RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 SPINT4Q6UDR6 99 aa2.41□□□□□ -2.02
VAPA-207ENST00000583879 KRTAP19-8Q3LI54 63 aa2.4□□□□□ -2.03
VAPA-207ENST00000583879 SPATA8Q6RVD6 105 aa2.4□□□□□ -2.03
VAPA-207ENST00000583879 R4GN34 69 aa2.4□□□□□ -2.03
VAPA-207ENST00000583879 KMT2DO14686 5537 aa2.39□□□□□ -2.03
VAPA-207ENST00000583879 JMJD7-PLA2G4BH0Y9G9 81 aa2.39□□□□□ -2.03
VAPA-207ENST00000583879 SPRR2GQ9BYE4 73 aa2.38□□□□□ -2.03
VAPA-207ENST00000583879 MDN1Q9NU22 5596 aa2.38□□□□□ -2.03
VAPA-207ENST00000583879 MRPL34Q9BQ48 92 aaKnown RBP2.37□□□□□ -2.03
VAPA-207ENST00000583879 MMP24-AS1A0A0U1RRL7 71 aa2.34□□□□□ -2.03
VAPA-207ENST00000583879 KRTAP5-2Q701N4 177 aa2.33□□□□□ -2.04
VAPA-207ENST00000583879 KRTAP2-1Q9BYU5 128 aa2.33□□□□□ -2.04
VAPA-207ENST00000583879 LOC110117498A0A087WWA1 95 aa2.32□□□□□ -2.04
VAPA-207ENST00000583879 SPRR2EP22531 72 aa2.32□□□□□ -2.04
VAPA-207ENST00000583879 SPRR2BP35325 72 aa2.32□□□□□ -2.04
VAPA-207ENST00000583879 SPRR2AP35326 72 aa2.32□□□□□ -2.04
VAPA-207ENST00000583879 LCE3CQ5T5A8 94 aa2.32□□□□□ -2.04
VAPA-207ENST00000583879 SPRR2FQ96RM1 72 aa2.31□□□□□ -2.04
VAPA-207ENST00000583879 K7EQZ3 153 aa2.3□□□□□ -2.04
VAPA-207ENST00000583879 S4R3F8 94 aa2.3□□□□□ -2.04
VAPA-207ENST00000583879 COA5Q86WW8 74 aa2.29□□□□□ -2.04
VAPA-207ENST00000583879 CRIPTQ9P021 101 aa2.28□□□□□ -2.04
VAPA-207ENST00000583879 LCE3AQ5TA76 89 aa2.27□□□□□ -2.05
VAPA-207ENST00000583879 A0A1B0GU69 56 aa2.26□□□□□ -2.05
VAPA-207ENST00000583879 KRTAP8-1Q8IUC2 63 aa2.26□□□□□ -2.05
VAPA-207ENST00000583879 SPRR2DP22532 72 aa2.25□□□□□ -2.05
VAPA-207ENST00000583879 INE1O15225 51 aa2.24□□□□□ -2.05
VAPA-207ENST00000583879 ACYP2P14621 99 aa2.24□□□□□ -2.05
VAPA-207ENST00000583879 Q8N9L7 120 aa2.23□□□□□ -2.05
VAPA-207ENST00000583879 MT1XP80297 61 aa2.22□□□□□ -2.05
VAPA-207ENST00000583879 KRTAP12-2P59991 146 aa2.21□□□□□ -2.06
VAPA-207ENST00000583879 H0YAA0 97 aa2.19□□□□□ -2.06
VAPA-207ENST00000583879 PLAC4Q8WY50 150 aa2.19□□□□□ -2.06
VAPA-207ENST00000583879 TP53AIP1Q9HCN2 124 aa2.18□□□□□ -2.06
VAPA-207ENST00000583879 GPR98Q8WXG9 6306 aa2.14□□□□□ -2.07
VAPA-207ENST00000583879 DSTQ03001 7570 aaKnown RBP2.14□□□□□ -2.07
VAPA-207ENST00000583879 LCE3EQ5T5B0 92 aa2.11□□□□□ -2.07
VAPA-207ENST00000583879 M0QZ58 72 aa2.09□□□□□ -2.07
VAPA-207ENST00000583879 PP632Q6XCG6 107 aa2.08□□□□□ -2.08
VAPA-207ENST00000583879 KRTAP5-5Q701N2 237 aaPredicted RBP2.06□□□□□ -2.08
VAPA-207ENST00000583879 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
VAPA-207ENST00000583879 KRTAP19-3Q7Z4W3 81 aa2.01□□□□□ -2.09
VAPA-207ENST00000583879 KRTAP19-7Q3SYF9 63 aa2□□□□□ -2.09
VAPA-207ENST00000583879 LCE1CQ5T751 118 aa2□□□□□ -2.09
VAPA-207ENST00000583879 LCE1BQ5T7P3 118 aa2□□□□□ -2.09
VAPA-207ENST00000583879 MT1EP04732 61 aa1.98□□□□□ -2.09
VAPA-207ENST00000583879 MT4P47944 62 aa1.98□□□□□ -2.09
VAPA-207ENST00000583879 KRTAP5-10Q6L8G5 202 aa1.97□□□□□ -2.09
VAPA-207ENST00000583879 MT1GP13640 62 aa1.96□□□□□ -2.1
VAPA-207ENST00000583879 HMCN1Q96RW7 5635 aa1.95□□□□□ -2.1
VAPA-207ENST00000583879 KRTAP5-7Q6L8G8 165 aa1.92□□□□□ -2.1
VAPA-207ENST00000583879 AHNAK2Q8IVF2 5795 aa1.92□□□□□ -2.1
VAPA-207ENST00000583879 KRTAP19-5Q3LI72 72 aa1.9□□□□□ -2.11
VAPA-207ENST00000583879 KRTAP13-4Q3LI77 160 aa1.9□□□□□ -2.11
VAPA-207ENST00000583879 A0A0D9SG42 100 aa1.89□□□□□ -2.11
VAPA-207ENST00000583879 MT1MQ8N339 61 aa1.89□□□□□ -2.11
VAPA-207ENST00000583879 MT1LQ93083 61 aa1.86□□□□□ -2.11
VAPA-207ENST00000583879 C10orf95Q9H7T3 257 aa1.85□□□□□ -2.11
VAPA-207ENST00000583879 SPRR5A0A1B0GTR4 108 aa1.83□□□□□ -2.12
VAPA-207ENST00000583879 KRTAP20-2Q3LI61 65 aa1.81□□□□□ -2.12
VAPA-207ENST00000583879 KRTAP12-4P60329 112 aa1.77□□□□□ -2.13
VAPA-207ENST00000583879 KRTAP12-1P59990 96 aa1.76□□□□□ -2.13
VAPA-207ENST00000583879 TNP1P09430 55 aa1.73□□□□□ -2.13
VAPA-207ENST00000583879 KRTAP12-3P60328 96 aa1.7□□□□□ -2.14
VAPA-207ENST00000583879 SYNE1Q8NF91 8797 aaKnown RBP1.7□□□□□ -2.14
VAPA-207ENST00000583879 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
VAPA-207ENST00000583879 LCE3DQ9BYE3 92 aa1.65□□□□□ -2.15
VAPA-207ENST00000583879 MUC5ACP98088 5654 aa1.64□□□□□ -2.15
VAPA-207ENST00000583879 AHNAKQ09666 5890 aaKnown RBP1.61□□□□□ -2.15
VAPA-207ENST00000583879 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
VAPA-207ENST00000583879 KRTAP6-1Q3LI64 71 aa1.59□□□□□ -2.15
VAPA-207ENST00000583879 MT1AP04731 61 aa1.58□□□□□ -2.16
VAPA-207ENST00000583879 KRTAP6-2Q3LI66 62 aa1.55□□□□□ -2.16
VAPA-207ENST00000583879 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
VAPA-207ENST00000583879 PHGR1C9JFL3 82 aa1.15□□□□□ -2.23
VAPA-207ENST00000583879 PRM1P04553 51 aa1.09□□□□□ -2.23
VAPA-207ENST00000583879 KRTAP21-1Q3LI58 79 aa0.88□□□□□ -2.27
VAPA-207ENST00000583879 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 1059.4 ms