25-204ENST00000589577 MIR22HGQ0VDD5 57 aa2.5□□□□□ -2.01
VPS25-204ENST00000589577 SPATA8Q6RVD6 105 aa2.5□□□□□ -2.01
VPS25-204ENST00000589577 MT4P47944 62 aa2.49□□□□□ -2.01
VPS25-204ENST00000589577 SPRR5A0A1B0GTR4 108 aa2.48□□□□□ -2.01
VPS25-204ENST00000589577 SPINT4Q6UDR6 99 aa2.48□□□□□ -2.01
VPS25-204ENST00000589577 CAMK2N1Q7Z7J9 78 aa2.48□□□□□ -2.01
VPS25-204ENST00000589577 PRO2289Q9P1D8 64 aa2.48□□□□□ -2.01
VPS25-204ENST00000589577 KRTAP13-4Q3LI77 160 aa2.47□□□□□ -2.01
VPS25-204ENST00000589577 A8MU10 97 aa2.44□□□□□ -2.02
VPS25-204ENST00000589577 KRTAP10-7P60409 375 aaPredicted RBP2.43□□□□□ -2.02
VPS25-204ENST00000589577 CDC42SE1Q9NRR8 79 aa2.42□□□□□ -2.02
VPS25-204ENST00000589577 KRTAP12-1P59990 96 aa2.41□□□□□ -2.02
VPS25-204ENST00000589577 KRTAP10-12P60413 245 aa2.41□□□□□ -2.02
VPS25-204ENST00000589577 BRK1Q8WUW1 75 aa2.4□□□□□ -2.03
VPS25-204ENST00000589577 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
VPS25-204ENST00000589577 KRTAP5-4Q6L8H1 288 aa2.36□□□□□ -2.03
VPS25-204ENST00000589577 KRTAP23-1A1A580 65 aa2.35□□□□□ -2.03
VPS25-204ENST00000589577 TNP1P09430 55 aa2.33□□□□□ -2.04
VPS25-204ENST00000589577 KRTAP19-3Q7Z4W3 81 aa2.33□□□□□ -2.04
VPS25-204ENST00000589577 MUC5ACP98088 5654 aa2.33□□□□□ -2.04
VPS25-204ENST00000589577 KRTAP15-1Q3LI76 137 aa2.32□□□□□ -2.04
VPS25-204ENST00000589577 ROMO1P60602 79 aa2.29□□□□□ -2.04
VPS25-204ENST00000589577 KRTAP19-7Q3SYF9 63 aa2.29□□□□□ -2.04
VPS25-204ENST00000589577 MT1EP04732 61 aa2.28□□□□□ -2.04
VPS25-204ENST00000589577 KRTAP25-1Q3LHN0 102 aa2.28□□□□□ -2.04
VPS25-204ENST00000589577 PMAIP1Q13794 54 aa2.27□□□□□ -2.05
VPS25-204ENST00000589577 PRO0628Q9UI54 55 aa2.27□□□□□ -2.05
VPS25-204ENST00000589577 C10orf95Q9H7T3 257 aa2.26□□□□□ -2.05
VPS25-204ENST00000589577 MUC5BQ9HC84 5762 aaPredicted RBP2.25□□□□□ -2.05
VPS25-204ENST00000589577 KRTAP20-2Q3LI61 65 aa2.24□□□□□ -2.05
VPS25-204ENST00000589577 PP632Q6XCG6 107 aa2.21□□□□□ -2.06
VPS25-204ENST00000589577 MT1GP13640 62 aa2.2□□□□□ -2.06
VPS25-204ENST00000589577 MT1MQ8N339 61 aa2.2□□□□□ -2.06
VPS25-204ENST00000589577 KRTAP4-3Q9BYR4 195 aa2.2□□□□□ -2.06
VPS25-204ENST00000589577 A0A0A0MQY5 61 aa2.18□□□□□ -2.06
VPS25-204ENST00000589577 LCE3AQ5TA76 89 aa2.17□□□□□ -2.06
VPS25-204ENST00000589577 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
VPS25-204ENST00000589577 KTN1-AS1Q86SY8 53 aa2.12□□□□□ -2.07
VPS25-204ENST00000589577 KRTAP12-3P60328 96 aa2.11□□□□□ -2.07
VPS25-204ENST00000589577 MT1LQ93083 61 aa2.11□□□□□ -2.07
VPS25-204ENST00000589577 KRTAP19-5Q3LI72 72 aa2.1□□□□□ -2.07
VPS25-204ENST00000589577 KRTAP5-5Q701N2 237 aaPredicted RBP2.09□□□□□ -2.07
VPS25-204ENST00000589577 PRAC1Q96KF2 57 aa2.06□□□□□ -2.08
VPS25-204ENST00000589577 KRTAP12-4P60329 112 aa2.05□□□□□ -2.08
VPS25-204ENST00000589577 SYNE1Q8NF91 8797 aaKnown RBP2.05□□□□□ -2.08
VPS25-204ENST00000589577 OBSCNQ5VST9 7968 aa2.03□□□□□ -2.08
VPS25-204ENST00000589577 KRTAP5-2Q701N4 177 aa2.02□□□□□ -2.09
VPS25-204ENST00000589577 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.1
VPS25-204ENST00000589577 LCE3CQ5T5A8 94 aa1.95□□□□□ -2.1
VPS25-204ENST00000589577 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
VPS25-204ENST00000589577 LCE1EQ5T753 118 aa1.88□□□□□ -2.11
VPS25-204ENST00000589577 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
VPS25-204ENST00000589577 LUZP6Q538Z0 58 aa1.85□□□□□ -2.11
VPS25-204ENST00000589577 MT3P25713 68 aa1.83□□□□□ -2.12
VPS25-204ENST00000589577 KRTAP6-1Q3LI64 71 aa1.81□□□□□ -2.12
VPS25-204ENST00000589577 KRTAP6-2Q3LI66 62 aa1.8□□□□□ -2.12
VPS25-204ENST00000589577 MT1AP04731 61 aa1.77□□□□□ -2.13
VPS25-204ENST00000589577 KRTAP9-6A8MVA2 160 aa1.75□□□□□ -2.13
VPS25-204ENST00000589577 NDUFAF8A1L188 74 aa1.62□□□□□ -2.15
VPS25-204ENST00000589577 KRTAP4-4Q9BYR3 166 aa1.62□□□□□ -2.15
VPS25-204ENST00000589577 LCE1FQ5T754 118 aa1.54□□□□□ -2.16
VPS25-204ENST00000589577 PHGR1C9JFL3 82 aa1.53□□□□□ -2.16
VPS25-204ENST00000589577 LCE1BQ5T7P3 118 aa1.53□□□□□ -2.16
VPS25-204ENST00000589577 LCE1CQ5T751 118 aa1.49□□□□□ -2.17
VPS25-204ENST00000589577 LCE3DQ9BYE3 92 aa1.47□□□□□ -2.17
VPS25-204ENST00000589577 INE1O15225 51 aa1.43□□□□□ -2.18
VPS25-204ENST00000589577 LCE3EQ5T5B0 92 aa1.42□□□□□ -2.18
VPS25-204ENST00000589577 MUC19Q7Z5P9 8384 aa1.25□□□□□ -2.21
VPS25-204ENST00000589577 KRTAP21-2Q3LI59 83 aa1.21□□□□□ -2.22
VPS25-204ENST00000589577 PRM1P04553 51 aa1.16□□□□□ -2.22
VPS25-204ENST00000589577 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
VPS25-204ENST00000589577 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 147.5 ms