RNA–Protein interactions for RNA: ENST00000572686.1

SPOP-221, Transcript of speckle type BTB/POZ protein, humanhuman

Gene SPOP, Length 2,135 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-221ENST00000572686 MUC12Q9UKN1 5478 aa3.3□□□□□ -1.88
SPOP-221ENST00000572686 MT1BP07438 61 aa3.29□□□□□ -1.88
SPOP-221ENST00000572686 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
SPOP-221ENST00000572686 NEBP20929 6669 aa3.29□□□□□ -1.88
SPOP-221ENST00000572686 KRTAP2-2Q9BYT5 123 aa3.28□□□□□ -1.89
SPOP-221ENST00000572686 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
SPOP-221ENST00000572686 KRTAP19-8Q3LI54 63 aa3.26□□□□□ -1.89
SPOP-221ENST00000572686 SPRR2GQ9BYE4 73 aa3.25□□□□□ -1.89
SPOP-221ENST00000572686 KRTAP10-5P60370 271 aa3.24□□□□□ -1.89
SPOP-221ENST00000572686 PRO2289Q9P1D8 64 aa3.23□□□□□ -1.89
SPOP-221ENST00000572686 KRTAP20-1Q3LI63 56 aa3.22□□□□□ -1.89
SPOP-221ENST00000572686 KRTAP5-9P26371 169 aa3.21□□□□□ -1.9
SPOP-221ENST00000572686 KMT2DO14686 5537 aa3.19□□□□□ -1.9
SPOP-221ENST00000572686 MDN1Q9NU22 5596 aa3.19□□□□□ -1.9
SPOP-221ENST00000572686 PLAC4Q8WY50 150 aa3.15□□□□□ -1.91
SPOP-221ENST00000572686 PP632Q6XCG6 107 aa3.12□□□□□ -1.91
SPOP-221ENST00000572686 KRTAP2-3P0C7H8 128 aa3.11□□□□□ -1.91
SPOP-221ENST00000572686 LCE1EQ5T753 118 aa3.11□□□□□ -1.91
SPOP-221ENST00000572686 KRTAP2-4Q9BYR9 128 aa3.11□□□□□ -1.91
SPOP-221ENST00000572686 TNP1P09430 55 aa3.1□□□□□ -1.91
SPOP-221ENST00000572686 SPRR2FQ96RM1 72 aa3.07□□□□□ -1.92
SPOP-221ENST00000572686 SPRR2EP22531 72 aa3.06□□□□□ -1.92
SPOP-221ENST00000572686 SPRR2BP35325 72 aa3.06□□□□□ -1.92
SPOP-221ENST00000572686 SPRR2AP35326 72 aa3.06□□□□□ -1.92
SPOP-221ENST00000572686 MT1XP80297 61 aa3.05□□□□□ -1.92
SPOP-221ENST00000572686 INE1O15225 51 aa3.04□□□□□ -1.92
SPOP-221ENST00000572686 KRTAP8-1Q8IUC2 63 aa3.01□□□□□ -1.93
SPOP-221ENST00000572686 KRTAP2-1Q9BYU5 128 aa3□□□□□ -1.93
SPOP-221ENST00000572686 SPRR2DP22532 72 aa2.96□□□□□ -1.94
SPOP-221ENST00000572686 LCE3AQ5TA76 89 aa2.94□□□□□ -1.94
SPOP-221ENST00000572686 MT3P25713 68 aa2.92□□□□□ -1.94
SPOP-221ENST00000572686 KRTAP10-12P60413 245 aa2.89□□□□□ -1.95
SPOP-221ENST00000572686 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
SPOP-221ENST00000572686 SPRR5A0A1B0GTR4 108 aa2.86□□□□□ -1.95
SPOP-221ENST00000572686 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.95
SPOP-221ENST00000572686 KRTAP12-3P60328 96 aa2.82□□□□□ -1.96
SPOP-221ENST00000572686 GPR98Q8WXG9 6306 aa2.75□□□□□ -1.97
SPOP-221ENST00000572686 KRTAP9-6A8MVA2 160 aa2.74□□□□□ -1.97
SPOP-221ENST00000572686 KRTAP5-4Q6L8H1 288 aa2.74□□□□□ -1.97
SPOP-221ENST00000572686 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
SPOP-221ENST00000572686 DSTQ03001 7570 aaKnown RBP2.74□□□□□ -1.97
SPOP-221ENST00000572686 KRTAP19-5Q3LI72 72 aa2.74□□□□□ -1.97
SPOP-221ENST00000572686 KRTAP19-7Q3SYF9 63 aa2.73□□□□□ -1.97
SPOP-221ENST00000572686 KRTAP19-3Q7Z4W3 81 aa2.71□□□□□ -1.98
SPOP-221ENST00000572686 MT1EP04732 61 aa2.71□□□□□ -1.98
SPOP-221ENST00000572686 LCE3CQ5T5A8 94 aa2.68□□□□□ -1.98
SPOP-221ENST00000572686 MT1GP13640 62 aa2.63□□□□□ -1.99
SPOP-221ENST00000572686 HMCN1Q96RW7 5635 aa2.62□□□□□ -1.99
SPOP-221ENST00000572686 MT4P47944 62 aa2.6□□□□□ -1.99
SPOP-221ENST00000572686 MT1MQ8N339 61 aa2.59□□□□□ -1.99
SPOP-221ENST00000572686 MT1LQ93083 61 aa2.57□□□□□ -2
SPOP-221ENST00000572686 AHNAK2Q8IVF2 5795 aa2.57□□□□□ -2
SPOP-221ENST00000572686 KRTAP4-3Q9BYR4 195 aa2.54□□□□□ -2
SPOP-221ENST00000572686 KRTAP5-10Q6L8G5 202 aa2.54□□□□□ -2
SPOP-221ENST00000572686 LCE3EQ5T5B0 92 aa2.48□□□□□ -2.01
SPOP-221ENST00000572686 OBSCNQ5VST9 7968 aa2.46□□□□□ -2.02
SPOP-221ENST00000572686 KRTAP5-7Q6L8G8 165 aa2.45□□□□□ -2.02
SPOP-221ENST00000572686 KRTAP20-2Q3LI61 65 aa2.41□□□□□ -2.02
SPOP-221ENST00000572686 KRTAP5-5Q701N2 237 aaPredicted RBP2.39□□□□□ -2.03
SPOP-221ENST00000572686 KRTAP12-4P60329 112 aa2.34□□□□□ -2.03
SPOP-221ENST00000572686 SYNE1Q8NF91 8797 aaKnown RBP2.29□□□□□ -2.04
SPOP-221ENST00000572686 KRTAP5-2Q701N4 177 aa2.28□□□□□ -2.04
SPOP-221ENST00000572686 LCE3DQ9BYE3 92 aa2.26□□□□□ -2.05
SPOP-221ENST00000572686 KRTAP6-1Q3LI64 71 aa2.18□□□□□ -2.06
SPOP-221ENST00000572686 MT1AP04731 61 aa2.18□□□□□ -2.06
SPOP-221ENST00000572686 KRTAP5-8O75690 187 aa2.17□□□□□ -2.06
SPOP-221ENST00000572686 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
SPOP-221ENST00000572686 MUC5ACP98088 5654 aa2.12□□□□□ -2.07
SPOP-221ENST00000572686 AHNAKQ09666 5890 aaKnown RBP2.12□□□□□ -2.07
SPOP-221ENST00000572686 KRTAP6-2Q3LI66 62 aa2.11□□□□□ -2.07
SPOP-221ENST00000572686 LCE1CQ5T751 118 aa2.02□□□□□ -2.09
SPOP-221ENST00000572686 LCE1BQ5T7P3 118 aa2.02□□□□□ -2.09
SPOP-221ENST00000572686 PRM1P04553 51 aa1.83□□□□□ -2.12
SPOP-221ENST00000572686 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.13
SPOP-221ENST00000572686 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
SPOP-221ENST00000572686 KRTAP21-2Q3LI59 83 aa1.47□□□□□ -2.17
SPOP-221ENST00000572686 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
SPOP-221ENST00000572686 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms