RNA–Protein interactions for RNA: ENST00000581204.1

SUPT4H1-206, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-206ENST00000581204 CDC42SE1Q9NRR8 79 aa3.8□□□□□ -1.8
SUPT4H1-206ENST00000581204 A0A0D9SG42 100 aa3.79□□□□□ -1.8
SUPT4H1-206ENST00000581204 KRTAP10-5P60370 271 aa3.79□□□□□ -1.8
SUPT4H1-206ENST00000581204 KRTAP10-7P60409 375 aaPredicted RBP3.78□□□□□ -1.8
SUPT4H1-206ENST00000581204 KRTAP2-1Q9BYU5 128 aa3.74□□□□□ -1.81
SUPT4H1-206ENST00000581204 SPRR2GQ9BYE4 73 aa3.73□□□□□ -1.81
SUPT4H1-206ENST00000581204 K7ERS5 55 aa3.72□□□□□ -1.81
SUPT4H1-206ENST00000581204 SPINT4Q6UDR6 99 aa3.71□□□□□ -1.82
SUPT4H1-206ENST00000581204 A6NN06 94 aa3.67□□□□□ -1.82
SUPT4H1-206ENST00000581204 KRTAP12-1P59990 96 aa3.67□□□□□ -1.82
SUPT4H1-206ENST00000581204 PRO0628Q9UI54 55 aa3.67□□□□□ -1.82
SUPT4H1-206ENST00000581204 KRTAP12-2P59991 146 aa3.66□□□□□ -1.82
SUPT4H1-206ENST00000581204 PLAC4Q8WY50 150 aa3.66□□□□□ -1.82
SUPT4H1-206ENST00000581204 KRTAP19-8Q3LI54 63 aa3.64□□□□□ -1.83
SUPT4H1-206ENST00000581204 SPRR2EP22531 72 aa3.62□□□□□ -1.83
SUPT4H1-206ENST00000581204 SPRR2BP35325 72 aa3.62□□□□□ -1.83
SUPT4H1-206ENST00000581204 SPRR2AP35326 72 aa3.62□□□□□ -1.83
SUPT4H1-206ENST00000581204 PMAIP1Q13794 54 aa3.61□□□□□ -1.83
SUPT4H1-206ENST00000581204 MT1BP07438 61 aa3.59□□□□□ -1.83
SUPT4H1-206ENST00000581204 SPRR2FQ96RM1 72 aa3.53□□□□□ -1.84
SUPT4H1-206ENST00000581204 ROMO1P60602 79 aa3.52□□□□□ -1.85
SUPT4H1-206ENST00000581204 SPRR2DP22532 72 aa3.5□□□□□ -1.85
SUPT4H1-206ENST00000581204 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
SUPT4H1-206ENST00000581204 PRO2289Q9P1D8 64 aa3.49□□□□□ -1.85
SUPT4H1-206ENST00000581204 C10orf95Q9H7T3 257 aa3.48□□□□□ -1.85
SUPT4H1-206ENST00000581204 MT1XP80297 61 aa3.46□□□□□ -1.86
SUPT4H1-206ENST00000581204 LCE3EQ5T5B0 92 aa3.46□□□□□ -1.86
SUPT4H1-206ENST00000581204 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
SUPT4H1-206ENST00000581204 DSTQ03001 7570 aaKnown RBP3.43□□□□□ -1.86
SUPT4H1-206ENST00000581204 TNP1P09430 55 aa3.43□□□□□ -1.86
SUPT4H1-206ENST00000581204 KTN1-AS1Q86SY8 53 aa3.42□□□□□ -1.86
SUPT4H1-206ENST00000581204 KRTAP25-1Q3LHN0 102 aa3.4□□□□□ -1.87
SUPT4H1-206ENST00000581204 AHNAK2Q8IVF2 5795 aa3.39□□□□□ -1.87
SUPT4H1-206ENST00000581204 KRTAP5-10Q6L8G5 202 aa3.35□□□□□ -1.87
SUPT4H1-206ENST00000581204 KRTAP8-1Q8IUC2 63 aa3.32□□□□□ -1.88
SUPT4H1-206ENST00000581204 HMCN1Q96RW7 5635 aa3.32□□□□□ -1.88
SUPT4H1-206ENST00000581204 KRTAP5-7Q6L8G8 165 aa3.28□□□□□ -1.88
SUPT4H1-206ENST00000581204 PP632Q6XCG6 107 aa3.28□□□□□ -1.88
SUPT4H1-206ENST00000581204 LCE3AQ5TA76 89 aa3.26□□□□□ -1.89
SUPT4H1-206ENST00000581204 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.24□□□□□ -1.89
SUPT4H1-206ENST00000581204 LUZP6Q538Z0 58 aa3.22□□□□□ -1.89
SUPT4H1-206ENST00000581204 SPRR5A0A1B0GTR4 108 aa3.15□□□□□ -1.91
SUPT4H1-206ENST00000581204 KRTAP12-3P60328 96 aa3.14□□□□□ -1.91
SUPT4H1-206ENST00000581204 KRTAP19-5Q3LI72 72 aa3.13□□□□□ -1.91
SUPT4H1-206ENST00000581204 MT4P47944 62 aa3.11□□□□□ -1.91
SUPT4H1-206ENST00000581204 KRTAP19-7Q3SYF9 63 aa3.07□□□□□ -1.92
SUPT4H1-206ENST00000581204 MT1EP04732 61 aa3.04□□□□□ -1.92
SUPT4H1-206ENST00000581204 MT1LQ93083 61 aa2.97□□□□□ -1.93
SUPT4H1-206ENST00000581204 KRTAP5-4Q6L8H1 288 aa2.96□□□□□ -1.94
SUPT4H1-206ENST00000581204 AHNAKQ09666 5890 aaKnown RBP2.95□□□□□ -1.94
SUPT4H1-206ENST00000581204 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
SUPT4H1-206ENST00000581204 KRTAP19-3Q7Z4W3 81 aa2.94□□□□□ -1.94
SUPT4H1-206ENST00000581204 MT1GP13640 62 aa2.92□□□□□ -1.94
SUPT4H1-206ENST00000581204 MUC5ACP98088 5654 aa2.88□□□□□ -1.95
SUPT4H1-206ENST00000581204 MUC5BQ9HC84 5762 aaPredicted RBP2.87□□□□□ -1.95
SUPT4H1-206ENST00000581204 MT1MQ8N339 61 aa2.87□□□□□ -1.95
SUPT4H1-206ENST00000581204 KRTAP5-1Q6L8H4 278 aa2.85□□□□□ -1.95
SUPT4H1-206ENST00000581204 KRTAP20-2Q3LI61 65 aa2.82□□□□□ -1.96
SUPT4H1-206ENST00000581204 KRTAP4-3Q9BYR4 195 aa2.81□□□□□ -1.96
SUPT4H1-206ENST00000581204 KRTAP5-5Q701N2 237 aaPredicted RBP2.71□□□□□ -1.98
SUPT4H1-206ENST00000581204 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
SUPT4H1-206ENST00000581204 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
SUPT4H1-206ENST00000581204 SYNE1Q8NF91 8797 aaKnown RBP2.58□□□□□ -2
SUPT4H1-206ENST00000581204 LCE1CQ5T751 118 aa2.57□□□□□ -2
SUPT4H1-206ENST00000581204 LCE1BQ5T7P3 118 aa2.57□□□□□ -2
SUPT4H1-206ENST00000581204 OBSCNQ5VST9 7968 aa2.57□□□□□ -2
SUPT4H1-206ENST00000581204 KRTAP12-4P60329 112 aa2.55□□□□□ -2
SUPT4H1-206ENST00000581204 MT1AP04731 61 aa2.54□□□□□ -2
SUPT4H1-206ENST00000581204 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
SUPT4H1-206ENST00000581204 KRTAP6-1Q3LI64 71 aa2.5□□□□□ -2.01
SUPT4H1-206ENST00000581204 KRTAP6-2Q3LI66 62 aa2.33□□□□□ -2.04
SUPT4H1-206ENST00000581204 INE1O15225 51 aa2.19□□□□□ -2.06
SUPT4H1-206ENST00000581204 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
SUPT4H1-206ENST00000581204 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
SUPT4H1-206ENST00000581204 PRM1P04553 51 aa1.83□□□□□ -2.12
SUPT4H1-206ENST00000581204 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
SUPT4H1-206ENST00000581204 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
SUPT4H1-206ENST00000581204 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 117.1 ms