RNA–Protein interactions for RNA: ENST00000573548.1

RNF213-216, Transcript of ring finger protein 213, humanhuman

TSL 2

Gene RNF213, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-216ENST00000573548 KRTAP10-7P60409 375 aaPredicted RBP5.27□□□□□ -1.57
RNF213-216ENST00000573548 KRTAP10-12P60413 245 aa5.26□□□□□ -1.57
RNF213-216ENST00000573548 KMT2DO14686 5537 aa5.22□□□□□ -1.57
RNF213-216ENST00000573548 KRTAP19-4Q3LI73 84 aa5.22□□□□□ -1.57
RNF213-216ENST00000573548 KRTAP20-1Q3LI63 56 aa5.19□□□□□ -1.58
RNF213-216ENST00000573548 MDN1Q9NU22 5596 aa5.19□□□□□ -1.58
RNF213-216ENST00000573548 KRTAP23-1A1A580 65 aa5.18□□□□□ -1.58
RNF213-216ENST00000573548 PP632Q6XCG6 107 aa5.16□□□□□ -1.58
RNF213-216ENST00000573548 KRTAP8-1Q8IUC2 63 aa5.14□□□□□ -1.59
RNF213-216ENST00000573548 SPRR2FQ96RM1 72 aa5.13□□□□□ -1.59
RNF213-216ENST00000573548 LCE3AQ5TA76 89 aa5.09□□□□□ -1.59
RNF213-216ENST00000573548 SPRR2EP22531 72 aa5.07□□□□□ -1.6
RNF213-216ENST00000573548 SPRR2BP35325 72 aa5.07□□□□□ -1.6
RNF213-216ENST00000573548 SPRR2AP35326 72 aa5.07□□□□□ -1.6
RNF213-216ENST00000573548 KTN1-AS1Q86SY8 53 aa5.06□□□□□ -1.6
RNF213-216ENST00000573548 KRTAP2-3P0C7H8 128 aa5□□□□□ -1.61
RNF213-216ENST00000573548 KRTAP2-4Q9BYR9 128 aa5□□□□□ -1.61
RNF213-216ENST00000573548 LCE1AQ5T7P2 110 aa4.97□□□□□ -1.61
RNF213-216ENST00000573548 KRTAP12-3P60328 96 aa4.95□□□□□ -1.62
RNF213-216ENST00000573548 KRTAP19-5Q3LI72 72 aa4.95□□□□□ -1.62
RNF213-216ENST00000573548 PRAC1Q96KF2 57 aa4.94□□□□□ -1.62
RNF213-216ENST00000573548 SPRR2DP22532 72 aa4.9□□□□□ -1.63
RNF213-216ENST00000573548 KRTAP19-7Q3SYF9 63 aa4.9□□□□□ -1.63
RNF213-216ENST00000573548 MT1EP04732 61 aa4.86□□□□□ -1.63
RNF213-216ENST00000573548 KRTAP2-2Q9BYT5 123 aa4.84□□□□□ -1.63
RNF213-216ENST00000573548 KRTAP2-1Q9BYU5 128 aa4.84□□□□□ -1.63
RNF213-216ENST00000573548 SVIPQ8NHG7 77 aa4.82□□□□□ -1.64
RNF213-216ENST00000573548 KRTAP15-1Q3LI76 137 aa4.81□□□□□ -1.64
RNF213-216ENST00000573548 KRTAP19-3Q7Z4W3 81 aa4.76□□□□□ -1.65
RNF213-216ENST00000573548 MT1GP13640 62 aa4.73□□□□□ -1.65
RNF213-216ENST00000573548 MT1LQ93083 61 aa4.73□□□□□ -1.65
RNF213-216ENST00000573548 LCE3CQ5T5A8 94 aa4.6□□□□□ -1.67
RNF213-216ENST00000573548 MT1MQ8N339 61 aa4.59□□□□□ -1.67
RNF213-216ENST00000573548 DSTQ03001 7570 aaKnown RBP4.57□□□□□ -1.68
RNF213-216ENST00000573548 GPR98Q8WXG9 6306 aa4.43□□□□□ -1.7
RNF213-216ENST00000573548 KRTAP4-3Q9BYR4 195 aa4.41□□□□□ -1.7
RNF213-216ENST00000573548 SPRR5A0A1B0GTR4 108 aa4.33□□□□□ -1.72
RNF213-216ENST00000573548 MT4P47944 62 aa4.29□□□□□ -1.72
RNF213-216ENST00000573548 LUZP6Q538Z0 58 aa4.28□□□□□ -1.72
RNF213-216ENST00000573548 HMCN1Q96RW7 5635 aa4.26□□□□□ -1.73
RNF213-216ENST00000573548 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.23□□□□□ -1.73
RNF213-216ENST00000573548 KRTAP9-6A8MVA2 160 aa4.21□□□□□ -1.74
RNF213-216ENST00000573548 KRTAP5-4Q6L8H1 288 aa4.2□□□□□ -1.74
RNF213-216ENST00000573548 AHNAK2Q8IVF2 5795 aa4.13□□□□□ -1.75
RNF213-216ENST00000573548 KRTAP5-5Q701N2 237 aaPredicted RBP4.13□□□□□ -1.75
RNF213-216ENST00000573548 MT1AP04731 61 aa4.05□□□□□ -1.76
RNF213-216ENST00000573548 KRTAP5-10Q6L8G5 202 aa4.05□□□□□ -1.76
RNF213-216ENST00000573548 KRTAP12-4P60329 112 aa4.04□□□□□ -1.76
RNF213-216ENST00000573548 KRTAP20-2Q3LI61 65 aa3.99□□□□□ -1.77
RNF213-216ENST00000573548 KRTAP6-1Q3LI64 71 aa3.96□□□□□ -1.78
RNF213-216ENST00000573548 KRTAP5-11Q6L8G4 156 aa3.91□□□□□ -1.78
RNF213-216ENST00000573548 KRTAP5-7Q6L8G8 165 aa3.9□□□□□ -1.79
RNF213-216ENST00000573548 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
RNF213-216ENST00000573548 NDUFAF8A1L188 74 aa3.86□□□□□ -1.79
RNF213-216ENST00000573548 MT3P25713 68 aa3.75□□□□□ -1.81
RNF213-216ENST00000573548 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.82
RNF213-216ENST00000573548 KRTAP5-2Q701N4 177 aa3.68□□□□□ -1.82
RNF213-216ENST00000573548 KRTAP5-1Q6L8H4 278 aa3.62□□□□□ -1.83
RNF213-216ENST00000573548 KRTAP5-8O75690 187 aa3.52□□□□□ -1.85
RNF213-216ENST00000573548 KRTAP4-4Q9BYR3 166 aa3.52□□□□□ -1.85
RNF213-216ENST00000573548 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
RNF213-216ENST00000573548 A0A0A0MQY5 61 aa3.48□□□□□ -1.85
RNF213-216ENST00000573548 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
RNF213-216ENST00000573548 LCE3DQ9BYE3 92 aa3.45□□□□□ -1.86
RNF213-216ENST00000573548 MUC5ACP98088 5654 aa3.44□□□□□ -1.86
RNF213-216ENST00000573548 AHNAKQ09666 5890 aaKnown RBP3.42□□□□□ -1.86
RNF213-216ENST00000573548 MUC5BQ9HC84 5762 aaPredicted RBP3.39□□□□□ -1.87
RNF213-216ENST00000573548 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.87
RNF213-216ENST00000573548 INE1O15225 51 aa3.28□□□□□ -1.88
RNF213-216ENST00000573548 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
RNF213-216ENST00000573548 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
RNF213-216ENST00000573548 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
RNF213-216ENST00000573548 PRM1P04553 51 aa2.76□□□□□ -1.97
RNF213-216ENST00000573548 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
RNF213-216ENST00000573548 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
RNF213-216ENST00000573548 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
RNF213-216ENST00000573548 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
RNF213-216ENST00000573548 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms