RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 KRTAP12-2P59991 146 aa3.58□□□□□ -1.84
SDF2-207ENST00000588472 PRO0628Q9UI54 55 aa3.58□□□□□ -1.84
SDF2-207ENST00000588472 SPRR2DP22532 72 aa3.57□□□□□ -1.84
SDF2-207ENST00000588472 KRTAP10-7P60409 375 aaPredicted RBP3.56□□□□□ -1.84
SDF2-207ENST00000588472 KRTAP13-4Q3LI77 160 aa3.56□□□□□ -1.84
SDF2-207ENST00000588472 LCE1AQ5T7P2 110 aa3.56□□□□□ -1.84
SDF2-207ENST00000588472 SPATA8Q6RVD6 105 aa3.54□□□□□ -1.84
SDF2-207ENST00000588472 CAMK2N1Q7Z7J9 78 aa3.52□□□□□ -1.85
SDF2-207ENST00000588472 A0A0D9SG42 100 aa3.51□□□□□ -1.85
SDF2-207ENST00000588472 K7ERS5 55 aa3.51□□□□□ -1.85
SDF2-207ENST00000588472 A0A0A0MQY5 61 aa3.5□□□□□ -1.85
SDF2-207ENST00000588472 KRTAP10-12P60413 245 aa3.5□□□□□ -1.85
SDF2-207ENST00000588472 A8MU10 97 aa3.49□□□□□ -1.85
SDF2-207ENST00000588472 PMAIP1Q13794 54 aa3.46□□□□□ -1.86
SDF2-207ENST00000588472 SPINT4Q6UDR6 99 aa3.45□□□□□ -1.86
SDF2-207ENST00000588472 GPR98Q8WXG9 6306 aa3.42□□□□□ -1.86
SDF2-207ENST00000588472 KRTAP12-1P59990 96 aa3.38□□□□□ -1.87
SDF2-207ENST00000588472 KRTAP15-1Q3LI76 137 aa3.33□□□□□ -1.88
SDF2-207ENST00000588472 KTN1-AS1Q86SY8 53 aa3.32□□□□□ -1.88
SDF2-207ENST00000588472 KRTAP19-7Q3SYF9 63 aa3.31□□□□□ -1.88
SDF2-207ENST00000588472 DSTQ03001 7570 aaKnown RBP3.3□□□□□ -1.88
SDF2-207ENST00000588472 ROMO1P60602 79 aa3.29□□□□□ -1.88
SDF2-207ENST00000588472 MT1EP04732 61 aa3.28□□□□□ -1.88
SDF2-207ENST00000588472 KRTAP19-5Q3LI72 72 aa3.27□□□□□ -1.89
SDF2-207ENST00000588472 KRTAP19-3Q7Z4W3 81 aa3.25□□□□□ -1.89
SDF2-207ENST00000588472 C10orf95Q9H7T3 257 aa3.23□□□□□ -1.89
SDF2-207ENST00000588472 TNP1P09430 55 aa3.22□□□□□ -1.89
SDF2-207ENST00000588472 PRAC1Q96KF2 57 aa3.21□□□□□ -1.9
SDF2-207ENST00000588472 LCE3AQ5TA76 89 aa3.2□□□□□ -1.9
SDF2-207ENST00000588472 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
SDF2-207ENST00000588472 MT1GP13640 62 aa3.17□□□□□ -1.9
SDF2-207ENST00000588472 PP632Q6XCG6 107 aa3.16□□□□□ -1.9
SDF2-207ENST00000588472 MT4P47944 62 aa3.14□□□□□ -1.91
SDF2-207ENST00000588472 KRTAP25-1Q3LHN0 102 aa3.14□□□□□ -1.91
SDF2-207ENST00000588472 MT1LQ93083 61 aa3.14□□□□□ -1.91
SDF2-207ENST00000588472 KRTAP5-10Q6L8G5 202 aa3.13□□□□□ -1.91
SDF2-207ENST00000588472 MT1MQ8N339 61 aa3.13□□□□□ -1.91
SDF2-207ENST00000588472 HMCN1Q96RW7 5635 aa3.11□□□□□ -1.91
SDF2-207ENST00000588472 KRTAP4-3Q9BYR4 195 aa3.1□□□□□ -1.91
SDF2-207ENST00000588472 AHNAK2Q8IVF2 5795 aa3.1□□□□□ -1.91
SDF2-207ENST00000588472 KRTAP12-3P60328 96 aa3.07□□□□□ -1.92
SDF2-207ENST00000588472 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
SDF2-207ENST00000588472 KRTAP5-7Q6L8G8 165 aa3.05□□□□□ -1.92
SDF2-207ENST00000588472 SPRR5A0A1B0GTR4 108 aa2.99□□□□□ -1.93
SDF2-207ENST00000588472 KRTAP5-4Q6L8H1 288 aa2.97□□□□□ -1.93
SDF2-207ENST00000588472 KRTAP20-2Q3LI61 65 aa2.85□□□□□ -1.95
SDF2-207ENST00000588472 LCE3CQ5T5A8 94 aa2.83□□□□□ -1.96
SDF2-207ENST00000588472 KRTAP5-5Q701N2 237 aaPredicted RBP2.83□□□□□ -1.96
SDF2-207ENST00000588472 KRTAP12-4P60329 112 aa2.8□□□□□ -1.96
SDF2-207ENST00000588472 SYNE1Q8NF91 8797 aaKnown RBP2.75□□□□□ -1.97
SDF2-207ENST00000588472 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
SDF2-207ENST00000588472 NDUFAF8A1L188 74 aa2.74□□□□□ -1.97
SDF2-207ENST00000588472 LCE1EQ5T753 118 aa2.73□□□□□ -1.97
SDF2-207ENST00000588472 LUZP6Q538Z0 58 aa2.71□□□□□ -1.98
SDF2-207ENST00000588472 KRTAP6-1Q3LI64 71 aa2.68□□□□□ -1.98
SDF2-207ENST00000588472 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
SDF2-207ENST00000588472 MT3P25713 68 aa2.67□□□□□ -1.98
SDF2-207ENST00000588472 KRTAP9-6A8MVA2 160 aa2.66□□□□□ -1.98
SDF2-207ENST00000588472 MT1AP04731 61 aa2.66□□□□□ -1.98
SDF2-207ENST00000588472 MUC5ACP98088 5654 aa2.63□□□□□ -1.99
SDF2-207ENST00000588472 AHNAKQ09666 5890 aaKnown RBP2.61□□□□□ -1.99
SDF2-207ENST00000588472 KRTAP5-8O75690 187 aa2.6□□□□□ -1.99
SDF2-207ENST00000588472 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
SDF2-207ENST00000588472 KRTAP5-2Q701N4 177 aa2.57□□□□□ -2
SDF2-207ENST00000588472 KRTAP6-2Q3LI66 62 aa2.56□□□□□ -2
SDF2-207ENST00000588472 OBSCNQ5VST9 7968 aa2.43□□□□□ -2.02
SDF2-207ENST00000588472 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
SDF2-207ENST00000588472 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
SDF2-207ENST00000588472 INE1O15225 51 aa2.15□□□□□ -2.07
SDF2-207ENST00000588472 LCE3EQ5T5B0 92 aa2.05□□□□□ -2.08
SDF2-207ENST00000588472 LCE1CQ5T751 118 aa2.05□□□□□ -2.08
SDF2-207ENST00000588472 LCE3DQ9BYE3 92 aa2.05□□□□□ -2.08
SDF2-207ENST00000588472 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
SDF2-207ENST00000588472 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
SDF2-207ENST00000588472 PRM1P04553 51 aa1.71□□□□□ -2.14
SDF2-207ENST00000588472 MUC19Q7Z5P9 8384 aa1.5□□□□□ -2.17
SDF2-207ENST00000588472 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
SDF2-207ENST00000588472 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 78.1 ms