RNA–Protein interactions for RNA: ENST00000584878.1

NLK-206, Transcript of nemo like kinase, humanhuman

TSL 1 (best)

Gene NLK, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-206ENST00000584878 TRRAPQ9Y4A5 3859 aa0.38□□□□□ -2.35
NLK-206ENST00000584878 CEP295Q9C0D2 2601 aa0.38□□□□□ -2.35
NLK-206ENST00000584878 NBEAQ8NFP9 2946 aa0.38□□□□□ -2.35
NLK-206ENST00000584878 LOC400499M0QZD8 3231 aa0.38□□□□□ -2.35
NLK-206ENST00000584878 MYO15AQ9UKN7 3530 aa0.38□□□□□ -2.35
NLK-206ENST00000584878 KMT2DO14686 5537 aa0.38□□□□□ -2.35
NLK-206ENST00000584878 SMG1Q96Q15 3661 aaKnown RBP0.38□□□□□ -2.35
NLK-206ENST00000584878 NIPBLQ6KC79 2804 aaeCLIP0.38□□□□□ -2.35
NLK-206ENST00000584878 LRP1BQ9NZR2 4599 aa0.37□□□□□ -2.35
NLK-206ENST00000584878 TRIOO75962 3097 aa0.37□□□□□ -2.35
NLK-206ENST00000584878 SPRR2AP35326 72 aa0.37□□□□□ -2.35
NLK-206ENST00000584878 DEFB124Q8NES8 71 aa0.37□□□□□ -2.35
NLK-206ENST00000584878 HMCN2Q8NDA2 5059 aa0.37□□□□□ -2.35
NLK-206ENST00000584878 SVEP1Q4LDE5 3571 aa0.37□□□□□ -2.35
NLK-206ENST00000584878 FAT1Q14517 4588 aa0.37□□□□□ -2.35
NLK-206ENST00000584878 LRBAP50851 2863 aa0.36□□□□□ -2.35
NLK-206ENST00000584878 SYNE1Q8NF91 8797 aaKnown RBP0.36□□□□□ -2.35
NLK-206ENST00000584878 MT1AP04731 61 aa0.36□□□□□ -2.35
NLK-206ENST00000584878 KRTAP19-5Q3LI72 72 aa0.36□□□□□ -2.35
NLK-206ENST00000584878 WDR87Q6ZQQ6 2873 aa0.36□□□□□ -2.35
NLK-206ENST00000584878 MXRA5Q9NR99 2828 aa0.36□□□□□ -2.35
NLK-206ENST00000584878 RNF213Q63HN8 5207 aa0.35□□□□□ -2.35
NLK-206ENST00000584878 APELAP0DMC3 54 aa0.35□□□□□ -2.35
NLK-206ENST00000584878 DEFB1P60022 68 aa0.35□□□□□ -2.35
NLK-206ENST00000584878 KRTAP6-2Q3LI66 62 aa0.35□□□□□ -2.35
NLK-206ENST00000584878 VPS13AQ96RL7 3174 aa0.35□□□□□ -2.35
NLK-206ENST00000584878 FREM2Q5SZK8 3169 aa0.35□□□□□ -2.35
NLK-206ENST00000584878 MDN1Q9NU22 5596 aa0.35□□□□□ -2.35
NLK-206ENST00000584878 DNAH5Q8TE73 4624 aa0.34□□□□□ -2.35
NLK-206ENST00000584878 SMR3BP02814 79 aaPredicted RBP0.34□□□□□ -2.36
NLK-206ENST00000584878 LAMA1P25391 3075 aa0.34□□□□□ -2.36
NLK-206ENST00000584878 DEFB136Q30KP8 78 aa0.34□□□□□ -2.36
NLK-206ENST00000584878 DYNC1H1Q14204 4646 aaKnown RBP0.33□□□□□ -2.36
NLK-206ENST00000584878 DNAH17Q9UFH2 4485 aa0.33□□□□□ -2.36
NLK-206ENST00000584878 A0A096LNI7 61 aa0.33□□□□□ -2.36
NLK-206ENST00000584878 SPRR2EP22531 72 aa0.33□□□□□ -2.36
NLK-206ENST00000584878 KRTAP19-6Q3LI70 58 aa0.33□□□□□ -2.36
NLK-206ENST00000584878 SPRR2FQ96RM1 72 aa0.33□□□□□ -2.36
NLK-206ENST00000584878 ADGRG4Q8IZF6 3080 aa0.32□□□□□ -2.36
NLK-206ENST00000584878 ITPR2Q14571 2701 aa0.32□□□□□ -2.36
NLK-206ENST00000584878 DMDP11532 3685 aa0.32□□□□□ -2.36
NLK-206ENST00000584878 VPS13CQ709C8 3753 aa0.31□□□□□ -2.36
NLK-206ENST00000584878 MAP1AP78559 2803 aaPredicted RBP0.31□□□□□ -2.36
NLK-206ENST00000584878 USH2AO75445 5202 aa0.31□□□□□ -2.36
NLK-206ENST00000584878 HTN1P15515 57 aa0.3□□□□□ -2.36
NLK-206ENST00000584878 MUC12Q9UKN1 5478 aa0.3□□□□□ -2.36
NLK-206ENST00000584878 MUC17Q685J3 4493 aa0.29□□□□□ -2.36
NLK-206ENST00000584878 MT4P47944 62 aa0.29□□□□□ -2.36
NLK-206ENST00000584878 RPS29P62273 56 aaKnown RBP0.29□□□□□ -2.36
NLK-206ENST00000584878 LRP2P98164 4655 aa0.27□□□□□ -2.37
NLK-206ENST00000584878 DEFB133Q30KQ1 61 aa0.27□□□□□ -2.37
NLK-206ENST00000584878 STATHP02808 62 aa0.26□□□□□ -2.37
NLK-206ENST00000584878 STARD9Q9P2P6 4700 aa0.25□□□□□ -2.37
NLK-206ENST00000584878 CENPEQ02224 2701 aa0.25□□□□□ -2.37
NLK-206ENST00000584878 LINC01556Q5JQF7 62 aa0.25□□□□□ -2.37
NLK-206ENST00000584878 A0A096LPF7 62 aa0.22□□□□□ -2.37
NLK-206ENST00000584878 COX14Q96I36 57 aa0.22□□□□□ -2.37
NLK-206ENST00000584878 MT1EP04732 61 aa0.21□□□□□ -2.38
NLK-206ENST00000584878 MT1HP80294 61 aa0.21□□□□□ -2.38
NLK-206ENST00000584878 DEFB108BQ8NET1 73 aa0.2□□□□□ -2.38
NLK-206ENST00000584878 Q9Y3F1 56 aa0.2□□□□□ -2.38
NLK-206ENST00000584878 CD52P31358 61 aa0.18□□□□□ -2.38
NLK-206ENST00000584878 MT1LQ93083 61 aa0.18□□□□□ -2.38
NLK-206ENST00000584878 KRTAP20-2Q3LI61 65 aa0.17□□□□□ -2.38
NLK-206ENST00000584878 DEFB4AO15263 64 aa0.16□□□□□ -2.38
NLK-206ENST00000584878 MT1HL1P0DM35 61 aa0.14□□□□□ -2.39
NLK-206ENST00000584878 MT1XP80297 61 aa0.14□□□□□ -2.39
NLK-206ENST00000584878 SPRR2GQ9BYE4 73 aa0.13□□□□□ -2.39
NLK-206ENST00000584878 HTN3P15516 51 aa0.09□□□□□ -2.4
NLK-206ENST00000584878 MT1GP13640 62 aa0.08□□□□□ -2.4
NLK-206ENST00000584878 KRTAP6-1Q3LI64 71 aa0.08□□□□□ -2.4
NLK-206ENST00000584878 KRTAP19-7Q3SYF9 63 aa0.08□□□□□ -2.4
NLK-206ENST00000584878 KRTAP19-8Q3LI54 63 aa0.07□□□□□ -2.4
NLK-206ENST00000584878 MT2AP02795 61 aa0.05□□□□□ -2.4
NLK-206ENST00000584878 MT1FP04733 61 aa0.05□□□□□ -2.4
NLK-206ENST00000584878 KRTAP19-2Q3LHN2 52 aa0.05□□□□□ -2.4
NLK-206ENST00000584878 MT1BP07438 61 aa0.04□□□□□ -2.4
NLK-206ENST00000584878 MT1MQ8N339 61 aa0.04□□□□□ -2.4
Retrieved 78 of 20,778 RNA–protein pairs in 59.5 ms