RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 KRTAP25-1Q3LHN0 102 aa3.94□□□□□ -1.78
SKA2-208ENST00000583927 KRTAP13-4Q3LI77 160 aa3.94□□□□□ -1.78
SKA2-208ENST00000583927 SPRR2EP22531 72 aa3.93□□□□□ -1.78
SKA2-208ENST00000583927 SPRR2BP35325 72 aa3.93□□□□□ -1.78
SKA2-208ENST00000583927 SPRR2AP35326 72 aa3.93□□□□□ -1.78
SKA2-208ENST00000583927 KRTAP2-3P0C7H8 128 aa3.92□□□□□ -1.78
SKA2-208ENST00000583927 ROMO1P60602 79 aa3.92□□□□□ -1.78
SKA2-208ENST00000583927 LCE1AQ5T7P2 110 aa3.92□□□□□ -1.78
SKA2-208ENST00000583927 KRTAP2-4Q9BYR9 128 aa3.92□□□□□ -1.78
SKA2-208ENST00000583927 CAMK2N1Q7Z7J9 78 aa3.84□□□□□ -1.79
SKA2-208ENST00000583927 A0A1B0GU33 70 aa3.83□□□□□ -1.8
SKA2-208ENST00000583927 SPRR2DP22532 72 aa3.8□□□□□ -1.8
SKA2-208ENST00000583927 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
SKA2-208ENST00000583927 KRTAP2-1Q9BYU5 128 aa3.8□□□□□ -1.8
SKA2-208ENST00000583927 A0A0D9SG42 100 aa3.77□□□□□ -1.81
SKA2-208ENST00000583927 KRTAP12-1P59990 96 aa3.76□□□□□ -1.81
SKA2-208ENST00000583927 K7ERS5 55 aa3.75□□□□□ -1.81
SKA2-208ENST00000583927 KRTAP19-7Q3SYF9 63 aa3.73□□□□□ -1.81
SKA2-208ENST00000583927 SPINT4Q6UDR6 99 aa3.73□□□□□ -1.81
SKA2-208ENST00000583927 MT1EP04732 61 aa3.69□□□□□ -1.82
SKA2-208ENST00000583927 KRTAP15-1Q3LI76 137 aa3.68□□□□□ -1.82
SKA2-208ENST00000583927 KRTAP19-3Q7Z4W3 81 aa3.66□□□□□ -1.82
SKA2-208ENST00000583927 DSTQ03001 7570 aaKnown RBP3.63□□□□□ -1.83
SKA2-208ENST00000583927 KRTAP19-5Q3LI72 72 aa3.6□□□□□ -1.83
SKA2-208ENST00000583927 TNP1P09430 55 aa3.59□□□□□ -1.83
SKA2-208ENST00000583927 MT1GP13640 62 aa3.59□□□□□ -1.83
SKA2-208ENST00000583927 C10orf95Q9H7T3 257 aa3.59□□□□□ -1.83
SKA2-208ENST00000583927 NDUFAF8A1L188 74 aa3.56□□□□□ -1.84
SKA2-208ENST00000583927 PP632Q6XCG6 107 aa3.56□□□□□ -1.84
SKA2-208ENST00000583927 LCE3AQ5TA76 89 aa3.53□□□□□ -1.84
SKA2-208ENST00000583927 MT1LQ93083 61 aa3.53□□□□□ -1.84
SKA2-208ENST00000583927 MT1MQ8N339 61 aa3.51□□□□□ -1.85
SKA2-208ENST00000583927 A0A0A0MQY5 61 aa3.45□□□□□ -1.86
SKA2-208ENST00000583927 KRTAP23-1A1A580 65 aa3.42□□□□□ -1.86
SKA2-208ENST00000583927 KRTAP12-3P60328 96 aa3.42□□□□□ -1.86
SKA2-208ENST00000583927 KRTAP5-4Q6L8H1 288 aa3.37□□□□□ -1.87
SKA2-208ENST00000583927 LUZP6Q538Z0 58 aa3.36□□□□□ -1.87
SKA2-208ENST00000583927 KRTAP4-3Q9BYR4 195 aa3.36□□□□□ -1.87
SKA2-208ENST00000583927 HMCN1Q96RW7 5635 aa3.35□□□□□ -1.87
SKA2-208ENST00000583927 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
SKA2-208ENST00000583927 MT4P47944 62 aa3.3□□□□□ -1.88
SKA2-208ENST00000583927 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
SKA2-208ENST00000583927 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
SKA2-208ENST00000583927 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
SKA2-208ENST00000583927 SPRR5A0A1B0GTR4 108 aa3.22□□□□□ -1.89
SKA2-208ENST00000583927 AHNAK2Q8IVF2 5795 aa3.2□□□□□ -1.9
SKA2-208ENST00000583927 LCE3CQ5T5A8 94 aa3.16□□□□□ -1.9
SKA2-208ENST00000583927 KRTAP20-2Q3LI61 65 aa3.15□□□□□ -1.91
SKA2-208ENST00000583927 KRTAP5-10Q6L8G5 202 aa3.15□□□□□ -1.91
SKA2-208ENST00000583927 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
SKA2-208ENST00000583927 SYNE1Q8NF91 8797 aaKnown RBP3.1□□□□□ -1.91
SKA2-208ENST00000583927 KRTAP5-7Q6L8G8 165 aa3.04□□□□□ -1.92
SKA2-208ENST00000583927 INE1O15225 51 aa3.03□□□□□ -1.92
SKA2-208ENST00000583927 MT1AP04731 61 aa3.01□□□□□ -1.93
SKA2-208ENST00000583927 LCE1EQ5T753 118 aa3□□□□□ -1.93
SKA2-208ENST00000583927 KRTAP6-1Q3LI64 71 aa2.97□□□□□ -1.93
SKA2-208ENST00000583927 KRTAP9-6A8MVA2 160 aa2.96□□□□□ -1.94
SKA2-208ENST00000583927 KRTAP5-2Q701N4 177 aa2.96□□□□□ -1.94
SKA2-208ENST00000583927 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
SKA2-208ENST00000583927 KRTAP6-2Q3LI66 62 aa2.83□□□□□ -1.96
SKA2-208ENST00000583927 KRTAP5-8O75690 187 aa2.78□□□□□ -1.96
SKA2-208ENST00000583927 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
SKA2-208ENST00000583927 MT3P25713 68 aa2.76□□□□□ -1.97
SKA2-208ENST00000583927 OBSCNQ5VST9 7968 aa2.75□□□□□ -1.97
SKA2-208ENST00000583927 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.98
SKA2-208ENST00000583927 MUC5ACP98088 5654 aa2.6□□□□□ -1.99
SKA2-208ENST00000583927 AHNAKQ09666 5890 aaKnown RBP2.58□□□□□ -2
SKA2-208ENST00000583927 LCE1FQ5T754 118 aa2.47□□□□□ -2.01
SKA2-208ENST00000583927 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
SKA2-208ENST00000583927 LCE1BQ5T7P3 118 aa2.37□□□□□ -2.03
SKA2-208ENST00000583927 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
SKA2-208ENST00000583927 LCE3EQ5T5B0 92 aa2.15□□□□□ -2.07
SKA2-208ENST00000583927 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
SKA2-208ENST00000583927 PRM1P04553 51 aa1.97□□□□□ -2.09
SKA2-208ENST00000583927 PHGR1C9JFL3 82 aa1.84□□□□□ -2.11
SKA2-208ENST00000583927 MUC19Q7Z5P9 8384 aa1.7□□□□□ -2.14
SKA2-208ENST00000583927 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
SKA2-208ENST00000583927 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 12.1 ms