RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 KRTAP13-1Q8IUC0 172 aa2.68□□□□□ -1.98
SF3B3-214ENST00000572365 MT1FP04733 61 aa2.67□□□□□ -1.98
SF3B3-214ENST00000572365 KRTAP10-10P60014 251 aa2.66□□□□□ -1.98
SF3B3-214ENST00000572365 KRTAP19-6Q3LI70 58 aa2.66□□□□□ -1.98
SF3B3-214ENST00000572365 KMT2DO14686 5537 aa2.66□□□□□ -1.98
SF3B3-214ENST00000572365 SPINT4Q6UDR6 99 aa2.65□□□□□ -1.99
SF3B3-214ENST00000572365 C20orf166-AS1Q96NR2 134 aa2.65□□□□□ -1.99
SF3B3-214ENST00000572365 SPINK1P00995 79 aa2.63□□□□□ -1.99
SF3B3-214ENST00000572365 Q96NJ1 140 aa2.63□□□□□ -1.99
SF3B3-214ENST00000572365 A0A1B0GU33 70 aa2.62□□□□□ -1.99
SF3B3-214ENST00000572365 MDN1Q9NU22 5596 aa2.62□□□□□ -1.99
SF3B3-214ENST00000572365 KRTAP2-3P0C7H8 128 aa2.6□□□□□ -1.99
SF3B3-214ENST00000572365 SSBP3-AS1Q7Z2R9 100 aa2.6□□□□□ -1.99
SF3B3-214ENST00000572365 KRTAP2-4Q9BYR9 128 aa2.6□□□□□ -1.99
SF3B3-214ENST00000572365 P0C880 135 aa2.59□□□□□ -1.99
SF3B3-214ENST00000572365 CRIPTQ9P021 101 aa2.59□□□□□ -1.99
SF3B3-214ENST00000572365 H1FX-AS1Q4G0G2 97 aa2.57□□□□□ -2
SF3B3-214ENST00000572365 RPL37P61927 97 aaKnown RBP2.56□□□□□ -2
SF3B3-214ENST00000572365 GPR98Q8WXG9 6306 aa2.56□□□□□ -2
SF3B3-214ENST00000572365 A0A0G2JQZ4 141 aa2.55□□□□□ -2
SF3B3-214ENST00000572365 H0YAA0 97 aa2.53□□□□□ -2
SF3B3-214ENST00000572365 PP632Q6XCG6 107 aa2.53□□□□□ -2
SF3B3-214ENST00000572365 KRTAP5-5Q701N2 237 aaPredicted RBP2.53□□□□□ -2
SF3B3-214ENST00000572365 RPS29P62273 56 aaKnown RBP2.5□□□□□ -2.01
SF3B3-214ENST00000572365 KRTAP2-1Q9BYU5 128 aa2.49□□□□□ -2.01
SF3B3-214ENST00000572365 R4GN34 69 aa2.47□□□□□ -2.01
SF3B3-214ENST00000572365 SPRR2EP22531 72 aa2.46□□□□□ -2.02
SF3B3-214ENST00000572365 SPRR2BP35325 72 aa2.46□□□□□ -2.02
SF3B3-214ENST00000572365 SPRR2AP35326 72 aa2.46□□□□□ -2.02
SF3B3-214ENST00000572365 PLAC4Q8WY50 150 aa2.43□□□□□ -2.02
SF3B3-214ENST00000572365 SPRR2FQ96RM1 72 aa2.41□□□□□ -2.02
SF3B3-214ENST00000572365 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
SF3B3-214ENST00000572365 SPRR2DP22532 72 aa2.37□□□□□ -2.03
SF3B3-214ENST00000572365 M0QZ58 72 aa2.35□□□□□ -2.03
SF3B3-214ENST00000572365 S4R3F8 94 aa2.35□□□□□ -2.03
SF3B3-214ENST00000572365 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
SF3B3-214ENST00000572365 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.03
SF3B3-214ENST00000572365 PRO2289Q9P1D8 64 aa2.34□□□□□ -2.03
SF3B3-214ENST00000572365 MT1BP07438 61 aa2.33□□□□□ -2.04
SF3B3-214ENST00000572365 INE1O15225 51 aa2.31□□□□□ -2.04
SF3B3-214ENST00000572365 DSTQ03001 7570 aaKnown RBP2.3□□□□□ -2.04
SF3B3-214ENST00000572365 A0A0D9SG42 100 aa2.29□□□□□ -2.04
SF3B3-214ENST00000572365 C10orf95Q9H7T3 257 aa2.29□□□□□ -2.04
SF3B3-214ENST00000572365 KRTAP12-1P59990 96 aa2.25□□□□□ -2.05
SF3B3-214ENST00000572365 KRTAP8-1Q8IUC2 63 aa2.25□□□□□ -2.05
SF3B3-214ENST00000572365 AHNAK2Q8IVF2 5795 aa2.22□□□□□ -2.05
SF3B3-214ENST00000572365 KRTAP19-8Q3LI54 63 aa2.21□□□□□ -2.06
SF3B3-214ENST00000572365 KRTAP13-4Q3LI77 160 aa2.21□□□□□ -2.06
SF3B3-214ENST00000572365 HMCN1Q96RW7 5635 aa2.18□□□□□ -2.06
SF3B3-214ENST00000572365 KRTAP5-10Q6L8G5 202 aa2.18□□□□□ -2.06
SF3B3-214ENST00000572365 MT4P47944 62 aa2.17□□□□□ -2.06
SF3B3-214ENST00000572365 SPRR2GQ9BYE4 73 aa2.15□□□□□ -2.07
SF3B3-214ENST00000572365 KRTAP5-7Q6L8G8 165 aa2.13□□□□□ -2.07
SF3B3-214ENST00000572365 KRTAP12-3P60328 96 aa2.11□□□□□ -2.07
SF3B3-214ENST00000572365 TNP1P09430 55 aa2.1□□□□□ -2.07
SF3B3-214ENST00000572365 MT1XP80297 61 aa2.1□□□□□ -2.07
SF3B3-214ENST00000572365 KRTAP12-4P60329 112 aa2.03□□□□□ -2.08
SF3B3-214ENST00000572365 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
SF3B3-214ENST00000572365 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
SF3B3-214ENST00000572365 KRTAP19-3Q7Z4W3 81 aa1.9□□□□□ -2.11
SF3B3-214ENST00000572365 KRTAP19-7Q3SYF9 63 aa1.87□□□□□ -2.11
SF3B3-214ENST00000572365 MT1EP04732 61 aa1.86□□□□□ -2.11
SF3B3-214ENST00000572365 KRTAP20-2Q3LI61 65 aa1.85□□□□□ -2.11
SF3B3-214ENST00000572365 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
SF3B3-214ENST00000572365 MUC5ACP98088 5654 aa1.84□□□□□ -2.11
SF3B3-214ENST00000572365 MT1MQ8N339 61 aa1.81□□□□□ -2.12
SF3B3-214ENST00000572365 MT1GP13640 62 aa1.8□□□□□ -2.12
SF3B3-214ENST00000572365 KRTAP19-5Q3LI72 72 aa1.77□□□□□ -2.13
SF3B3-214ENST00000572365 SYNE1Q8NF91 8797 aaKnown RBP1.75□□□□□ -2.13
SF3B3-214ENST00000572365 MT1LQ93083 61 aa1.72□□□□□ -2.13
SF3B3-214ENST00000572365 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
SF3B3-214ENST00000572365 KRTAP6-2Q3LI66 62 aa1.53□□□□□ -2.16
SF3B3-214ENST00000572365 KRTAP6-1Q3LI64 71 aa1.52□□□□□ -2.17
SF3B3-214ENST00000572365 MT1AP04731 61 aa1.44□□□□□ -2.18
SF3B3-214ENST00000572365 PHGR1C9JFL3 82 aa1.32□□□□□ -2.2
SF3B3-214ENST00000572365 PRM1P04553 51 aa1.32□□□□□ -2.2
SF3B3-214ENST00000572365 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
SF3B3-214ENST00000572365 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 111 ms