RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 MIR22HGQ0VDD5 57 aa3.25□□□□□ -1.89
CCDC47-205ENST00000582331 A0A1B0GU33 70 aa3.24□□□□□ -1.89
CCDC47-205ENST00000582331 CRIPTQ9P021 101 aa3.23□□□□□ -1.89
CCDC47-205ENST00000582331 H0YAA0 97 aa3.22□□□□□ -1.89
CCDC47-205ENST00000582331 PMAIP1Q13794 54 aa3.22□□□□□ -1.89
CCDC47-205ENST00000582331 PRO2289Q9P1D8 64 aa3.22□□□□□ -1.89
CCDC47-205ENST00000582331 P0C880 135 aa3.18□□□□□ -1.9
CCDC47-205ENST00000582331 KRTAP12-2P59991 146 aa3.17□□□□□ -1.9
CCDC47-205ENST00000582331 MT1XP80297 61 aa3.17□□□□□ -1.9
CCDC47-205ENST00000582331 KRTAP13-4Q3LI77 160 aa3.17□□□□□ -1.9
CCDC47-205ENST00000582331 ADM2Q7Z4H4 148 aa3.16□□□□□ -1.9
CCDC47-205ENST00000582331 KTN1-AS1Q86SY8 53 aa3.12□□□□□ -1.91
CCDC47-205ENST00000582331 PLAC4Q8WY50 150 aa3.12□□□□□ -1.91
CCDC47-205ENST00000582331 M0QZ58 72 aa3.09□□□□□ -1.91
CCDC47-205ENST00000582331 DSTQ03001 7570 aaKnown RBP3.09□□□□□ -1.92
CCDC47-205ENST00000582331 A0A0A0MQY5 61 aa3.08□□□□□ -1.92
CCDC47-205ENST00000582331 A0A0D9SG42 100 aa3.08□□□□□ -1.92
CCDC47-205ENST00000582331 K7ERS5 55 aa3.05□□□□□ -1.92
CCDC47-205ENST00000582331 KRTAP12-1P59990 96 aa3.05□□□□□ -1.92
CCDC47-205ENST00000582331 KRTAP10-12P60413 245 aa3.04□□□□□ -1.92
CCDC47-205ENST00000582331 PRAC1Q96KF2 57 aa3.04□□□□□ -1.92
CCDC47-205ENST00000582331 KRTAP5-1Q6L8H4 278 aa3.03□□□□□ -1.92
CCDC47-205ENST00000582331 KRTAP9-6A8MVA2 160 aa3.02□□□□□ -1.93
CCDC47-205ENST00000582331 LCE1FQ5T754 118 aa3□□□□□ -1.93
CCDC47-205ENST00000582331 R4GN34 69 aa3□□□□□ -1.93
CCDC47-205ENST00000582331 ROMO1P60602 79 aa2.99□□□□□ -1.93
CCDC47-205ENST00000582331 SPINT4Q6UDR6 99 aa2.99□□□□□ -1.93
CCDC47-205ENST00000582331 LINC01554Q52M75 96 aa2.97□□□□□ -1.93
CCDC47-205ENST00000582331 AHNAK2Q8IVF2 5795 aa2.94□□□□□ -1.94
CCDC47-205ENST00000582331 KRTAP25-1Q3LHN0 102 aa2.93□□□□□ -1.94
CCDC47-205ENST00000582331 KRTAP5-10Q6L8G5 202 aa2.93□□□□□ -1.94
CCDC47-205ENST00000582331 KRTAP5-4Q6L8H1 288 aa2.93□□□□□ -1.94
CCDC47-205ENST00000582331 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
CCDC47-205ENST00000582331 MT4P47944 62 aa2.92□□□□□ -1.94
CCDC47-205ENST00000582331 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
CCDC47-205ENST00000582331 C10orf95Q9H7T3 257 aa2.89□□□□□ -1.95
CCDC47-205ENST00000582331 KRTAP19-3Q7Z4W3 81 aa2.88□□□□□ -1.95
CCDC47-205ENST00000582331 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
CCDC47-205ENST00000582331 KRTAP19-7Q3SYF9 63 aa2.84□□□□□ -1.95
CCDC47-205ENST00000582331 MT1EP04732 61 aa2.83□□□□□ -1.96
CCDC47-205ENST00000582331 LCE3CQ5T5A8 94 aa2.83□□□□□ -1.96
CCDC47-205ENST00000582331 CAMK2N1Q7Z7J9 78 aa2.83□□□□□ -1.96
CCDC47-205ENST00000582331 MT1GP13640 62 aa2.79□□□□□ -1.96
CCDC47-205ENST00000582331 SPRR5A0A1B0GTR4 108 aa2.78□□□□□ -1.96
CCDC47-205ENST00000582331 PP632Q6XCG6 107 aa2.77□□□□□ -1.97
CCDC47-205ENST00000582331 TNP1P09430 55 aa2.73□□□□□ -1.97
CCDC47-205ENST00000582331 MT1MQ8N339 61 aa2.72□□□□□ -1.97
CCDC47-205ENST00000582331 NDUFAF8A1L188 74 aa2.71□□□□□ -1.98
CCDC47-205ENST00000582331 OBSCNQ5VST9 7968 aa2.71□□□□□ -1.98
CCDC47-205ENST00000582331 KRTAP19-5Q3LI72 72 aa2.7□□□□□ -1.98
CCDC47-205ENST00000582331 KRTAP4-3Q9BYR4 195 aa2.67□□□□□ -1.98
CCDC47-205ENST00000582331 KRTAP20-2Q3LI61 65 aa2.65□□□□□ -1.99
CCDC47-205ENST00000582331 MT1LQ93083 61 aa2.65□□□□□ -1.99
CCDC47-205ENST00000582331 LCE3AQ5TA76 89 aa2.62□□□□□ -1.99
CCDC47-205ENST00000582331 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
CCDC47-205ENST00000582331 KRTAP12-4P60329 112 aa2.56□□□□□ -2
CCDC47-205ENST00000582331 KRTAP5-5Q701N2 237 aaPredicted RBP2.52□□□□□ -2.01
CCDC47-205ENST00000582331 KRTAP12-3P60328 96 aa2.5□□□□□ -2.01
CCDC47-205ENST00000582331 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
CCDC47-205ENST00000582331 MUC5ACP98088 5654 aa2.48□□□□□ -2.01
CCDC47-205ENST00000582331 SYNE1Q8NF91 8797 aaKnown RBP2.46□□□□□ -2.02
CCDC47-205ENST00000582331 MUC5BQ9HC84 5762 aaPredicted RBP2.44□□□□□ -2.02
CCDC47-205ENST00000582331 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
CCDC47-205ENST00000582331 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.03
CCDC47-205ENST00000582331 LUZP6Q538Z0 58 aa2.38□□□□□ -2.03
CCDC47-205ENST00000582331 KRTAP6-1Q3LI64 71 aa2.27□□□□□ -2.05
CCDC47-205ENST00000582331 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
CCDC47-205ENST00000582331 LCE1BQ5T7P3 118 aa2.27□□□□□ -2.05
CCDC47-205ENST00000582331 MT1AP04731 61 aa2.26□□□□□ -2.05
CCDC47-205ENST00000582331 KRTAP6-2Q3LI66 62 aa2.23□□□□□ -2.05
CCDC47-205ENST00000582331 INE1O15225 51 aa2.04□□□□□ -2.08
CCDC47-205ENST00000582331 LCE3DQ9BYE3 92 aa2.02□□□□□ -2.09
CCDC47-205ENST00000582331 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
CCDC47-205ENST00000582331 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
CCDC47-205ENST00000582331 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
CCDC47-205ENST00000582331 PRM1P04553 51 aa1.57□□□□□ -2.16
CCDC47-205ENST00000582331 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
CCDC47-205ENST00000582331 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 13.6 ms